EY729093

Overview
NameEY729093
Unique NameEY729093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10757 contig Csv1_Contig10757:4..725. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
[Close]
BLAST of EY729093 vs. ExPASy Swiss-Prot
Match: DC4C_ACIAD (4-carboxymuconolactone decarboxylase OS=Acinetobacter sp. (strain ADP1) GN=pcaC PE=4 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27
Identity = 49/93 (52.69%), Postives = 76/93 (81.72%), Query Frame = 3 
Query:   27 HSEFQEMITRHAWGDIWTRPGLPRHTRSLITIAMLIGMNRSEELKLHLRAAASNGVTRAEIKEVLMQSAIYCGIPAANATFHLAESVWDELGV 305
            + +FQ  I+R AWG++W+RPGLPRHTRSL+TIA+L+ + R +EL++HLRA  +NGVT+ E+KE+++  ++Y G+PA+NA  H+AE V+ +LG+
Sbjct:   34 NQDFQNFISRFAWGEVWSRPGLPRHTRSLVTIAVLLALGREDELRMHLRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEVFKDLGI 126
The following BLAST results are available for this feature:
BLAST of EY729093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DC4C_ACIAD2.295e-2752.694-carboxymuconolactone decarboxylase OS=Acinetobac... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-D12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729093 ID=EY729093; Name=EY729093; organism=Citrus sinensis; type=EST; length=721bp
CGCAGCCTCAACGCCCTGACCGAATTCACAGCGAGTTCCAGGAAATGATC
ACCCGCCACGCCTGGGGTGATATCTGGACCCGCCCGGGCCTGCCGCGGCA
TACCCGCAGCCTGATCACCATCGCCATGCTGATCGGCATGAACCGCAGCG
AAGAGCTGAAGCTGCACCTGCGCGCCGCCGCGAGCAACGGCGTGACCCGC
GCCGAGATCAAGGAAGTGCTGATGCAGAGCGCGATCTATTGCGGGATCCC
GGCGGCGAATGCGACGTTTCATTTGGCTGAGTCGGTGTGGGATGAGTTGG
GGGTTGAATCGCGCGATCCAGCCTGATTGAACCCCCGCAGGACGCGTCTG
CTAGGTGTACTGGGTGCGTAACGGGCGTCCCATTTCCTCTCGGAGAGCAT
TTTCCGTAAAGGGCTTGGGATTGGTTGTCGTGGGTTCGGTTGATCGATGA
TTGTCGAAGTCAAAAGGCAGCGCAACCGTAGGCAGGCCTACAGCTTGCCG
TTCGGCGTTGGGTTCGCCGCCGGGGTTCTCCGGGATGCCGGTATCGCCTT
CGAGAAAGGTTCCCGTGGCACCGTTATAGGCATGGGCCATTTCATGGTAG
AGGGCGTNGACTGGGGCGCTGTCTTCATCCANTGAGTANGAGGGGTTGTA
NTGTATTTCCCGCCCGTACCGGCCGCTCTANAGGATCCAGCCTACTACGC
TGCTGCGAGCACACCCTCTCC
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