EY675707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675707 vs. ExPASy Swiss-Prot
Match: CF106_DANRE (Uncharacterized protein C6orf106 homolog OS=Danio rerio GN=zgc:101577 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14 Identity = 37/117 (31.62%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 175 PGCSRLDSCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGDRFSDGVSVEIEVPADGVPVEGEIDIAVDFTASELPGRYISYWRMSSPSRVKFGQRVWVLIQVD 525 P + F+ DV + +G + P TPFTK WR++NTG +WP G L ++GGD+F V + + + D++V + +PG Y WRM + + + +G +WV++ V+ Sbjct: 68 PNINTPSMSFVEDVTIGEGESVPPDTPFTKTWRIQNTGTESWPPGVCLKYVGGDQFGHVNMVMVR----SLDPQEISDVSVQMRSPAVPGMYQGQWRMCTATGLFYGDVIWVILSVE 180
BLAST of EY675707 vs. ExPASy Swiss-Prot
Match: NBR1_PONAB (Next to BRCA1 gene 1 protein OS=Pongo abelii GN=NBR1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.066e-12 Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 196 SCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGD-RFSDGVSVEIEVPADGVPVEGEIDIAVDFTASELPGRYISYWRMSSPSRVKFGQRVWVLIQVDP 528 S +D N+ DGT + P T F K WRM+NTGN+ W ++L ++ G+ + ++ VP G ++V+F A L G Y S+WR+S + +FG RVW I VDP Sbjct: 302 SAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVGV--VSVEFIAPALEGTYTSHWRLSHKGQ-QFGPRVWCSIIVDP 410
BLAST of EY675707 vs. ExPASy Swiss-Prot
Match: NBR1_HUMAN (Next to BRCA1 gene 1 protein OS=Homo sapiens GN=NBR1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 4.066e-12 Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 196 SCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGD-RFSDGVSVEIEVPADGVPVEGEIDIAVDFTASELPGRYISYWRMSSPSRVKFGQRVWVLIQVDP 528 S +D N+ DGT + P T F K WRM+NTGN+ W ++L ++ G+ + ++ VP G ++V+F A L G Y S+WR+S + +FG RVW I VDP Sbjct: 372 SAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVGV--VSVEFIAPALEGTYTSHWRLSHKGQ-QFGPRVWCSIIVDP 480
BLAST of EY675707 vs. ExPASy Swiss-Prot
Match: NBR1_MOUSE (Next to BRCA1 gene 1 protein OS=Mus musculus GN=Nbr1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12 Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 196 SCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGD-RFSDGVSVEIEVPADGVPVEGEIDIAVDFTASELPGRYISYWRMSSPSRVKFGQRVWVLIQVDP 528 S +D N+ DGT + P T F K WRM+NTGN+ W ++L ++ G+ + ++ VP G ++V+F A L G Y S+WR+S + +FG RVW I VDP Sbjct: 373 SAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWNTDTKLKFMWGNLTLASTEKKDVLVPCLKAGHVGV--VSVEFIAPTLEGTYTSHWRLSHKGQ-QFGPRVWCSIIVDP 481
BLAST of EY675707 vs. ExPASy Swiss-Prot
Match: CF106_CHICK (Uncharacterized protein C6orf106 homolog OS=Gallus gallus GN=RCJMB04_11e11 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12 Identity = 34/108 (31.48%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 202 FILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGDRFSDGVSVEIEVPADGVPVEGEIDIAVDFTASELPGRYISYWRMSSPSRVKFGQRVWVLIQVD 525 F+ DV + +G + P T FTK WR++NTG WP G L ++GGD+F V + + + D++V + G Y WRM + + + +G +WV++ V+ Sbjct: 77 FVEDVTIGEGESIPPDTQFTKTWRIQNTGTEVWPPGVCLKYVGGDQFGHVNMVMVR----SLEPQEIADVSVQMCSPSTAGMYQGQWRMCTATGLYYGDVIWVILSVE 180
BLAST of EY675707 vs. ExPASy Swiss-Prot
Match: NBR1_RAT (Next to BRCA1 gene 1 protein OS=Rattus norvegicus GN=Nbr1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11 Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 196 SCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGD-RFSDGVSVEIEVPADGVPVEGEIDIAVDFTASELPGRYISYWRMSSPSRVKFGQRVWVLIQVDP 528 S +D N+ DGT + P T F K WRM+NTGN+ W ++L ++ G+ + ++ VP G ++V+F A L G Y +WR+S + +FG RVW I VDP Sbjct: 374 SAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHIGV--VSVEFIAPTLEGTYTLHWRLSHKGQ-QFGPRVWCSIIVDP 482
BLAST of EY675707 vs. ExPASy Swiss-Prot
Match: CF106_HUMAN (Uncharacterized protein C6orf106 OS=Homo sapiens GN=C6orf106 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11 Identity = 35/117 (29.91%), Postives = 59/117 (50.43%), Query Frame = 1 Query: 175 PGCSRLDSCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGDRFSDGVSVEIEVPADGVPVEGEIDIAVDFTASELPGRYISYWRMSSPSRVKFGQRVWVLIQVD 525 P S F+ DV + +G + P T F K WR++N+G AWP G L ++GGD+F V + + + D++V + G Y WRM + + + +G +WV++ V+ Sbjct: 68 PNISVPSMSFVEDVTIGEGESIPPDTQFVKTWRIQNSGAEAWPPGVCLKYVGGDQFGHVNMVMVR----SLEPQEIADVSVQMCSPSRAGMYQGQWRMCTATGLYYGDVIWVILSVE 180 The following BLAST results are available for this feature:
BLAST of EY675707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675707 ID=EY675707; Name=EY675707; organism=Citrus sinensis; type=EST; length=919bpback to top |