EY675459

Overview
NameEY675459
Unique NameEY675459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY675459_ssr393 microsatellite EY675459_ssr393:393..404. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP2_TOBAC (Luminal-binding protein 2 (Fragment) OS=Nicotiana tabacum GN=BIP2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.753e-48
Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPG 372
            VREAEEFAEEDKKVKE+IDAR+S ETYVYNMKNQINDK++LADKLESDEK+KIETA KEALEWLDDNQSAEKEDYEEKLKEVEAVCNP+ITAVYQRSGGAPG
Sbjct:  175 VREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 276          
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.596e-48
Identity = 93/102 (91.18%), Postives = 100/102 (98.04%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPG 372
            VREAEEFAEEDKKVKE+IDAR+S ETYVYNMKNQINDK++LADKLESDEK+KIETA KEALEWLDDNQSAEKEDYEEKLKEVEA+CNP+ITAVYQRSGGAPG
Sbjct:  175 VREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQRSGGAPG 276          
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.133e-48
Identity = 93/102 (91.18%), Postives = 100/102 (98.04%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPG 372
            VREAEEFAEEDKKVKEKIDAR++ ETYVYNMKNQINDK++LADKLESDEK+KIETA KEALEWLDDNQSAEKEDY+EKLKEVEAVCNP+ITAVYQRSGGAPG
Sbjct:  551 VREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPG 652          
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.331e-47
Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPG 372
            VREAEEFAEEDKKVKE+IDAR+  ETYVYNMKNQINDK++LADKLESDEK+KIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNP+ITAVYQRSGGA G
Sbjct:   54 VREAEEFAEEDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGASG 155          
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP8_TOBAC (Luminal-binding protein 8 (Fragment) OS=Nicotiana tabacum GN=BIP8 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.044e-47
Identity = 91/102 (89.22%), Postives = 100/102 (98.04%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPG 372
            V+EAEEFAEEDKKVKE+IDAR+S ETYVYNM+NQINDK++LADKLESDEK+KIETA KEALEWLDDNQSAEKEDYEEKLKEVEAVCNP+ITAVYQ+SGGAPG
Sbjct:  178 VKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQKSGGAPG 279          
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.044e-47
Identity = 91/102 (89.22%), Postives = 100/102 (98.04%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPG 372
            V+EAEEFAEEDKKVKE+IDAR+S ETYVYNM+NQINDK++LADKLESDEK+KIETA KEALEWLDDNQSAEKEDY+EKLKEVEAVCNP+ITAVYQRSGGAPG
Sbjct:  551 VKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPG 652          
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.044e-47
Identity = 91/102 (89.22%), Postives = 100/102 (98.04%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPG 372
            V+EAEEFAEEDKKVKE+IDAR+S ETYVYNM+NQINDK++LADKLESDEK+KIETA KEALEWLDDNQSAEKEDYEEKLKEVEAVCNP+ITAVYQ+SGGAPG
Sbjct:  552 VKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQKSGGAPG 653          
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.849e-45
Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPGVLG 381
            VREAEEFAEEDKKVKEKIDAR+S ETY+YNMKNQI+D ++LADKLESDEK+KIE AVKEALEWLDDNQSAEKEDY+EKLKEVEAVCNP+ITAVYQRSGG  G  G
Sbjct:  551 VREAEEFAEEDKKVKEKIDARNSLETYIYNMKNQISDADKLADKLESDEKEKIEGAVKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGPSGESG 655          
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.860e-45
Identity = 86/105 (81.90%), Postives = 99/105 (94.29%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPGVLG 381
            V+EAEEFAEEDKKVKEKIDAR++ ETYVYNMKNQ+NDK++LADKLE DEK+KIE A KEALEWLD+NQ++EKE+Y+EKLKEVEAVCNP+ITAVYQRSGGAPG  G
Sbjct:  550 VKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGGAG 654          
BLAST of EY675459 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.847e-44
Identity = 85/105 (80.95%), Postives = 99/105 (94.29%), Query Frame = 1
Query:   67 VREAEEFAEEDKKVKEKIDARHSHETYVYNMKNQINDKEQLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPVITAVYQRSGGAPGVLG 381
            V+EAEEFAEEDKKVKEKIDAR++ ETYVYNMKNQ++DK++LADKLE DEK+KIE A KEALEWLD+NQ++EKE+Y+EKLKEVEAVCNP+ITAVYQRSGGAPG  G
Sbjct:  550 VKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGAGG 654          
The following BLAST results are available for this feature:
BLAST of EY675459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
BIP2_TOBAC2.753e-4892.16Luminal-binding protein 2 (Fragment) OS=Nicotiana ... [more]
BIP1_TOBAC3.596e-4891.18Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]
BIP_SOLLC6.133e-4891.18Luminal-binding protein OS=Solanum lycopersicum PE... [more]
BIP3_TOBAC2.331e-4791.18Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
BIP8_TOBAC3.044e-4789.22Luminal-binding protein 8 (Fragment) OS=Nicotiana ... [more]
BIP5_TOBAC3.044e-4789.22Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP4_TOBAC3.044e-4789.22Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
BIP_SPIOL2.849e-4585.71Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
BIP1_ARATH4.860e-4581.90Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
BIP2_ARATH1.847e-4480.95Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-010-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675459 ID=EY675459; Name=EY675459; organism=Citrus sinensis; type=EST; length=930bp
GCAAATCAGAGAGAACCCTTTCAGGGGTGAGAAGGGTCGCCTGAGCCAGG
AGGACCCTCTTAAAAGGTTCGTGAGGCTGAAGAATTTGCCGAGGAGGACA
AGAAAGTAAAGGAGAAGATCGATGCTCGCCACAGCCATGAGACCTATGTC
TATAACATGAAAAACCAGATTAATGACAAGGAGCAGCTTGCCGACAAGCT
CGAATCTGATGAGAAGGACAAGATTGAAACTGCTGTAAAGGAAGCCCTTG
AATGGCTCGATGACAACCAGAGTGCAGAGAAAGAGGACTATGAAGAGAAG
CTCAAGGAGGTTGAAGCCGTTTGCAACCCCGTCATCACTGCTGTATATCA
GAGATCTGGAGGAGCCCCAGGGGTGCTGGGGCTGAATCATCGGATGATGA
TGATCACGGGGTGGGGGGGGGGGAGTCATGACTTCGATTGGACGTATTAG
CAATAATGGCAAGAGGCGAGAGATGAATAAATAAAGATTATAGATTTAAC
TGAGGGTAATTAGTGAGATTATACCAGTGGTAAGGGAAGATAGAGGGGAG
GGAGGATTTTTACTTTCTCGAGAGGTTTTTATGGGTGGAGGATGAAGTAA
AAGGGAGGTTTGACTGAGCAGTTGATAATGTGTACGTTAGACATGAAAAG
AGATTAGAAAAGGTAGAAAAAACGAAAAGGAAAGAGAAAGGAGAAAGGAG
AGAGAAAGAGAATGAGGGGGGGAGAGAAGAAAAGAAGGAGGGATGGAAAA
AAGAGGAGGAAGAGAAAGGGGGCAGTGGTATGGAGAGGGGGAAGATTGGA
GAAAAGAAGAGAGAAGGGTAAAATAGGGAGAAAAGAAGAGAGATACGGGA
GAAGAAAGAGCAGAGGAAGGAAGAAAGAGGCAAAAGAGTAACAAGGAGAG
GAGGGAGGGGAAAGGAGAGGAGGGGGATAC
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