EY675475

Overview
NameEY675475
Unique NameEY675475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.392e-32
Identity = 55/72 (76.39%), Postives = 62/72 (86.11%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNTSSSTGKITLSV +   +   + GVFE+
Sbjct:  234 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFES 305          

HSP 2 Score: 47.3654 bits (111), Expect = 1.392e-32
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 1
Query:  226 QPSDTDMGAKVPKDVKIQGIW 288
            QPSDTD+GAKVPKDVKIQGIW
Sbjct:  307 QPSDTDLGAKVPKDVKIQGIW 327          
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.500e-31
Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+S TGKITLSV +   +   + GVFE+
Sbjct:  231 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFES 302          

HSP 2 Score: 47.3654 bits (111), Expect = 1.500e-31
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 1
Query:  226 QPSDTDMGAKVPKDVKIQGIW 288
            QPSDTD+GAKVPKDVKIQGIW
Sbjct:  304 QPSDTDLGAKVPKDVKIQGIW 324          
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 7.315e-31
Identity = 51/72 (70.83%), Postives = 60/72 (83.33%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT++S G+ITL V K   +   + GVFE+
Sbjct:  234 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFES 305          

HSP 2 Score: 46.9802 bits (110), Expect = 7.315e-31
Identity = 19/21 (90.48%), Postives = 21/21 (100.00%), Query Frame = 1
Query:  226 QPSDTDMGAKVPKDVKIQGIW 288
            QPSDTD+GAKVPKDVKIQG+W
Sbjct:  307 QPSDTDLGAKVPKDVKIQGVW 327          
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.316e-31
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L+KEN+KNT++S G+ITL + K   +   + GVFE+
Sbjct:  233 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFES 304          

HSP 2 Score: 46.9802 bits (110), Expect = 7.316e-31
Identity = 19/21 (90.48%), Postives = 21/21 (100.00%), Query Frame = 1
Query:  226 QPSDTDMGAKVPKDVKIQGIW 288
            QPSDTD+GAKVPKDVKIQG+W
Sbjct:  306 QPSDTDLGAKVPKDVKIQGVW 326          
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.527e-31
Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRGGS GYDNA+ALPAGGRGDEE+L KENIK+ SSSTGKITLSV K   +   + GVFE+
Sbjct:  231 PSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFES 302          

HSP 2 Score: 44.669 bits (104), Expect = 9.527e-31
Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 1
Query:  226 QPSDTDMGAKVPKDVKIQGIW 288
            QPSDTD+G+K PKDVKIQGIW
Sbjct:  304 QPSDTDLGSKAPKDVKIQGIW 324          
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.103e-30
Identity = 52/72 (72.22%), Postives = 59/72 (81.94%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+S TGKIT +V K       + GVFE+
Sbjct:  234 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFES 305          

HSP 2 Score: 45.8246 bits (107), Expect = 2.103e-30
Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = 1
Query:  226 QPSDTDMGAKVPKDVKIQGIW 288
            QPSDTD+GAK PKDVKIQGIW
Sbjct:  307 QPSDTDLGAKTPKDVKIQGIW 327          
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.835e-29
Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN KN +SS G ITLSV     +   + GVF++
Sbjct:  232 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQS 303          

HSP 2 Score: 47.3654 bits (111), Expect = 3.835e-29
Identity = 20/31 (64.52%), Postives = 26/31 (83.87%), Query Frame = 1
Query:  217 QPQQPSDTDMGAKVPKDVKIQGIW*PLVEER 309
            Q  QPSDTD+GAKVPKDVKI+G+W   +E++
Sbjct:  302 QSLQPSDTDLGAKVPKDVKIEGVWYAQLEQQ 332          
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.868e-28
Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRG STGYDNA+ALPAGGRGDEE+L KEN K+ +SS GKITLSV +   +   + GVFE+
Sbjct:  230 PSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFES 301          

HSP 2 Score: 45.4394 bits (106), Expect = 1.868e-28
Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 1
Query:  226 QPSDTDMGAKVPKDVKIQGIW 288
            QPSDTD+GAK PKDVKIQG+W
Sbjct:  303 QPSDTDLGAKAPKDVKIQGVW 323          
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.542e-27
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRGGSTGYDNA ALP GGRGDEE+LAKEN+KN SSSTG ITLSV K   +   + GVFE+
Sbjct:  227 PSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES 298          

HSP 2 Score: 35.4242 bits (80), Expect = 1.542e-27
Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 1
Query:  226 QPSDTDMGAKVPKDVKIQGIW 288
            QPSDTD+ A  PKDVKIQG+W
Sbjct:  300 QPSDTDLEA--PKDVKIQGVW 318          
BLAST of EY675475 vs. ExPASy Swiss-Prot
Match: PSBO_VOLCA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Volvox carteri GN=PSBO PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.376e-21
Identity = 44/72 (61.11%), Postives = 50/72 (69.44%), Query Frame = 2
Query:    2 PSYRGPSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVPKQA*DWRGIDGVFEN 217
            PSYRG SFLDPKGRGGSTGYDNA+ALPA  R D E+L KEN+K+T +  G    SV K       I GVFE+
Sbjct:  196 PSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFES 265          

HSP 2 Score: 41.5874 bits (96), Expect = 1.376e-21
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  226 QPSDTDMGAKVPKDVKIQGIW 288
            QPSDTD+GAK PKD+KI G+W
Sbjct:  267 QPSDTDLGAKPPKDIKITGLW 287          
The following BLAST results are available for this feature:
BLAST of EY675475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PSBO_TOBAC1.392e-3276.39Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC1.500e-3173.61Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO1_ARATH7.315e-3170.83Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO2_ARATH7.316e-3169.44Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_FRIAG9.527e-3175.00Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLTU2.103e-3072.22Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SPIOL3.835e-2969.44Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_PEA1.868e-2869.44Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_WHEAT1.542e-2775.00Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_VOLCA1.376e-2161.11Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-011-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675475 ID=EY675475; Name=EY675475; organism=Citrus sinensis; type=EST; length=900bp
ACCATCATACCGTGGCCCATCCTTCTTGGACCCAAAGGGAAGGGGTGGTT
CAACTGGCTATGACAATGCTATTGCATTGCCTGCTGGCGGAAGAGGGGAT
GAGGAAGATCTCGCCAAGGAGAATATCAAGAATACTTCATCTTCAACAGG
GAAGATCACCCTCAGCGTTCCAAAGCAAGCCTGAGACTGGAGAGGTATTG
ATGGAGTGTTTGAAAACAGCCTCAGCAGCCATCTGATACTGATATGGGAG
CCAAGGTTCCAAAGGATGTTAAGATCCAAGGTATCTGGTAGCCGCTGGTT
GAAGAAAGGGGTTTTGGGGAGGGGCCTATCCTTCAATTTAAAATGAAGGT
GGGGGCGGTCGCAAAATAAAAAGTAAAAAAATGTCTGGTCAGGGTGTTAA
ACATATCAAGTGCGGGCCTCCGGGTGGGGTGGCTAGTAAGACCATGTGCG
TGAGGGTGTATGCAGAAGGTGCTTGGTCATGAAGATAAAATAAAAGAAGG
AGGAGGGGCCGAGCTAAGTTTAAATAGTATAGAATAAATGGAGGTAGCGC
ACCCTCGAGAAATATTTATTAAAAATTTTTAAGAGGGGGGGGGGGGCGGT
GAGGTTTTTTGTTTTTTAAACTTACGGTTCGTGATTGAATAAGGGGGGTG
AAAAAAAAAACCCTCTCGGTGGGGTTTTTTTTATACTCCCAACACAGAAA
ATCTTATTGTATAAACACGCCCCCCCCCAGTATAATGTGAGGAGAAAGAA
AAAAAAAAAAATAATCTCTATTCCCCCCTCTCTATTGTTTTTTTTACATG
TGTATGATTAAGATTTAGGATGGGAGGTGGGGTGTTGGTTAGTTTAATTA
TATTATTTTTATGACGCGTGGTATAAAAGAAGAAGGGAGGGGTACCCCTC
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