EY675564

Overview
NameEY675564
Unique NameEY675564
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1043
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 2.379e-91
Identity = 162/200 (81.00%), Postives = 173/200 (86.50%), Query Frame = 2
Query:    2 APSGNALSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            +PS + ++  G+++MRKT SK+  VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG R AG PLGEV DPLYP            P AFAEL+VKEIK GR
Sbjct:   21 SPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 220          
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 3.107e-91
Identity = 162/200 (81.00%), Postives = 173/200 (86.50%), Query Frame = 2
Query:    2 APSGNALSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            +PS + ++  G+++MRKT SK+  VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG R AG PLGEV DPLYP            P AFAEL+VKEIK GR
Sbjct:   20 SPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 219          
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 4.058e-91
Identity = 160/198 (80.81%), Postives = 170/198 (85.86%), Query Frame = 2
Query:    2 APSGNALSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            +PS   ++  GR+SMRKT +K V+S SPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEG R AG PLGEV DPLYP            P AFAEL+VKEIK GR
Sbjct:   21 SPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 218          
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 5.300e-91
Identity = 161/198 (81.31%), Postives = 169/198 (85.35%), Query Frame = 2
Query:    2 APSGNALSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            +PS + +S  GRI+MRK  +KS  S SPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG R AG PLGEV DPLYP            P AFAEL+VKEIK GR
Sbjct:   21 SPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 218          
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 6.921e-91
Identity = 161/200 (80.50%), Postives = 172/200 (86.00%), Query Frame = 2
Query:    2 APSGNALSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            +PS + ++  GR++MRKT +K+   SSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG R AG PLGEV DPLYP            P AFAEL+VKEIK GR
Sbjct:   21 SPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 220          
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 6.921e-91
Identity = 161/200 (80.50%), Postives = 173/200 (86.50%), Query Frame = 2
Query:    2 APSGNALSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            +PS + ++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG R AG PLGEV DPLYP            P AFAEL+VKEIK GR
Sbjct:   20 SPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 219          
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 6.921e-91
Identity = 159/198 (80.30%), Postives = 170/198 (85.86%), Query Frame = 2
Query:    2 APSGNALSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            +P+   +    + +MRKT SKSVSSGSPWYGPDRVKYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG R AG PLGEVTDP+YP            P AFAEL+VKE+K GR
Sbjct:   11 SPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGR 208          
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 2.630e-90
Identity = 161/200 (80.50%), Postives = 172/200 (86.00%), Query Frame = 2
Query:    2 APSGNALSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            +PS + ++  G+  MRKT +K+  VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EG R AG PLGEVTDPLYP            P AFAEL+VKEIK GR
Sbjct:   21 SPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 220          
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 9.995e-90
Identity = 159/200 (79.50%), Postives = 172/200 (86.00%), Query Frame = 2
Query:    2 APSGNALSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            +PS + ++  G+++MRKT +K+  +SSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG R AG PLGEV DPLYP            P AFAEL+VK IK GR
Sbjct:   21 SPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGR 220          
BLAST of EY675564 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.705e-89
Identity = 160/199 (80.40%), Postives = 170/199 (85.43%), Query Frame = 2
Query:    5 PSGNALSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGNRNAGXPLGEVTDPLYPXXXXXXXXXXXXPXAFAELRVKEIKKGR 595
            PS + ++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEG R AG PLGEV DPLYP            P AFAEL+VKEIK GR
Sbjct:   21 PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 219          
The following BLAST results are available for this feature:
BLAST of EY675564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
CB24_TOBAC2.379e-9181.00Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC3.107e-9181.00Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB22_TOBAC4.058e-9180.81Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB2B_SOLLC5.300e-9181.31Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB2G_SOLLC6.921e-9180.50Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB25_NICPL6.921e-9180.50Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB21_CUCSA6.921e-9180.30Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB27_TOBAC2.630e-9080.50Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB25_TOBAC9.995e-9079.50Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB24_PETSP1.705e-8980.40Chlorophyll a-b binding protein 25, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-C07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675564 ID=EY675564; Name=EY675564; organism=Citrus sinensis; type=EST; length=1043bp
CGCCCCTTCAGGCAATGCCCTGAGCAATGGTGGCCGCATCTCCATGCGTA
AAACCGGGAGCAAGTCTGTTTCTTCAGGTAGCCCGTGGTACGGCCCGGAC
AGAGTCAAGTACTTGGGCCCACTCTCTGGCGAGCCCCCAAGCTACTTGAC
TGGTGAGTTCCCTGGCGACTACGGTTGGGACACTGCCGGGCTTTCAGCTG
ACCCAGAAACCTTTGCCAAGAACCGTGAACTCGAAGTCATCCACTGCAGA
TGGGCCATGTTGGGAGCTCTTGGATGCGTCTTCCCGGAGCTCTTGGCCCG
CAACGGAGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCGGGAGCTCAGA
TCTTCAGCGAGGGCGGGCTTGACTACTTGGGAAACCCAAGCTTGATCCAC
GCCCAGAGCATCTTGGCCATCTGGGCTTGCCAGGTGGTCTTGATGGGAGC
CGTAGAAGGAAACAGAAATGCTGGANGGCCGCTCGGTGAAGTGACTGACC
CATTGTACCCNNNNNNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCN
NAGGCTTTTGCTGAACTCAGGGTTAAGGAAATCAAAAAAGGAAGGGGTGG
CTTATGTTCTCCAGGTTTGGTTTTTTCCTTTAGGGCCATTTGGTCCCCGG
CAAAGGGGAACCGTTAAAAAAAATTGGGCGAAACACTTTGGCGGAAACCC
CTGTCAAAAAAAAATGGCCCGGGGGCCTACCCCCCCCAAACTTTTTCTCC
CCCCGGAAAAAGGGGACCTTTGGGTTGAAAAAAAATTTTTTCTCCTTTTT
CCGGTTTTCTGGGGAAAAACCCAGGGAAAACTGGTGTTGGGAGGCGCCCC
TGGGAAAAACTTTTTTTTTTTTGTTTTTTGTGATTTTTTTTTAAAAAAAA
GGGTTTTCCCTTACGCCTATCATAGACCATTGGATCGATTATTAATTGAC
TGATATAATGAATCACTTAAATGATTCATAATACAGATCATCATCAAATA
TATAGTACGATATGGGGGGCGGGGGGGCGCGGCGCCGGCCCTC
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