EY675628

Overview
NameEY675628
Unique NameEY675628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675628 vs. ExPASy Swiss-Prot
Match: URAA_PASMU (Probable uracil permease OS=Pasteurella multocida GN=uraA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.579e-20
Identity = 63/184 (34.24%), Postives = 91/184 (49.46%), Query Frame = -1
Query:   39 GAQMLLVPFGALVLMPLITRFSFQTSPCLPQAWAPCFSKWSPGANSRCSWRRALRLSPRIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGVFRLVPIISGVLMGVAMSFYFG 590
            G QML V FGALVL+PLIT  +  T+  L         +   G         +      I      +G+A TMGG++  G VY  L   VKIKG G + +               + +AP+A +MA+GK    +    Y  A+ +SM  LLTTL VAVF KG+ +L+PI+ G+++G  +  + G
Sbjct:   21 GLQMLFVAFGALVLVPLITGLNANTA-LLTAGIGTLLFQLCTGRQVPIFLASSFAFIAPIQYGVTTWGIATTMGGLVFTGLVYFALSTLVKIKGAGALQKVFPPVVVGPVIIIIGMGLAPVAVDMALGK----NSTYQYNDAVFVSMATLLTTLGVAVFAKGMMKLIPIMFGIVVGYILCLFLG 199          
BLAST of EY675628 vs. ExPASy Swiss-Prot
Match: URAA_HAEIN (Probable uracil permease OS=Haemophilus influenzae GN=uraA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.374e-18
Identity = 63/188 (33.51%), Postives = 90/188 (47.87%), Query Frame = -1
Query:   39 RSCSGAQMLLVPFGALVLMPLITRFSFQTSPCLPQAWAPCFSKWSPGANSRCSWRRALRLSPRIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGVFRLVPIISGVLMGVAMSFYFG 602
            +S  G QML V FGALVL+PLIT     T+  L         ++  G         +      I      +G+A TMGG+   G VY  L   VK++G   + R               + +APIA +M++GK    +    Y  A+L+SM  LLTTL VAVF KG+ +L+PI+ G+  G  +  + G
Sbjct:   18 QSFVGLQMLFVAFGALVLVPLITGLDSNTA-LLTAGVGTLLFQFCTGKQVPIFLASSFAFIAPIQYGVQTWGIATTMGGLAFTGLVYFALSTLVKLRGAEALQRFFPPVVVGPVIIIIGMGLAPIAVDMSLGK----NSAYAYNDAVLVSMVTLLTTLSVAVFAKGLMKLIPIMFGITAGYILCLFLG 200          
BLAST of EY675628 vs. ExPASy Swiss-Prot
Match: PYRP_BACSU (Uracil permease OS=Bacillus subtilis GN=pyrP PE=1 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 1.460e-14
Identity = 38/121 (31.40%), Postives = 59/121 (48.76%), Query Frame = -1
Query:   63 LSPRIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGVFRLVPIISGVLMG 425
            +SP IIL K   G  A M G   AG VY  + L ++  GTG++ +               L +A  A NMAM    + SEL++      ++   L  T+I A+F +G   L+P++ G++ G
Sbjct:   78 ISP-IILVKATGGPGAAMVGAFLAGLVYGLIALLIRQLGTGWLMKILPPVVVGPVIIVIGLGLASTAVNMAMYADPNASELVYSLKHFSVAGVTLAITIICAIFLRGFLSLIPVLIGIIGG 197          

HSP 2 Score: 41.5874 bits (96), Expect = 1.460e-14
Identity = 19/36 (52.78%), Postives = 26/36 (72.22%), Query Frame = -3
Query:  415 PNVALFTAGLGTLFFQVVTGRQFPVFLASSSAFITP 522
            P VAL T+G+GTL + ++T  Q P +L SS AFI+P
Sbjct:   45 PAVALVTSGIGTLAYLLITKGQIPAYLGSSFAFISP 80          
The following BLAST results are available for this feature:
BLAST of EY675628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
URAA_PASMU5.579e-2034.24Probable uracil permease OS=Pasteurella multocida ... [more]
URAA_HAEIN1.374e-1833.51Probable uracil permease OS=Haemophilus influenzae... [more]
PYRP_BACSU1.460e-1431.40Uracil permease OS=Bacillus subtilis GN=pyrP PE=1 ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-B07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675628 ID=EY675628; Name=EY675628; organism=Citrus sinensis; type=EST; length=950bp
CCGGGGCGGGTCCGGGTCCGGGAATTCCGGGTCGACTACCCGAAGTAGAA
CGACATGGCGACCCCCATCAGCACGCCGGAGATGATCGGCACCAGGCGGA
AAACGCCTTTGCCGAATACCGCCACGATCAATGTGGTCAGCAGCGCCGGC
ATCGAGATCAGCATGGCGGTTTGGTAGTGGATCAACTCGCTACCGTCACC
CGCCTTGCCCATCGCCATGTTGGCGGCAATCGGCGCCATGGCCAGGCCGA
TGGAGATAATCACCGGCCCGATCACCACCGGCGGCAGCAGCCGGTCGATG
AAACCGGTGCCCTTGATCTTCACCGCCAGCCCCAGGAAGGTGTAAACGAA
ACCTGCCGCCATCACGCCGCCCATGGTCGCCGCGAGGCCGAATTGGCCTT
TGGCGAGAATGATCCGGGGTGATAAACGCAGAGCTCGACGCCAGGAACAC
CGGGAATTGGCGCCCGGTGACCACTTGGAAAAACAAGGTGCCCAAGCCTG
CGGTAAACAGGGCGACGTTTGGAATGAAAAACGGGTGATCAGCGGCATCA
ACACCAGCGCGCCAAATGGCACCAAGAGCATCTGTGCGCCCGAACAGGAT
CTGGCGCCCAAACGGGCCCGTTAAAATCAACCTGGAAGAGACACCGCTCC
TTTCCAGATTAGAAACAAAAAAAATATGCCGCAGGACTAGCCCAAAGGCC
AGGGGGAAGGTTAACCAGAGTAAGTTTGGAGGGTATATGAACAAGGAGGG
AAGGGGAATAATAAGAAGGAACGGGTAGAGATTTCTGACAAAACGGAGAG
AAACGACTTACGGCACAAAATAAACAAGCAGACCAACGCGAAATACAAAT
ATTGACACCAATAAGTTAAGTAAAGAAGGCGAGCAAGGCGCAGGACACAG
AAAAATGGGAGAACAAGGGGGGAAAAACAATCCAAGGAAGATAAAAAAAA
back to top