EY675472

Overview
NameEY675472
Unique NameEY675472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1083
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675472 vs. ExPASy Swiss-Prot
Match: HPAG_SALDU (4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase OS=Salmonella dublin GN=hpaG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.937e-15
Identity = 41/74 (55.41%), Postives = 50/74 (67.57%), Query Frame = 2 
Query:   71 RTWINGELRQDRSTKDMIFDIPYLIEYLSSFMTLQPGDMIATGTPEGLADXXXXXXXXXXXXXXXXXXNRIVSE 292
            RT++NGELRQ+ +T D+IF IP+LI YLS FMTLQPGDMIATGTP+GL+D                  N+IV E
Sbjct:  352 RTFVNGELRQEGTTADLIFSIPFLISYLSEFMTLQPGDMIATGTPKGLSDVVPGDEVVLEIKGVGRLVNQIVCE 425
[Close]
BLAST of EY675472 vs. ExPASy Swiss-Prot
Match: HPAG_ECOLX (4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase OS=Escherichia coli GN=hpaG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.937e-15
Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 2 
Query:   71 RTWINGELRQDRSTKDMIFDIPYLIEYLSSFMTLQPGDMIATGTPEGLADXXXXXXXXXXXXXXXXXXNRIVSE 292
            RT++NGELRQ  +T D+IF +P+LI YLS FMTL PGDMIATGTP+GL+D                  NRIVSE
Sbjct:  352 RTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIATGTPKGLSDVVPGDEVVVEVEGVGRLVNRIVSE 425
[Close]
BLAST of EY675472 vs. ExPASy Swiss-Prot
Match: HPCE_ECOLX (Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase OS=Escherichia coli GN=hpcE PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 4.241e-14
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 2 
Query:   71 RTWINGELRQDRSTKDMIFDIPYLIEYLSSFMTLQPGDMIATGTPEGLAD 220
            RT++NGELRQ  +T D+IF +P+LI YLS FMTL PGDMIATGTP+GL+D
Sbjct:  352 RTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIATGTPKGLSD 401
The following BLAST results are available for this feature:
BLAST of EY675472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
HPAG_SALDU2.937e-1555.414-hydroxyphenylacetate degradation bifunctional is... [more]
HPAG_ECOLX2.937e-1555.414-hydroxyphenylacetate degradation bifunctional is... [more]
HPCE_ECOLX4.241e-1470.00Homoprotocatechuate catabolism bifunctional isomer... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-011-A07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675472 ID=EY675472; Name=EY675472; organism=Citrus sinensis; type=EST; length=1083bp
GGGCGGGTACCGGGTCGGGATTCCCGGGTCGACCTCGCCGACGTGCCAGA
TCCAAGCAATCCCCATTAAGCGCACCTGGATCAACGGTGAACTGCGCCAG
GACCGCAGCACCAAGGACATGATTTTCGACATCCCGTATTTGATCGAATA
CCTGTCCAGTTTCATGACCCTGCAGCCCGGCGACATGATCGCCACCGGCA
CGCCGGAAGGCCTGGCCGATGTGGTGCCGGGAGATGAAGTGATCGTGGAA
GTGGAAGGCGTCGGCCGCCTGGTTAACCGAATTGTCAGCGAGGCGGAATT
CTTCTCCGTCCGGAAAGAGGCTTGAGCAACATGATCAAACACTGGATCAA
CGGCCGTGAAGTCGAAAGCAAAGACACCTTCATCAACTACAAACCCGGGC
CCCGGCGAAGCCATCAAGTGAAAGTGGCCAGCGTGCGGTGCCAAGGGAAG
TGGCGCAAGCCGTTGCAGCCAGCCAAGAAACCTTTTCGAAAGTGGGCAGG
CACACCGGGCCAAGGAACGTGCCCCGCCTGGAAGCGCAGACATGGCTGAA
CAGAACGAAAAAAAAGATGGCCGACGCTGGGCCGATCTGGGAAAACCCCC
GGGGACCGACCGGGCCAACCCGAGCAAACGATGAAAAGAGGTTGAAATGT
CCCCGGGAGGGTCTATCAGATTCAAATTTCTATTCTCGAAATTAAGGCAC
CGGGAGAGAGAAGGGCTAACAAATTACCAGGGTAGGGAAAAAAAGAGAGA
GAATGAACAATAAGCGACTATAGAAGGCCAGTGAAGGGAGGAGGAGAAGT
GTGGGGGATGTGAGTCTGGGGGACATAGAGCTGAGATGGGGAAAGTAGGG
CGAGCCTGAGAGAGTATAGAGTAAAAACTAAACAAACAAAAGGAGGGAAA
GATAGAGATGAAGGAGAGAGGAAAGAAGGAGAAGTAGAGAGAATGATAAA
AGGATAATAGAAGGATAAGTTAATTGGTGGAATGTAGGAAAGGCTAGAAG
AAAGATGAAAAATAAAGAGACAATCAGAGAAAAAGATAAAGAAATAAGAT
TAAACGGGATAATGACCAGGATCATAAGGTTAA
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