EY675387

Overview
NameEY675387
Unique NameEY675387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675387 vs. ExPASy Swiss-Prot
Match: FLGK_SALTY (Flagellar hook-associated protein 1 OS=Salmonella typhimurium GN=flgK PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.358e-13
Identity = 39/107 (36.45%), Postives = 64/107 (59.81%), Query Frame = -3 
Query:  102 HIKNVTMSVYNHLRTLISSAGAHATSNGFIGRGVQVDTVVRSYDSFSYKQLVGAQGSSAQLQTQFDQISQVNNLFADRTVGIAPGLSNFFTSGNTISINPTNPXTPQ 422
            +I N  ++ Y    T+++ A +   + G+IG GV V  V R YD+F   QL GAQ  S+ L T+++Q+S+++NL AD++  ++  L +FFTS  T+  N  +P   Q
Sbjct:   25 NINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYVSGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSNAEDPAARQ 131
[Close]
BLAST of EY675387 vs. ExPASy Swiss-Prot
Match: FLGK_SALTI (Flagellar hook-associated protein 1 OS=Salmonella typhi GN=flgK PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.358e-13
Identity = 39/107 (36.45%), Postives = 64/107 (59.81%), Query Frame = -3 
Query:  102 HIKNVTMSVYNHLRTLISSAGAHATSNGFIGRGVQVDTVVRSYDSFSYKQLVGAQGSSAQLQTQFDQISQVNNLFADRTVGIAPGLSNFFTSGNTISINPTNPXTPQ 422
            +I N  ++ Y    T+++ A +   + G+IG GV V  V R YD+F   QL GAQ  S+ L T+++Q+S+++NL AD++  ++  L +FFTS  T+  N  +P   Q
Sbjct:   25 NINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYVSGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSNAEDPAARQ 131
The following BLAST results are available for this feature:
BLAST of EY675387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FLGK_SALTY1.358e-1336.45Flagellar hook-associated protein 1 OS=Salmonella ... [more]
FLGK_SALTI1.358e-1336.45Flagellar hook-associated protein 1 OS=Salmonella ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-H06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675387 ID=EY675387; Name=EY675387; organism=Citrus sinensis; type=EST; length=964bp
GTGGTCGAGATCTGCGTGTTCAGGCCCCCNNNTTGGAGGTGCATTTCCTG
GTAGGCCGAGCGGATCCCCCCTGAAGGGGTGTTGNGGTTGNNTAGNAAGT
NTTGGGGGGTGGNNGGATTGGTNGGATTGATGGATATGGTATTCCCGCTG
GTGAAGAAGTTCGACAGGCCCGGGGCGATGCCCACGGTGCGGTCGGCGAA
CAGGTTGTTGACCTGGGAGATCTGGTCGAACTGGGTCTGCAGCTGGGCGC
TGCTGCCTTGCGCGCCAACCAGCTGCTTGTACGAGAAGCTGTCGTAGCTG
CGCACCACGGTGTCCACCTGGACGCCACGGCCGATGAAGCCATTGCTGGT
CGCGTGAGCGCCAGCGGACGAGATAAGAGTGCGCAGATGGTTGTAAACCG
ACATGGTGACATTTTTGATGTGGGGGGGGGGGGGGAGGGGAAGAATGGTA
AATATATAATAGATCTGTGATTTATATAATAAAATTAATTATAAAATATT
ATTTTAGTGATCCTAGATGAATTATCTGGTTTACCAGTTCACGTTCCGTG
GGCTAGGGCAGAGGGGGTGTTCGAACTTTTAGGAGGAAGAGTAAAATAGT
GGGGAATAAGCGTGTAAAGAGATTCAATGATAAGTGATAATGGGGGTGTA
TGGAAGGATGAAAAAAAGAGAAAAAAAGGGAGAGGAGAAGAGGCGGAACA
AACCAAGCGTATGCGAAAAAAGACAAGTAAGACGCTTTGGGAAATGTAGG
GGACGACACAGAGAGAAGTATAACGTATGAAAAAAGTACAGTATTGAGCG
AGAACTGATAGGTGCTTTATATCTATGATGTTAAATTAATCATAGATAGA
GATATCGGCAAAGGAGCACATGATGAACAAAAAAGTATGAGTATGAAGCT
AGTGAAACAGAGAATTTCAAAGTATCGATATGAAATTAGGTCTTTATACT
TGATGAGCAATGAG
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