EY675452

Overview
NameEY675452
Unique NameEY675452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1032
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675452 vs. ExPASy Swiss-Prot
Match: URAA_PASMU (Probable uracil permease OS=Pasteurella multocida GN=uraA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.770e-30
Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = -1
Query:    1 GAQVPVFLASSFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLMGFAMSFYFGV 429
            G QVP+FLASSFAFI PI      +G+A TMGG++  G VY  L   VKIKG G + +               + +AP+A +MA+GK    +    Y  A+ +SM  LLTTL VAVF KG+ +L+PI+ G+++G+ +  + G+
Sbjct:   62 GRQVPIFLASSFAFIAPIQYGVTTWGIATTMGGLVFTGLVYFALSTLVKIKGAGALQKVFPPVVVGPVIIIIGMGLAPVAVDMALGK----NSTYQYNDAVFVSMATLLTTLGVAVFAKGMMKLIPIMFGIVVGYILCLFLGL 200          

HSP 2 Score: 41.5874 bits (96), Expect = 2.770e-30
Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = -2
Query:  423 SFLAAQMFFVALGGVVLRPLIPGSRSKTSPCFTAGFGTLLFP--SGHRAP 566
            +F+  QM FVA G +VL PLI G  + T+   TAG GTLLF   +G + P
Sbjct:   18 AFVGLQMLFVAFGALVLVPLITGLNANTA-LLTAGIGTLLFQLCTGRQVP 66          
BLAST of EY675452 vs. ExPASy Swiss-Prot
Match: URAA_HAEIN (Probable uracil permease OS=Haemophilus influenzae GN=uraA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.358e-22
Identity = 63/162 (38.89%), Postives = 90/162 (55.56%), Query Frame = -1
Query:    1 NVALFYRRVWHLVVPKWSPGAQVPVFLASSFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLMGFAMSFYFGV 486
            N AL    V  L+  ++  G QVP+FLASSFAFI PI      +G+A TMGG+   G VY  L   VK++G   + R               + +APIA +M++GK    +    Y  A+L+SM  LLTTL VAVF KG+ +L+PI+ G+  G+ +  + G+
Sbjct:   45 NTALLTAGVGTLLF-QFCTGKQVPIFLASSFAFIAPIQYGVQTWGIATTMGGLAFTGLVYFALSTLVKLRGAEALQRFFPPVVVGPVIIIIGMGLAPIAVDMSLGK----NSAYAYNDAVLVSMVTLLTTLSVAVFAKGLMKLIPIMFGITAGYILCLFLGL 201          
BLAST of EY675452 vs. ExPASy Swiss-Prot
Match: PYRP_BACSU (Uracil permease OS=Bacillus subtilis GN=pyrP PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.231e-15
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = -1
Query:    1 QVPVFLASSFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLMGFAMSFYFGV 423
            Q+P +L SSFAFI+PIIL K   G  A M G   AG VY  + L ++  GTG++ +               L +A  A NMAM    + SEL++      ++   L  T+I A+F +G   L+P++ G++ G+  +   G+
Sbjct:   66 QIPAYLGSSFAFISPIILVKATGGPGAAMVGAFLAGLVYGLIALLIRQLGTGWLMKILPPVVVGPVIIVIGLGLASTAVNMAMYADPNASELVYSLKHFSVAGVTLAITIICAIFLRGFLSLIPVLIGIIGGYLFALTQGI 206          
BLAST of EY675452 vs. ExPASy Swiss-Prot
Match: PYRP_BACCL (Uracil permease OS=Bacillus caldolyticus GN=pyrP PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.379e-13
Identity = 46/151 (30.46%), Postives = 74/151 (49.01%), Query Frame = -1
Query:    1 LVVPKWSPGAQVPVFLASSFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLMGFAMSFYFGV 453
            L++ KW    QVP +L SSFA+I PII AK   G  A M G   AG VY  + L +K  G  ++ +               L +A  A  MAM        L+H+  A++     L  T++ +V  +G+  L+P++ G+++G+  +   G+
Sbjct:   58 LLITKW----QVPAYLGSSFAYIAPIIAAKTAGGPGAAMIGSFLAGLVYGVVALIIKKAGYRWVMKLLPPVVVGPVIIVIGLGLAGTAVGMAMNGPDGKYSLLHFSVALV----TLAATIVCSVLARGMLSLIPVLVGIVVGYLYALAVGL 200          
BLAST of EY675452 vs. ExPASy Swiss-Prot
Match: URAA_ECOLI (Uracil permease OS=Escherichia coli (strain K12) GN=uraA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.841e-12
Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = -1
Query:    1 QVPVFLASSFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLMGFAMSFYFGV 423
            ++P +L SSFAFI+P++L     G    +GG +  G ++  +   VK  GTG++D                L +A +AA MA     +G         ++IS+  L  T++ +V  +G   ++PI+ GVL+G+A+SF  G+
Sbjct:   64 KIPAYLGSSFAFISPVLLLL-PLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQT--PDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGI 201          
BLAST of EY675452 vs. ExPASy Swiss-Prot
Match: URAA_ECO57 (Uracil permease OS=Escherichia coli O157:H7 GN=uraA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.841e-12
Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = -1
Query:    1 QVPVFLASSFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLMGFAMSFYFGV 423
            ++P +L SSFAFI+P++L     G    +GG +  G ++  +   VK  GTG++D                L +A +AA MA     +G         ++IS+  L  T++ +V  +G   ++PI+ GVL+G+A+SF  G+
Sbjct:   64 KIPAYLGSSFAFISPVLLLL-PLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQT--PDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGI 201          
The following BLAST results are available for this feature:
BLAST of EY675452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
URAA_PASMU2.770e-3041.26Probable uracil permease OS=Pasteurella multocida ... [more]
URAA_HAEIN1.358e-2238.89Probable uracil permease OS=Haemophilus influenzae... [more]
PYRP_BACSU1.231e-1533.33Uracil permease OS=Bacillus subtilis GN=pyrP PE=1 ... [more]
PYRP_BACCL4.379e-1330.46Uracil permease OS=Bacillus caldolyticus GN=pyrP P... [more]
URAA_ECOLI4.841e-1230.50Uracil permease OS=Escherichia coli (strain K12) G... [more]
URAA_ECO574.841e-1230.50Uracil permease OS=Escherichia coli O157:H7 GN=ura... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-010-F12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675452 ID=EY675452; Name=EY675452; organism=Citrus sinensis; type=EST; length=1032bp
TACACCGAAGTAGAACGACATGGCGAAACCCATCAGCACGCCGGAGATGA
TCGGCACCAGGCGGAAAATGCCTTTGCCGAATACCGCCACGATCAATGTG
GTCAGCAGCGCCGGCATCGAGATCAGCATGGCGGTTTGGTAGTGGATCAA
CTCGCTACCGTCACCCGCCTTGCCCATCGCCATGTTGGCGGCAATCGGCG
CCATGGCCAGGCCGATGGAGATAATCACCGGCCCGATCACCACCGGCGGC
AGCAGCCGGTCGATGAAACCGGTGCCCTTGATCTTCACCGCCAGCCCCAG
GAAGGTGTAAACGAAACCTGCCGCCATCACGCCGCCCATGGTCGCCGCGA
GGCCGAATTGGCCTTTGGCGAGAATGATCGGGGTGATAAACGCAAAGCTC
GACGCCAGGAACACCGGGACTTGGGCGCCCGGTGACCACTTGGGAACAAC
AAGGTGCCAAACCCTGCGGTAAAACAGGGCGACGTTTTGGATCGAGAACC
GGGGATCAGCGGCCTCAACACCACGCCGCCCAATGCTACGAAAAACATCT
GTGCGGCCAAAAAGGAATCTGGGCGCCAAAGCGGGGTCGTTAAAATTCAT
CCGGCATGGTCCCGCAGCCCTTTCTGCTTGGTACCCAAAGAAATTAGTCC
CCCGGGCTGCCCCCAGCCCAGGGATGACACTAACCACGGTTCTGATCAGG
GGGTCTCACCAGTGAGAAGGGCGATGTATATTCAAGAACTGGAAGGAGGG
CATATGCCGAGTAGGGGAGATGAGCTAAATGGGAGGGGGGTAAGAGCGGA
CATAGGAGGCGAAAAGTAAAAGAGGAAACGATGGCGTGTTTTGTCGCTGA
GCCAATTGGTGAGCATCCTCTCTACAGCACATAATAAATGGAAAAGGAGA
GATTATGTGATGATATTTCGAAATAAATCATCAGAGAGCCAACCTTATGG
TAATTATCAGAGTCAAAGCAAGTATATATGTGATCATAACCAAAAAAAAG
GAAACACGAGGGAAAGTAAAACTTGAAGGAGA
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