EY675601

Overview
NameEY675601
Unique NameEY675601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675601 vs. ExPASy Swiss-Prot
Match: 7SBG2_SOYBN (Basic 7S globulin 2 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.293e-20
Identity = 68/195 (34.87%), Postives = 97/195 (49.74%), Query Frame = 3 
Query:  111 LVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAKXXXXXXXXXXP-----------DNPISNTGTHGDIRIDVLSIQSTDG--RNPGRAVTVPNFIFLCGFKFVLQ-GLANGVGGIAGLGRSKLRCLSKLAAAF--SHQKNSHFA*IFLKEGASFFGKGTLN 647
            LVL V  D +T  +   +++RTPL+ V + V L GN LWV+CE+ Y S T +   C S QC+ AN            P            NPI+     G++  DVL+I +T G  +  G  VTVP F+F C   F+LQ GL   + G+AGLG + +   ++LA+ F   HQ  +  +     +GA  FG    N
Sbjct:   41 LVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLLQKGLPRNIQGVAGLGHAPISLPNQLASHFGLQHQFTTCLSRYPTSKGALIFGDAPNN 235
[Close]
BLAST of EY675601 vs. ExPASy Swiss-Prot
Match: 7SB1_SOYBN (Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.356e-18
Identity = 60/171 (35.09%), Postives = 88/171 (51.46%), Query Frame = 3 
Query:  111 LVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAKXXXXXXXXXXP-----------DNPISNTGTHGDIRIDVLSIQSTDG--RNPGRAVTVPNFIFLCGFKFVLQ-GLANGVGGIAGLGRSKLRCLSKLAAAFSHQK 581
            +VL V  D +T  +   +++RTPL+ V + V L GN LWV+CE+ Y S T +   C S QC+ AN            P            NPI+     G++  DVL+I +T G  +  G  VTVP F+F C   F++Q GL     G+AGLG + +   ++LA+ F  Q+
Sbjct:   34 VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQR 204
The following BLAST results are available for this feature:
BLAST of EY675601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
7SBG2_SOYBN4.293e-2034.87Basic 7S globulin 2 OS=Glycine max PE=1 SV=1[more]
7SB1_SOYBN2.356e-1835.09Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-G06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675601 ID=EY675601; Name=EY675601; organism=Citrus sinensis; type=EST; length=953bp
CCACGCGTCCGATAAACATGTCGGTCGCACAGAGTTTCCTTCTTTTATGC
TCTCTTCTTATTTTCTCGTTATCTCCCATCACAGCCCAAACATCATTCCG
CCCCAAAGCCCTGGTTCTCCGAGTAGCAAAAGACACTGCCACTCTTCAAT
ATGTGACCCAAATCAAGCAAAGAACCCCTCTTGTGCCTGTGAAATTAACT
GTCCATCTTGGCGGTAACATTCTCTGGGTTGATTGCGAGAAAGGCTACGT
GTCATCTACCAATAAAACAGCCCGCTGTGGCTCAGCTCAGTGCAATCTTG
CTAATGCTAAAGCTTGTGGAGGTGGCATTTGTGGCGCTGGCCCAGATAAC
CCCATCTCAAACACTGGGACACATGGTGACATACGCATAGATGTTTTGTC
CATCCAGTCTACCGACGGCCGTAATCCTGGTAGAGCTGTTACGGTGCCTA
ATTTTATCTTCCTTTGTGGGTTCAAATTTGTCTTACAAGGCCTTGCTAAT
GGCGTTGGGGGTATTGCTGGCCTTGGAAGGAGTAAATTGCGTTGCCTTTC
AAAACTTGCTGCTGCTTTTAGCCACCAAAAAAATTCGCACTTTGCATGAA
TCTTTTTGAAAGAGGGGGCATCGTTTTTTGGCAAGGGAACCTTAAATGAA
TTTTAATAAATTCGAAGTTCCGCAAAAAGCCTAAAAAAAACCCCCGTTTT
TAACAAAAAAAGGAAAAAAGGGCCCCCAGGGTATCATGGGGGGGACCCTA
AGTTGTAAAACAAAATGAATTGGGGGGATCCTATCCCGTTTATAGTGTGA
AAAGAAAAGGGGCCAACCCATATACAACAAAAAAAAATTGGCGTGTTCAA
ATGAGAAAAAAGGAAGGGGGGGGATGGAGGGGGGAAAAAAAAATAACTAC
GCACAACTGAGAACAAACACATGTTAAATCAAATCACCGGGAAGAAAACA
TTT
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