EY675408

Overview
NameEY675408
Unique NameEY675408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10308 contig Csv1_Contig10308:420..1454. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: SDR1_ARATH ((+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.543e-45
Identity = 116/229 (50.66%), Postives = 147/229 (64.19%), Query Frame = 3
Query:    3 GVTVASTARDEKRGLAAVEQLKNS---GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNF-VGIVEGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSD-----WMRCRRSI*MILH------LKTQN-----PAYLISKAS-N*WPNPRILAKKFHKNFAQ*YLPPA*VQT 626
            G+ V  T+RDE RGL AVE LK        +++FH LDV DPAS+ SL  FV +QFGKLDILVNNAGIGG   + +    G  + G    W +++T+TYEL E+CI+ NYYG KRMCEA IPLL+LSDSPRIVN SSSMG+LKN+ NEWAKG+LSD       R  + I  +L+      +K +N      AY++SKAS N +   R+LAKK H  F    + P  V+T
Sbjct:   30 GIRVVLTSRDENRGLEAVETLKKELEISDQSLLFHQLDVADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEGF--KWDEIITETYELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKNVLNEWAKGILSDAENLTEERIDQVINQLLNDFKEGTVKEKNWAKFMSAYVVSKASLNGY--TRVLAKK-HPEFRVNAVCPGFVKT 253          
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: SDR2_ARATH (Short-chain dehydrogenase/reductase 2 OS=Arabidopsis thaliana GN=SDR2 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 8.182e-44
Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 3
Query:    3 GVTVASTARDEKRGLAAVEQLKNS---GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNF-VGIVEGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSD 458
            G+ V  T+RDEK+GL AVE LK        +++FH LDV+DP SV SL  FV + FGKLDIL+NNAG+GG   + D    G  + G    W + +T+TYELAE+CI+ NYYG KRMCEA IPLLQLSDSPRI+N SS MG++KN+ NEWAKG+LSD
Sbjct:   30 GIRVILTSRDEKQGLEAVETLKKELEISDQSIVFHQLDVSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITDVDALRAGTGKEGF--KWEETITETYELAEECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQVKNLVNEWAKGILSD 183          
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: MNR1_CAPAN ((+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.011e-38
Identity = 87/171 (50.88%), Postives = 114/171 (66.67%), Query Frame = 3
Query:    3 GVTVASTARDEKRGLAAVEQLK---NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGD---------NFVGIV----EGGLPDNWYKM---LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSD 458
            GV V  T+RDEK+G+ A+E+LK   N   ++++FH LD+ DPAS+ SLV+ + ++FG+LDIL+NNAGI G  +EGD          ++ IV    E G    W K        YEL ++CI+TNYYG KRM EA IPLLQLS+SPRIVN +SSMGKLK + N+WA  VL D
Sbjct:   32 GVVVVLTSRDEKKGIEAIERLKEESNFTDEHILFHQLDIMDPASISSLVNLIKTKFGRLDILINNAGISGVMVEGDVQVLKEILERYISIVFTEDENGEEGGWTKSGPGSVTNYELTKECIETNYYGAKRMTEAFIPLLQLSNSPRIVNVASSMGKLKLLCNKWAIEVLRD 202          
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: SALR_PAPBR (Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.933e-38
Identity = 83/164 (50.61%), Postives = 112/164 (68.29%), Query Frame = 3
Query:    3 GVTVASTARDEKRGLAAVEQLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNFVGIVEGGLPDNW-----------YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSD 458
            G+ V  T RD  RGL AVE+LKNS  +NV+FH LDVTDP  ++ SL  F+ ++FGKLDILVNNAG+ GF+++ D F  ++     D+             +++++TYELAE+C++ NYYG K + E L+PLLQLSDSPRIVN SSS G LK ++NE A  +L D
Sbjct:   36 GIMVVLTCRDVTRGLEAVEKLKNSNHENVVFHQLDVTDPITTMSSLADFIKARFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEVVKIYEKPEAQELMSETYELAEECLKINYYGVKSVTEVLLPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGD 199          
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: CBR1_BOVIN (Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.719e-13
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 3
Query:   12 VASTARDEKRGLAAVEQLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNFVGIVEGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS--SMGKLKNITNE 434
            V  TARDE RG AAV+QL+  G  + +FH LD+ D  S+ +L  F+  ++G LD+LVNNAGI     +                    T  +  AE  ++TN++G + +C  L+PL++     R+VN SS  S+  LK  + E
Sbjct:   33 VVLTARDEARGRAAVQQLQAEGL-SPLFHQLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTAD-------------------TTPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSFVSVNSLKKCSRE 153          
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: CBR1_MOUSE (Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 2.173e-12
Identity = 50/139 (35.97%), Postives = 77/139 (55.40%), Query Frame = 3
Query:   12 VASTARDEKRGLAAVEQLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNFVGIVEGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS--SMGKLKN 422
            V   ARDE+RG  AV++L+  G  +  FH LD+ +P S+ +L  F+  ++G LD+LVNNAGI  F +  D                  T  +  AE  ++TN++G + +C+ L+PL++     R+VN SS  S+  LKN
Sbjct:   33 VVLAARDEERGQTAVQKLQAEGL-SPRFHQLDIDNPQSIRALRDFLLKEYGGLDVLVNNAGI-AFKVNDD------------------TPFHIQAEVTMKTNFFGTRDVCKELLPLIK--PQGRVVNVSSMVSLRALKN 149          
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: CBR1_RAT (Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.079e-11
Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 3
Query:   12 VASTARDEKRGLAAVEQLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNFVGIVEGGLPDNWYKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 407
            V  TARDE RG  AV+QL+  G  +  FH LD+ +P S+ +L  F+  ++G L++LVNNAGI                      +K++  T  +  AE  ++TN++G + +C+ L+P+++     R+VN SSS+
Sbjct:   33 VVLTARDESRGHEAVKQLQTEGL-SPRFHQLDIDNPQSIRALRDFLLQEYGGLNVLVNNAGIA---------------------FKVVDPTPFHIQAEVTMKTNFFGTQDVCKELLPIIK--PQGRVVNVSSSV 142          
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: CBR1_PONAB (Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 4.099e-11
Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = 3
Query:   12 VASTARDEKRGLAAVEQLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNFVGIVEGGLPDNWYKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 407
            V  TARD  RG AAV+QL+  G  +  FH LD+ D  S+ +L  F+  ++G LD+LVNNAGI                      +K+   T  +  AE  ++TN++G + +C  L+PL++     R+VN SS M
Sbjct:   33 VVLTARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA---------------------FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIM 142          
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: CBR1_HUMAN (Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 4.099e-11
Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = 3
Query:   12 VASTARDEKRGLAAVEQLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNFVGIVEGGLPDNWYKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 407
            V  TARD  RG AAV+QL+  G  +  FH LD+ D  S+ +L  F+  ++G LD+LVNNAGI                      +K+   T  +  AE  ++TN++G + +C  L+PL++     R+VN SS M
Sbjct:   33 VVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA---------------------FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIM 142          
BLAST of EY675408 vs. ExPASy Swiss-Prot
Match: CBR1_PIG (Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 5.353e-11
Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 3
Query:   12 VASTARDEKRGLAAVEQLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILVNNAGIGGFNMEGDNFVGIVEGGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 410
            V  TARD  RG AAV+QL+  G  +  FH LD+ D  S+ +L  F+  ++G LD+LVNNA I  F ++                    T  +  AE  ++TN+ G + +C  L+PL++     R+VN SS+ G
Sbjct:   33 VVLTARDVARGQAAVKQLQAEGL-SPRFHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAI-AFQLDNP------------------TPFHIQAELTMKTNFMGTRNVCTELLPLIK--PQGRVVNVSSTEG 143          
The following BLAST results are available for this feature:
BLAST of EY675408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SDR1_ARATH2.543e-4550.66(+)-neomenthol dehydrogenase OS=Arabidopsis thalia... [more]
SDR2_ARATH8.182e-4458.33Short-chain dehydrogenase/reductase 2 OS=Arabidops... [more]
MNR1_CAPAN3.011e-3850.88(+)-neomenthol dehydrogenase OS=Capsicum annuum GN... [more]
SALR_PAPBR3.933e-3850.61Salutaridine reductase OS=Papaver bracteatum GN=SA... [more]
CBR1_BOVIN5.719e-1335.66Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1... [more]
CBR1_MOUSE2.173e-1235.97Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cb... [more]
CBR1_RAT1.079e-1134.33Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus ... [more]
CBR1_PONAB4.099e-1135.82Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CB... [more]
CBR1_HUMAN4.099e-1135.82Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CB... [more]
CBR1_PIG5.353e-1135.34Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-010-B10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675408 ID=EY675408; Name=EY675408; organism=Citrus sinensis; type=EST; length=1035bp
ATGGAGTCACTGTGGCCTCAACTGCTAGAGATGAGAAGAGGGGTCTTGCA
GCTGTTGAACAACTCAAAAACTCTGGCTGTGACAATGTGATCTTTCATCT
GCTTGATGTGACAGACCCCGCTAGCGTTGACTCTCTAGTTCATTTCGTCA
GTAGTCAGTTTGGGAAGCTTGATATTCTGGTAAACAATGCAGGGATTGGT
GGATTCAACATGGAAGGTGATAATTTTGTAGGAATTGTTGAGGGTGGTTT
GCCGGACAACTGGTATAAAATGTTAACTCAAACTTATGAGTTAGCTGAAA
AGTGCATTCAAACAAACTACTATGGTAACAAAAGAATGTGTGAAGCACTT
ATTCCCCTCCTCCAGTTATCAGATTCACCCAGAATTGTTAATGCTTCCTC
TTCCATGGGAAAGTTAAAGAATATAACAAATGAATGGGCCAAAGGAGTGT
TGAGTGATTGGATGAGGTGCCGAAGGAGTATCTAAATGATTTTACACCTG
AAAACCCAAAACCCCGCTTACTTAATATCAAAAGCCAGCAACTAATGGCC
CAACCCAAGGATCCTGGCGAAAAAATTTCACAAAAATTTTGCTCAATAGT
ATTTGCCCCCGGCCTAAGTCCAAACCAGATTTTAACCCACAACACACGGG
CGTATTTAACCGTTGAAAAAAAGGGGCTGGAAAAGTCAGGGGGGGTTAGT
TTCGGCTGGCCCAAAGGGGAGGGTCCCTCAAAATGGGTATTTCTTTGTAT
TTGAAAAACAAACCCACCCCCCCTCCCCTTTTTTTAGAAAAAAAAGATTT
TTTAATTTTGCGTGTTTTTACCCGATTGGGGATCCCAAAAAAAAAAAAAC
ATAAAGGGCCACAAGCCTTTGGTTTGTGTTTTTCTAACAAAAACAAAAGA
GAAAGAATAGAAATGAAAATGCATAAAGTGAGCAATTTAATAGGGCGCAT
TGACGGATGATGAAAATAAAACATATAATTCGAAATTGAAGACATAAAAC
AACAAGGTTGAGCATATGATCAAGATGAATATGAA
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