EY675717

Overview
NameEY675717
Unique NameEY675717
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length287
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9913 contig Csv1_Contig9913:2..288. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY675717 vs. ExPASy Swiss-Prot
Match: PRTS_SERMA (Extracellular serine protease OS=Serratia marcescens PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.883e-13
Identity = 41/99 (41.41%), Postives = 53/99 (53.54%), Query Frame = -1 
Query:    6 AGNPVYESILRSDSVAAAQQGFQQLSGEIYPAIDTMLINDSRQLRDAVGERLRH-------TPVTGESN-VWVKALGSWGKTDSRSDTAGYGTSLGGML 278
            AG+P+YES L   S    QQ  +QLSG+I+  + +  IN+SR LRD   ERLR        T +  + N  W K LGSWG      +  GY TS  G+L
Sbjct:  706 AGHPIYESFLGFTSARELQQATRQLSGQIHADMASAQINESRYLRDTATERLRQAEGRRTATDIKADDNGAWAKLLGSWGHASGNDNATGYQTSTYGVL 804
[Close]
BLAST of EY675717 vs. ExPASy Swiss-Prot
Match: PRTT_SERMA (Extracellular serine protease OS=Serratia marcescens PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.138e-11
Identity = 37/99 (37.37%), Postives = 51/99 (51.52%), Query Frame = -1 
Query:    6 AGNPVYESILRSDSVAAAQQGFQQLSGEIYPAIDTMLINDSRQLRDAVGERLRHTP--------VTGESNVWVKALGSWGKTDSRSDTAGYGTSLGGML 278
            AG+P+YES L   +    QQ  +QLSG+I+  + +  IN+SR LRD   ERLR              ++  W K LG+WG      +  GY TS  G+L
Sbjct:  706 AGHPIYESFLGFTTARELQQATRQLSGQIHADMASAQINESRYLRDTATERLRQADGRRTASDIKADDNGAWAKLLGNWGHASGNDNATGYQTSTYGVL 804
The following BLAST results are available for this feature:
BLAST of EY675717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PRTS_SERMA7.883e-1341.41Extracellular serine protease OS=Serratia marcesce... [more]
PRTT_SERMA1.138e-1137.37Extracellular serine protease OS=Serratia marcesce... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-014-C08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675717 ID=EY675717; Name=EY675717; organism=Citrus sinensis; type=EST; length=287bp
CCCGCCAGCATGCCACCCAGTGAGGTGCCGTAGCCCGCCGTGTCGCTGCG
GCTGTCGGTCTTGCCCCAACTGCCGAGCGCCTTGACCCACACATTGCTTT
CACCGGTAACCGGCGTATGGCGCAGGCGCTCGCCGACGGCATCACGTAGT
TGGCGACTATCGTTGATCAGCATGGTGTCGATGGCCGGATAGATTTCCCC
CGACAGTTGCTGGAAGCCTTGTTGCGCGGCGGCCACGGAGTCCGAACGCA
GGATGCTTTCGTACACCGGGTTGCCCGCGCCCAATTG
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