EY675455

Overview
NameEY675455
Unique NameEY675455
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length452
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7725 contig Csv1_Contig7725:791..1242. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.618e-47
Identity = 90/99 (90.91%), Postives = 96/99 (96.97%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 298
            PSYR SSFLDPKGRGGST YDNA+ALPAGGRGDEE+L KEN+KNTSSSTGKITLSVT+SKPETGEVIGVFES+QPSDTD+GAKVPKDVKIQGIWYAQLE
Sbjct:  234 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332          
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 1.789e-46
Identity = 88/99 (88.89%), Postives = 95/99 (95.96%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 298
            PSYR SSFLDPKGRGGST YDNA+ALPAGGRGDEE+L KEN+KNT+S TGKITLSVT+SKPETGEVIGVFES+QPSDTD+GAKVPKDVKIQGIWYAQLE
Sbjct:  231 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329          
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.160e-45
Identity = 87/99 (87.88%), Postives = 93/99 (93.94%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 298
            PSYR SSFLDPKGRGGS  YDNA+ALPAGGRGDEE+L KENIK+ SSSTGKITLSVTKSKPETGEVIGVFES+QPSDTD+G+K PKDVKIQGIWYAQLE
Sbjct:  231 PSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329          
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.515e-45
Identity = 85/99 (85.86%), Postives = 93/99 (93.94%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 298
            PSYR SSFLDPKGRGGST YDNA+ALPAGGRGDEE+L KEN+KNT++S G+ITL VTKSKPETGEVIGVFESLQPSDTD+GAKVPKDVKIQG+WY QLE
Sbjct:  234 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332          
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.584e-45
Identity = 83/99 (83.84%), Postives = 94/99 (94.95%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 298
            PSYR SSFLDPKGRGGST YDNA+ALPAGGRGDEE+L+KEN+KNT++S G+ITL +TKSKPETGEVIGVFESLQPSDTD+GAKVPKDVKIQG+WY Q+E
Sbjct:  233 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331          
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 9.818e-45
Identity = 84/99 (84.85%), Postives = 92/99 (92.93%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 298
            PSYR SSFLDPKGRGGST YDNA+ALPAGGRGDEE+L KEN+KNT+S TGKIT +VTKS P+TGEVIGVFES+QPSDTD+GAK PKDVKIQGIWYAQLE
Sbjct:  234 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLE 332          
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 2.187e-44
Identity = 85/100 (85.00%), Postives = 92/100 (92.00%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLEQ 301
            PSYR SSFLDPKGRGGST YDNA+ALPAGGRGDEE+L KEN KN +SS G ITLSVT SKPETGEVIGVF+SLQPSDTD+GAKVPKDVKI+G+WYAQLEQ
Sbjct:  232 PSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLEQ 331          
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 4.125e-43
Identity = 82/99 (82.83%), Postives = 91/99 (91.92%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 298
            PSYR SSFLDPKGRG ST YDNA+ALPAGGRGDEE+L KEN K+ +SS GKITLSVT++KPETGEVIGVFES+QPSDTD+GAK PKDVKIQG+WYAQLE
Sbjct:  230 PSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328          
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.674e-42
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 298
            PSYR SSFLDPKGRGGST YDNA ALP GGRGDEE+LAKEN+KN SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTD+ A  PKDVKIQG+WYAQLE
Sbjct:  227 PSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLEA--PKDVKIQGVWYAQLE 323          
BLAST of EY675455 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.921e-32
Identity = 66/99 (66.67%), Postives = 77/99 (77.78%), Query Frame = 2
Query:    2 PSYRASSFLDPKGRGGSTPYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 298
            PSYR SSFLDPKGRGGST YDNA+ALPA  R D E+L KEN+K T +  G    SV K  P TGE+ GVFES+QPSDTD+GAK PKD+K+ G+WYAQL+
Sbjct:  195 PSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291          
The following BLAST results are available for this feature:
BLAST of EY675455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PSBO_TOBAC1.618e-4790.91Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC1.789e-4688.89Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_FRIAG1.160e-4587.88Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO1_ARATH1.515e-4585.86Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO2_ARATH2.584e-4583.84Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_SOLTU9.818e-4584.85Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SPIOL2.187e-4485.00Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_PEA4.125e-4382.83Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_WHEAT2.674e-4285.86Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_CHLRE1.921e-3266.67Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-010-G05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675455 ID=EY675455; Name=EY675455; organism=Citrus sinensis; type=EST; length=452bp
ACCATCATACCGTGCCTCATCCTTCTTGGACCCAAAGGGAAGGGGTGGTT
CAACTCCTTATGACAATGCTATTGCATTGCCTGCTGGCGGAAGAGGGGAT
GAGGAAGATCTCGCCAAGGAGAATATCAAGAATACTTCATCTTCAACAGG
GAAGATCACCCTCAGCGTTACCAAGAGCAAGCCTGAGACTGGAGAGGTTA
TTGGAGTGTTTGAGAGCCTTCAGCCATCTGATACTGATATGGGAGCCAAG
GTTCCAAAGGATGTTAAGATCCAGGGTATCTGGTATGCACAGCTTGAGCA
ATAGAGCTTTTCTTGTATGAGTGTACTTATTCCTATTCAGATTTTGAAAC
ATGTTGAAGGTGTTGCTAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAGGAGTGGGCGGGGGGAGGGAAAAAAAAAAAACAAGGAGGATCAAAT
GG
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