EY675406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675406 vs. ExPASy Swiss-Prot
Match: NSUN2_CHICK (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Gallus gallus GN=NSUN2 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.819e-34 Identity = 70/130 (53.85%), Postives = 90/130 (69.23%), Query Frame = 1 Query: 64 VLCDVPCSGDGFLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFP 450 +LCDVPCSGDG +RK D+W+KW LH LQ++IA RG+ L GGR+VYSTCS+NP+ENEAV+A +L K +G++EL DVS+E+P L PG+ KWKV K G W K V R+ I P+MFP Sbjct: 265 ILCDVPCSGDGTMRKNIDVWKKWTTQNSLQLHGLQLRIATRGVEQLAEGGRMVYSTCSLNPIENEAVIASLLEKSQGALELADVSSELPGLKRMPGITKWKVMLKDGQWFEEWKDVPSNRQTQIRPTMFP 394
BLAST of EY675406 vs. ExPASy Swiss-Prot
Match: NSUN2_XENTR (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Xenopus tropicalis GN=nsun2 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.079e-33 Identity = 71/137 (51.82%), Postives = 93/137 (67.88%), Query Frame = 1 Query: 46 QLLLYS-VLCDVPCSGDGFLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFP 450 ++L Y +LCDVPCSGDG LRK D+W+KW LH LQ++IA RG+ L GGR+VYSTCS+NPVE+EAV+A +L K EGS+EL DV++E+P L PG+ +WKV K G W + + R I P+MFP Sbjct: 260 EVLYYDRILCDVPCSGDGTLRKNIDVWKKWTTLNSLQLHGLQIRIATRGVEQLAEGGRMVYSTCSLNPVEDEAVIASLLDKSEGSLELADVASEIPGLKWMPGITQWKVMTKEGHWYEKWEDIPTSRHTQIRPTMFP 396
BLAST of EY675406 vs. ExPASy Swiss-Prot
Match: NSUN2_HUMAN (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Homo sapiens GN=NSUN2 PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 6.958e-33 Identity = 71/137 (51.82%), Postives = 91/137 (66.42%), Query Frame = 1 Query: 46 QLLLYS-VLCDVPCSGDGFLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFP 450 ++L Y +LCDVPCSGDG +RK D+W+KW LH LQ++IA RG L GGR+VYSTCS+NP+E+EAV+A +L K EG++EL DVSNE+P L PG+ +WKV K G W V R I P+MFP Sbjct: 258 EILFYDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPIEDEAVIASLLEKSEGALELADVSNELPGLKWMPGITQWKVMTKDGQWFTDWDAVPHSRHTQIRPTMFP 394
BLAST of EY675406 vs. ExPASy Swiss-Prot
Match: NSUN2_MOUSE (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Mus musculus GN=Nsun2 PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 2.644e-32 Identity = 71/137 (51.82%), Postives = 92/137 (67.15%), Query Frame = 1 Query: 46 QLLLYS-VLCDVPCSGDGFLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFP 450 ++L Y +LCDVPCSGDG +RK D+W+KW LH LQ++IA RG L GGR+VYSTCS+NPVE+EAV+A +L K EG++EL DVS E+P L PG+ +WKV + G W A V + R I P+MFP Sbjct: 258 EILFYDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPVEDEAVIAALLEKSEGALELADVSAELPGLKWMPGVSQWKVMTRDGQWFADWHEVPQGRHTQIRPTMFP 394
BLAST of EY675406 vs. ExPASy Swiss-Prot
Match: NSUN2_XENLA (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Xenopus laevis GN=nsun2 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 4.510e-32 Identity = 69/137 (50.36%), Postives = 92/137 (67.15%), Query Frame = 1 Query: 46 QLLLYS-VLCDVPCSGDGFLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFP 450 ++L Y +LCDVPCSGDG +RK D+W+KW LH LQ++IA RG+ L GGR+VYSTCS+NPVE+EAV+ +L K EGS+EL DV++E+P L PG+ +W+V K G W + V R I P+MFP Sbjct: 256 EVLYYDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQIRIATRGVEQLAEGGRMVYSTCSLNPVEDEAVIVSLLDKSEGSLELADVASELPGLKWMPGITQWRVMTKEGQWFEKWEDVPTSRHTQIRPTMFP 392
BLAST of EY675406 vs. ExPASy Swiss-Prot
Match: NSUN2_DROME (tRNA (cytosine-5-)-methyltransferase CG6133 OS=Drosophila melanogaster GN=CG6133 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.312e-31 Identity = 66/143 (46.15%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 64 VLCDVPCSGDGFLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGI--WLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIE 486 +LCDVPCSGDG LRK PDIW KWN+ LH +Q +I RG +L+VGGR+VYSTCS+NP+ENEAV+ I++ +G++ELVD + VP L ++PG+ WK+ K + + V + I P MFP + M +E Sbjct: 267 ILCDVPCSGDGTLRKNPDIWLKWNLAQAYNLHGIQYRIVRRGAEMLEVGGRLVYSTCSLNPIENEAVLQRIIKDADGALELVDAGHLVPGLKYKPGMTDWKLATKEVDQIFTRFEEVPESLHTIIRPGMFPLPADEMAKIGLE 409
BLAST of EY675406 vs. ExPASy Swiss-Prot
Match: NCL1_YEAST (tRNA (cytosine-5-)-methyltransferase NCL1 OS=Saccharomyces cerevisiae GN=NCL1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.358e-28 Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 1 Query: 64 VLCDVPCSGDGFLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGI 384 +LCDVPCSGDG +RK ++W+ WN G GLH++Q+ I RG+ LLK GR+VYSTCS+NP+ENEAVVAE LRK + LV+ +++P LI G+ KW V D+ + Sbjct: 254 ILCDVPCSGDGTMRKNVNVWKDWNTQAGLGLHAVQLNILNRGLHLLKNNGRLVYSTCSLNPIENEAVVAEALRKWGDKIRLVNCDDKLPGLIRSKGVSKWPVYDRNL 360
BLAST of EY675406 vs. ExPASy Swiss-Prot
Match: YF6H_SCHPO (Putative tRNA (cytosine-5-)-methyltransferase C23C4.17 OS=Schizosaccharomyces pombe GN=SPAC23C4.17 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.025e-28 Identity = 65/141 (46.10%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 64 VLCDVPCSGDGFLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIE 486 +L DVPCSGDG RK +WR+W+ LH LQ++I +RG+ LLKVGG +VYSTCS+NP+ENEAVV L+ G+V LVDVS ++P L PGL WKV D + +I + SM+P M IE Sbjct: 267 ILADVPCSGDGTFRKNLSLWREWSANSAFSLHPLQLRILIRGLQLLKVGGCLVYSTCSINPIENEAVVTAALKATGGAVSLVDVSKKLPLLKRDPGLLSWKVLDDSLNEFQSPAENTNDKIELTESMWPLPEEEMSKLHIE 407
BLAST of EY675406 vs. ExPASy Swiss-Prot
Match: NCL1_SCHPO (tRNA (cytosine-5-)-methyltransferase ncl1 OS=Schizosaccharomyces pombe GN=ncl1 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.150e-27 Identity = 57/107 (53.27%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 64 VLCDVPCSGDGFLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGI 384 +L DVPCSGDG RK +W +W++ GLH+ Q++I MRG+ LL+ GGR+VYSTCS+NP+ENEAVV+ +L GSV LVDVS+E+PQL G+ W V D + Sbjct: 237 ILADVPCSGDGTFRKNIALWNEWSLKTALGLHATQIKILMRGLQLLEKGGRLVYSTCSLNPIENEAVVSAVLNATRGSVRLVDVSSELPQLKRSQGVDNWVVCDSDL 343 The following BLAST results are available for this feature:
BLAST of EY675406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675406 ID=EY675406; Name=EY675406; organism=Citrus sinensis; type=EST; length=1081bpback to top |