EY675606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675606 vs. ExPASy Swiss-Prot
Match: RD23C_ARATH (Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana GN=RAD23-3 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23 Identity = 50/76 (65.79%), Postives = 67/76 (88.16%), Query Frame = 1 Query: 154 IFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVCPAAQRMLIYQGKVLKDDTALEESKVAEKSFVVVRLSREE 381 IFVKTLKGT F++EVKPED+V DVK IE+VQG+DV PAA++MLI+QGKVLKD+T +EE+KVAE SF+V+ +++ + Sbjct: 3 IFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEENKVAENSFIVIMMNKSK 78
BLAST of EY675606 vs. ExPASy Swiss-Prot
Match: RD23D_ARATH (Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana GN=RAD23-4 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18 Identity = 46/74 (62.16%), Postives = 61/74 (82.43%), Query Frame = 1 Query: 154 IFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVCPAAQRMLIYQGKVLKDDTALEESKVAEKSFVVVRLSR 375 IFVKTL G++F++EVKP D V DVK IETV+G++ PAA++MLI+QGKVLKD+T LEE+ V E SF+V+ LS+ Sbjct: 3 IFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEY-PAAKQMLIHQGKVLKDETTLEENNVVENSFIVIMLSK 75
BLAST of EY675606 vs. ExPASy Swiss-Prot
Match: RAD23_ORYSJ (Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 154 IFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVCPAAQRMLIYQGKVLKDDTALEESKVAEKSFVVVRL 369 I VKTLKG++F +EV V DVK IET QG + PA Q+MLI+QGKVLKDDT L+E+KV E SF+V+ L Sbjct: 3 ISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLDENKVLENSFLVIML 74
BLAST of EY675606 vs. ExPASy Swiss-Prot
Match: RD23A_ARATH (Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15 Identity = 39/74 (52.70%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 160 VKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVCPAAQRMLIYQGKVLKDDTALEESKVAEKSFVVVRLSREE 381 VKTLKG+ F++ V P DT+ VK IE QG D P Q++LI+ GKVLKD+T+L E+KV E+ F+VV LS+ + Sbjct: 5 VKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSKSK 78
BLAST of EY675606 vs. ExPASy Swiss-Prot
Match: RD23B_ARATH (Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana GN=RAD23-2 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.591e-14 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 160 VKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVCPAAQRMLIYQGKVLKDDTALEESKVAEKSFVVVRLSREE 381 VKTLKG+ F++ V P DT+ VK IE Q D P Q++LI+ GKVLKD+T L E+KV E+ F+VV LS+ + Sbjct: 5 VKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVMLSKSK 78
BLAST of EY675606 vs. ExPASy Swiss-Prot
Match: RD23B_RAT (UV excision repair protein RAD23 homolog B OS=Rattus norvegicus GN=Rad23b PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13 Identity = 35/74 (47.30%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 154 IFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVCPAAQRMLIYQGKVLKDDTALEESKVAEKSFVVVRLSR 375 + +KTL+ +F +++ PE+TV +K KIE+ +G D P A + LIY GK+L DDTAL+E K+ EK+FVVV +++ Sbjct: 3 VTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALKEYKIDEKNFVVVMVTK 76
BLAST of EY675606 vs. ExPASy Swiss-Prot
Match: RD23B_MOUSE (UV excision repair protein RAD23 homolog B OS=Mus musculus GN=Rad23b PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13 Identity = 35/74 (47.30%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 154 IFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVCPAAQRMLIYQGKVLKDDTALEESKVAEKSFVVVRLSR 375 + +KTL+ +F +++ PE+TV +K KIE+ +G D P A + LIY GK+L DDTAL+E K+ EK+FVVV +++ Sbjct: 3 VTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALKEYKIDEKNFVVVMVTK 76
BLAST of EY675606 vs. ExPASy Swiss-Prot
Match: RD23B_HUMAN (UV excision repair protein RAD23 homolog B OS=Homo sapiens GN=RAD23B PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.393e-13 Identity = 35/74 (47.30%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 154 IFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVCPAAQRMLIYQGKVLKDDTALEESKVAEKSFVVVRLSR 375 + +KTL+ +F +++ PE+TV +K KIE+ +G D P A + LIY GK+L DDTAL+E K+ EK+FVVV +++ Sbjct: 3 VTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTK 76
BLAST of EY675606 vs. ExPASy Swiss-Prot
Match: RD23B_BOVIN (UV excision repair protein RAD23 homolog B OS=Bos taurus GN=RAD23B PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.870e-12 Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 154 IFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVCPAAQRMLIYQGKVLKDDTALEESKVAEKSFVVVRLSR 375 + +KTL+ +F +++ P++TV +K KIE+ +G D P A + LIY GK+L DDTAL+E K+ EK+FVVV +++ Sbjct: 3 VTLKTLQQQTFKIDIDPDETVRALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTK 76 The following BLAST results are available for this feature:
BLAST of EY675606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675606 ID=EY675606; Name=EY675606; organism=Citrus sinensis; type=EST; length=787bpback to top |