EY675467

Overview
NameEY675467
Unique NameEY675467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1031
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675467 vs. ExPASy Swiss-Prot
Match: NIPA2_BOVIN (Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.117e-19
Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1
Query:   22 LIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSKHAGNDDLES 336
            L +IVCV TQ+NYLN ALD FNT++V+PIYYV FT+  I  S I+FK+W       ++  + GF TI+ G FLLH  KD+    S  P +S R  + A N  L S
Sbjct:  223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLSSLP-VSFRKDEKAVNGSLSS 326          
BLAST of EY675467 vs. ExPASy Swiss-Prot
Match: NIPA2_PONAB (Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.020e-18
Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 1
Query:   22 LIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSKHAGNDDLES 336
            L +IVCV TQ+NYLN ALD FNT++V+PIYYV FT+  +  S I+FK+W       ++  + GF TI+ G FLLH  KD+    +  P +S R  + A N +L +
Sbjct:  223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLP-VSFRKDEKAMNGNLSN 326          
BLAST of EY675467 vs. ExPASy Swiss-Prot
Match: NIPA2_MOUSE (Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.020e-18
Identity = 46/103 (44.66%), Postives = 65/103 (63.11%), Query Frame = 1
Query:   28 VIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSKHAGNDDLES 336
            ++VCV TQ+NYLN ALD FNT++V+PIYYV FT+  +  S I+FK+W       ++  + GF TI+ G FLLH  KD+    +  P +S R  + A N +L S
Sbjct:  225 LVVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLP-VSFRKDEKAMNGNLSS 326          
BLAST of EY675467 vs. ExPASy Swiss-Prot
Match: NIPA2_HUMAN (Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.020e-18
Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 1
Query:   22 LIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSMSLRLSKHAGNDDLES 336
            L +IVCV TQ+NYLN ALD FNT++V+PIYYV FT+  +  S I+FK+W       ++  + GF TI+ G FLLH  KD+    +  P +S R  + A N +L +
Sbjct:  223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLP-VSFRKDEKAMNGNLSN 326          
BLAST of EY675467 vs. ExPASy Swiss-Prot
Match: NIPA4_HUMAN (Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 4.976e-17
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 1
Query:   19 TLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDLGDGSSLTPSM 291
            +LI+ + + TQ+N+LN ALD FNT++V PIYYV FT++ + +S+I+FK+W   +   I   + GFVTI+ G F+LH  KDL    +  P M
Sbjct:  330 SLILALSLSTQVNFLNRALDIFNTSLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLDISCASLPHM 420          
BLAST of EY675467 vs. ExPASy Swiss-Prot
Match: NIPA4_MOUSE (Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.448e-16
Identity = 38/81 (46.91%), Postives = 59/81 (72.84%), Query Frame = 1
Query:   19 TLIVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKDL 261
            +LI+ + ++ Q+N+LN ALD FNT++V PIYYV FT++ + +S+++FK+W   +   IV  + GFVTI+ G F+LH  KDL
Sbjct:  270 SLILGLSIIIQVNFLNRALDIFNTSLVFPIYYVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDL 350          
BLAST of EY675467 vs. ExPASy Swiss-Prot
Match: NIPA3_PONAB (Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.891e-16
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 1
Query:   25 IVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKD 258
            ++++ V TQ+NYLN ALDTFNT++V+PIYYV FTS+ +  S I+F++W       I+  + GF TI+ G FLLH  K+
Sbjct:  282 VLVLSVTTQINYLNKALDTFNTSIVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKN 359          
BLAST of EY675467 vs. ExPASy Swiss-Prot
Match: NIPA3_HUMAN (Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.226e-16
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 1
Query:   25 IVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKD 258
            ++++ V TQ+NYLN ALDTFNT++V+PIYYV FTS+ +  S I+F++W       I+  + GF TI+ G FLLH  K+
Sbjct:  282 VLVLSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKN 359          
BLAST of EY675467 vs. ExPASy Swiss-Prot
Match: NIPA3_MOUSE (Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.091e-15
Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 1
Query:   25 IVIVCVLTQMNYLNMALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILAGTFLLHKTKD 258
            ++ + V TQ+NYLN ALDTFNT++V+PIYYV FTS+ +  S I+F++W       I+  + GF TI+ G FLLH  K+
Sbjct:  282 MLALSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHAFKN 359          
The following BLAST results are available for this feature:
BLAST of EY675467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
NIPA2_BOVIN3.117e-1947.62Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2... [more]
NIPA2_PONAB2.020e-1844.76Magnesium transporter NIPA2 OS=Pongo abelii GN=NIP... [more]
NIPA2_MOUSE2.020e-1844.66Magnesium transporter NIPA2 OS=Mus musculus GN=Nip... [more]
NIPA2_HUMAN2.020e-1844.76Magnesium transporter NIPA2 OS=Homo sapiens GN=NIP... [more]
NIPA4_HUMAN4.976e-1745.05Magnesium transporter NIPA4 OS=Homo sapiens GN=NIP... [more]
NIPA4_MOUSE1.448e-1646.91Magnesium transporter NIPA4 OS=Mus musculus GN=Nip... [more]
NIPA3_PONAB1.891e-1648.72Magnesium transporter NIPA3 OS=Pongo abelii GN=NIP... [more]
NIPA3_HUMAN3.226e-1648.72Magnesium transporter NIPA3 OS=Homo sapiens GN=NIP... [more]
NIPA3_MOUSE2.091e-1548.72Magnesium transporter NIPA3 OS=Mus musculus GN=Nip... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-010-H11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675467 ID=EY675467; Name=EY675467; organism=Citrus sinensis; type=EST; length=1031bp
CCCAAACATGGTGCCTTCACCTTAATTGTAATTGTTTGTGTGCTTACCCA
AATGAATTATCTGAACATGGCGCTTGATACTTTTAACACGGCAGTTGTCT
CTCCCATATACTATGTGATGTTCACATCACTTACCATTCTAGCTAGCGTG
ATCATGTTTAAGGACTGGGATAGGCAGAATCCAACCCAGATTGTCACGGA
AATGTGTGGATTTGTTACAATCCTTGCAGGAACTTTTCTTCTTCACAAAA
CCAAGGACCTGGGTGATGGTTCAAGTTTGACACCGTCTATGTCACTACGA
TTATCGAAGCATGCGGGTAACGACGACTTGGAATCCGAGGGCATCCCTCT
TAGGCGGCAGGAGTCACTGAGAACACCGTGATATTCATATATTCTTTGCT
TTCATTCTCTGCCATTCATAACAAACATCAAACTCTGGGGAGGAACTGAC
ATCAACTTGTATTTTGGATCCAATCATTTTTATTGGGGAATCCTTTTTAC
CGGAAAACGGTAGAGGATGATATTTTTGTTTTGCTTGTCCCCCTGGTTCC
GCTTCCCGAAAAAAATCCCAAGAATTTCAGCCACCTGCAATAATTTTAAC
CGTTTTCCCCCTGGGGCAATCAAAAGGGAATGCCAAATTGGAATTTTTAA
CCCGGGTGGGTTGAAATACTGAAATTTTTCCCAAAAAAAAAAGGTACCCT
TGGCCTCAATTTTGGCAAAAAATCAAGGGAAAAATTTTCCCCAAAGTGGG
TGGATGGTAAATTTACAAAAAAAAAATCAATGAAAAAACAAAATTTTTTA
ACAAAAAAAAAAATAAAAAAAAGGGGGGGGGCCCCCCCTCCTGAGAAGAA
CCCACAAACTTTTATGTAGCACCACCAGGGTGTGAGGCGACGAATTATAA
AATCAATCTTCATTAATGTAGTGTGCTACCAATAATAATTTAACATTTTA
CTACGGGGGGGGCCCCGCGGATATTTGTATAACGACGACGATGCCGGCGC
GGGTGGGCGGGGGGGAGGAGAAGAAAGAAAC
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