EY675679

Overview
NameEY675679
Unique NameEY675679
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 4.024e-86
Identity = 151/199 (75.88%), Postives = 178/199 (89.45%), Query Frame = 3
Query:    3 GKPHSADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLKFNRAVPLDTLQNWLMRAPQLLDLGFGSFVNDPSSEAYIKLRATLVKCNSLKSLVGF 599
            GKPH ADFNL+P++WGG+V PW+EALA+SRVGLEELRLKRMVV+D+ LELLSRSFVNFKSLVLVSCEGFTTDGLA+IAANCR+LR+LDLQE E+DD+RGQW+SCFPD+CT+LV+LNF+CL+GE NL ALERLVARSPNLKSLK NRAVPLD L   +  APQ++DLG GS+ NDP SE+Y+KL A + KC SL+SL GF
Sbjct:   70 GKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELLSRSFVNFKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTTLVTLNFACLEGETNLVALERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSYENDPDSESYLKLMAVIKKCTSLRSLSGF 268          
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 9.277e-83
Identity = 146/199 (73.37%), Postives = 174/199 (87.44%), Query Frame = 3
Query:    3 GKPHSADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLKFNRAVPLDTLQNWLMRAPQLLDLGFGSFVNDPSSEAYIKLRATLVKCNSLKSLVGF 599
            GKPH ADFNL+P++WGG+V+PW+EALA+SRVGLEELRLKRMVV+D+ L+LLSRSF NFKSLVLVSCEGFTTDGLA+IAANCR+LRELDLQE E+DD+RGQW++CFPDSCT+L+SLNF+CLKGE N+ ALERLVARSPNLKSLK NRAVPLD L   +  APQL+DLG GS+ N+P  E++ KL   + K  SL+SL GF
Sbjct:   70 GKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDLLSRSFANFKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTTLMSLNFACLKGETNVAALERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSYENEPDPESFAKLMTAIKKYTSLRSLSGF 268          
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.319e-72
Identity = 138/231 (59.74%), Postives = 175/231 (75.76%), Query Frame = 3
Query:    3 GKPHSADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLKFNRAVPLDTLQNWLMRAPQLLDLGFGSFVNDPSSEAYIKLRATLVKCNSLKSLVGFFGGWFLAPGRL-FIPGLPKPYLP*NLTFAPGL 692
            GKPH ADFNL+P DWGG+  PW+EA A+   GLEELR+KRMVVSD+ LELL+RSF  F++LVL+SCEGF+TDGLAA+A++C+ LRELDLQE EV+D   +W+SCFPDSCTSLVSLNF+C+KGE+N  +LERLV+RSPNL+SL+ NR+V +DTL   L+R P L DLG G+  +D  +E+Y KL + L KC  L+SL GF   W  +P  L FI  L       NL++AP L
Sbjct:   70 GKPHFADFNLVPPDWGGYAGPWIEAAARGCHGLEELRMKRMVVSDESLELLARSFPRFRALVLISCEGFSTDGLAAVASHCKLLRELDLQENEVEDRGPRWLSCFPDSCTSLVSLNFACIKGEVNAGSLERLVSRSPNLRSLRLNRSVSVDTLAKILLRTPNLEDLGTGNLTDDFQTESYFKLTSALEKCKMLRSLSGF---WDASPVCLSFIYPLCAQLTGLNLSYAPTL 297          
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 3.542e-66
Identity = 127/210 (60.48%), Postives = 152/210 (72.38%), Query Frame = 3
Query:    3 GKPHSADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLKFNRAVPLDTLQNWLMRAPQLLDLGFGSFVNDPSSEAYIKLRATLVKCNSLKSLVGFFGGWFLAPGRL 632
            GKPH ADFNL+P  WGG+VYPW+EA++ S   LEE+RLKRMVV+DDCLEL+++SF NFK LVL SCEGF+TDGLAAIAA CR L+ELDL+E +VDD  G W+S FPD+ TSLVSLN SCL  E++ +ALERLV R PNLKSLK NRAVPL+ L   L RAPQL +LG G +  +   + Y  L   L  C  L+ L GF   W   P  L
Sbjct:   75 GKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGF---WDAVPAYL 281          
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: GRH1_ARATH (GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.793e-60
Identity = 123/230 (53.48%), Postives = 154/230 (66.96%), Query Frame = 3
Query:    3 GKPHSADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLKFNRAVPLDTLQNWLMRAPQLLDLGFGSFVNDPSSEAYIKLRATLVKCNSLKSLVGFFGGWFLAPGRLFIPGLPKPYLP*NLTFAPGL 692
            GKPH AD+NL+P  WGG+ +PW+EA+A     LEE+R+KRMVV+D+CLE ++ SF +FK LVL SCEGF+TDG+AAIAA CR LR L+L+E  V+D  G W+S FP+S TSLVSL+FSCL  E+ ++ LERLV+RSPNLKSLK N AV LD L + L  APQL +LG GSF      EA+ KL      C  L+SL G    W + P           YLP   +  PGL
Sbjct:   71 GKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSLVSLDFSCLDSEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSFAAQLKPEAFSKLSEAFSNCKQLQSLSGL---WDVLP----------EYLPALYSVCPGL 287          
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: TIR1A_ORYSJ (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica GN=Os05g0150500 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.491e-56
Identity = 117/213 (54.93%), Postives = 145/213 (68.08%), Query Frame = 3
Query:    3 GKPHSADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCR---YLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLKFNRAVPLDTLQNWLMRAPQLLDLGFGSFVNDPSSEAYIKLRATLVKCNSLKSLVGFFGGWFLAPGRL 632
            GKPH ADF L+P  WG    PW+ A A     LEEL  KRMVV+D+CLE+++ SF NF+ L LVSC+GF+T GLAAIAA CR   +LRELDLQE E++D    W+S FP+S TSLV+LNFSCL+GE+N+T LERLV R  NLK+LK N A+PLD L + L +APQL++LG G F  D  S+ + KL A    C SL+ L    G W   P  L
Sbjct:   86 GKPHFADFGLVPPAWGAAAAPWIAAAADGWPLLEELSFKRMVVTDECLEMIAASFRNFQVLRLVSCDGFSTAGLAAIAAGCRVGRHLRELDLQENEIEDCSIHWLSLFPESFTSLVTLNFSCLEGEVNITVLERLVTRCHNLKTLKLNNAIPLDKLASLLHKAPQLVELGTGKFSADYHSDLFAKLEAAFGGCKSLRRL---SGAWDAVPDYL 295          
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.928e-54
Identity = 113/203 (55.67%), Postives = 136/203 (67.00%), Query Frame = 3
Query:   33 LPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLKFNRAVPLDTLQNWLMRAPQLLDLGFGSFVNDPSSEAYIKLRATLVKCNSLKSLVGFFGGWFLAPGRLFIP 641
            +P  WG    PWV A   +  GLEELRLKRMVV+D CL+LL+ SF N KSLVLV C+GF+TDGLA +A NCR+++ELDLQE  V+D   +W+ CFP   T L SLNFSCL GE+N  ALE LVARSPNL+SL+ NR+VPLD L   L R P+L+DL  GSFV      AY  L  +   C+ LKSL GF+         LFIP
Sbjct:   75 VPAGWGAAARPWVAACVAACPGLEELRLKRMVVTDGCLKLLACSFPNLKSLVLVGCQGFSTDGLATVATNCRFMKELDLQESLVEDRDSRWLGCFPKPSTLLESLNFSCLTGEVNSPALEILVARSPNLRSLRLNRSVPLDVLARILCRRPRLVDLCTGSFVRGNIVGAYAGLFNSFQHCSLLKSLSGFWDA-----TSLFIP 272          
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.819e-47
Identity = 103/201 (51.24%), Postives = 123/201 (61.19%), Query Frame = 3
Query:    3 GKPHSADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLKFNRAVPLDTLQNWLMRAPQLLDLGFGSFVND--PSSEAYIKLRATLVKCNSLKSLVGF 599
            GKP  ADFNL+P +WG    PWV A AK+   LE++ LKRM V+DD L LL+ SF  FK L LV CEGF T G+A +A  CR L+ LDL E EV D+   WISCFP+  T L SL+F C++  IN  ALE LV RSP LK L+ NR V L+ L   ++RAPQL  LG GSF  D  P  E      A    C S+  L GF
Sbjct:  120 GKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFPGFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLSFDCVESPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNVPQGEQQPDYAAAFRACKSIVCLSGF 320          
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.117e-46
Identity = 103/201 (51.24%), Postives = 124/201 (61.69%), Query Frame = 3
Query:    3 GKPHSADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFVNFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLKGEINLTALERLVARSPNLKSLKFNRAVPLDTLQNWLMRAPQLLDLGFGSFVND--PSSEAYIKLRATLVKCNSLKSLVGF 599
            GKP  ADFNL+P DWG    PWV  +A++   LE++ LKRM V+DD L LL+ SF  FK L+LV CEGF T G++ +A  CR L+ LDL E EV D+   WISCFP+  T L SL F C++  IN  ALE LVARSP LK L+ NR V L  L   L+ APQL  LG GSF +D  P SE      A    C S+  L GF
Sbjct:  120 GKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTDDDLALLADSFPGFKELILVCCEGFGTSGISIVANKCRKLKVLDLIESEVTDDEVDWISCFPEDVTCLESLAFDCVEAPINFKALEGLVARSPFLKKLRLNRFVSLVELHRLLLGAPQLTSLGTGSFSHDEEPQSEQEPDYAAAFRACKSVVCLSGF 320          
BLAST of EY675679 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.612e-18
Identity = 52/145 (35.86%), Postives = 85/145 (58.62%), Query Frame = 3
Query:    3 GKPHSADFNLLPYDWGGWVYPWVEALAKSRVGLEELRLKRMVVSDDCLELLSRSFV-NFKSLVLVSCEGFTTDGLAAIAANCRYLRELDLQEIEVDDNRGQWISCFPDSCTSLVSLNFSCLK-GEINLTALERLVARSPNLKSLK 431
            GKP +A FNL+P +WGG+V PWV  ++ +   L+ +  +RM+VSD  L+ L+++   + ++L L  C GFTTDGL +I  +CR ++ L ++E    +  G+W+       TSL  LNF   +  +I+   LE +     +L S+K
Sbjct:   82 GKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVK 226          
The following BLAST results are available for this feature:
BLAST of EY675679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
AFB2_ARATH4.024e-8675.88Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis tha... [more]
AFB3_ARATH9.277e-8373.37Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis tha... [more]
TIR1B_ORYSJ4.319e-7259.74Transport inhibitor response 1-like protein Os04g0... [more]
TIR1_ARATH3.542e-6660.48Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidop... [more]
GRH1_ARATH3.793e-6053.48GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH... [more]
TIR1A_ORYSJ1.491e-5654.93Transport inhibitor response 1-like protein Os05g0... [more]
TIRC_ORYSJ6.928e-5455.67Transport inhibitor response 1-like protein Os11g0... [more]
FBX14_ARATH2.819e-4751.24F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX... [more]
TIR1L_ARATH3.117e-4651.24Transport inhibitor response 1-like protein OS=Ara... [more]
COI1_ARATH1.612e-1835.86Coronatine-insensitive protein 1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-G10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675679 ID=EY675679; Name=EY675679; organism=Citrus sinensis; type=EST; length=884bp
AGGGGAAGCCGCATTCTGCGGACTTCAACTTGCTTCCGTATGACTGGGGC
GGGTGGGTGTACCCGTGGGTCGAAGCTTTGGCTAAGAGTCGGGTCGGGTT
AGAGGAGTTGAGATTGAAGAGGATGGTAGTGTCTGATGACTGTCTTGAGT
TGCTGTCGAGGTCGTTTGTGAATTTTAAGTCGCTGGTTCTTGTTAGCTGT
GAGGGGTTTACCACTGATGGATTGGCTGCTATTGCTGCCAATTGTAGGTA
TCTTAGGGAGCTTGACTTGCAAGAAATTGAAGTAGATGATAATAGAGGAC
AGTGGATTAGCTGCTTTCCTGATAGCTGCACCTCTCTTGTCTCCCTGAAT
TTCTCATGCCTCAAAGGAGAAATTAATTTGACAGCCCTTGAGAGACTTGT
AGCAAGGTCTCCTAATCTCAAAAGTTTGAAGTTTAATCGGGCAGTGCCTC
TTGACACCCTCCAAAATTGGTTGATGCGAGCTCCTCAACTATTAGACTTA
GGCTTCGGCTCTTTTGTTAATGATCCATCTTCTGAGGCCTACATCAAATT
GAGGGCTACCCTTGTGAAGTGTAATTCATTAAAAAGTTTGGTCGGGTTTT
TTGGAGGTTGGTTCCTGGCTCCTGGTCGGCTATTCATCCCTGGTTTGCCA
AAACCTTACCTTCCTTGAAATCTAACCTTTGCCCCGGGGCTTTTCTTGGT
TAAGAGGCTTAAAAAGCTAATTTTGGGTCTTGCGGGGAAACTTTGAGCGG
TTTAGGGGAATCTGGGATTTCCTTTGGGAAAACCAGGGGGTATAAGGTTT
TTGTGCTTTTTTCCCTAGGTAAAAAAATTTAGAAAAAATTGGGGGGGGTG
TTTCCCCCTCCGGGGGGGGGCGAGAACTCAGCGG
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