EY657364

Overview
NameEY657364
Unique NameEY657364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY657364 vs. ExPASy Swiss-Prot
Match: PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.829e-11
Identity = 42/120 (35.00%), Postives = 75/120 (62.50%), Query Frame = 2 
Query:   68 VSPTAAATSKGRSGSAVIWFKQDLRVDDHLGLVAAS-KYQAVVPLYVFDHRILSRYSNEM-------LELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEY 403
            V P++AA  +    +AV+WF+ DLRV D+  L +A+ +  +V+P+Y FD R   + S+          + +I ++ +LRK+L+ +GS+L++R G+ E V+ EL +E+ A +V+A  EV +
Sbjct:  105 VDPSSAAALRR---AAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSH 221
The following BLAST results are available for this feature:
BLAST of EY657364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PHR2_ARATH4.829e-1135.00Blue-light photoreceptor PHR2 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-092-B08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY657364 ID=EY657364; Name=EY657364; organism=Citrus sinensis; type=EST; length=961bp
TCTTTCTCGACCGTTGGAGTCCAATCATCGTCGGTCTCTCCGAAGCAGAT
ACAAATGCGTTTGTTGTGTTTCTCCAACAGCAGCAGCAACAAGCAAAGGC
CGAAGTGGGTCCGCTGTTATTTGGTTCAAGCAAGATCTTCGCGTGGACGA
TCATCTTGGACTTGTTGCTGCCTCCAAGTATCAGGCTGTTGTTCCTCTTT
ATGTCTTTGATCACAGGATTCTTTCTCGTTATTCCAATGAAATGCTAGAA
TTGGTTATTTTTGCTTTGGAAGACTTGAGAAAGTCATTGAAGGAACAGGG
ATCTGATCTGATGATTAGATTTGGGAGAGTAGAGAATGTCATTCGGGAGC
TCGTAGAAGAGGTGAAAGCTACCAGTGTATTTGCTGAAGAGGAGGTTGAG
TACCACCTTCACCAGATGATGGCCATTGTGGATGAAACCTTGGCAAAAGT
CTCTCTTGTAGATGGAAAACCAAAAATTTGTTTAGGGCAAAATCCATTTT
TAGAAATTAAAAATCTGAATGAACCGCCGGGGTCCCAAAACGAATTTAAA
AAACTTCAAAGGCCTCTTAATTCCCCCTTTCTGGGCCCCCAAATTTACCT
GGGGGGAAAATTTAAAACCCCAACGGGGGGAACGGGAAGAATTGGAATTT
TGAAACCGGGGCCCCCCGCCCCACATTTTTTAAGAAATTAAAAAGGGTTT
TTGGGAAAAGAAAAAACCCCGGGGAAAATTTAAAGGGAAAATGGGGGAAT
TTTGTATTAAAAAAAATTTTGTCCCCCCCAAAAAAAAAAATTTTTGAACA
AAAAAAATTTTTTTTCCAAAAGGGGGGGGGGAAAAAAAAAAAAAAAAAAA
AAAAAAAAAATTTTTTTTAAAAAAAAACCCCAAATTTTTTTTCCCCCCCC
CAAGGGGGAAAAAAAAAAAAAAAAAAAAATAAAAAATAATTTTTTTTCTT
TTTTTTTTTTT
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