EY675347

Overview
NameEY675347
Unique NameEY675347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length945
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675347 vs. ExPASy Swiss-Prot
Match: SERC3_HUMAN (Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.457e-12
Identity = 48/170 (28.24%), Postives = 81/170 (47.65%), Query Frame = 3
Query:   30 HSGWWSAKIVPWIALTIIPFLLPSS-FIQLYGEIAHFGAGVFLLIQLISVISFI-----TWLNDCCLSEKNAERCHIHVMLIATVAXXXXXXXXXXXXXWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCN 506
            H+G+W  KI   I + +  F +P   F  ++  +   GA +F+LIQL+ ++ F      +W+N   + E N    +  ++   +               +YT    C  N FFI+  L+L  + + +S+HPKI      SG L   L+ LY ++L W A+ +EP   +CN
Sbjct:  130 HNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNR--MEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFFISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEP-DRSCN 296          
BLAST of EY675347 vs. ExPASy Swiss-Prot
Match: SERC3_BOVIN (Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.902e-12
Identity = 48/170 (28.24%), Postives = 84/170 (49.41%), Query Frame = 3
Query:   30 HSGWWSAKIVPWIALTIIPFLLPSS-FIQLYGEIAHFGAGVFLLIQLISVISFI-----TWLNDCCLSEKNAERCHIHVMLIATVAXXXXXXXXXXXXXWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCN 506
            H+G+W  KI   + + +  F +P   F   +  I   GA  F+LIQL+ ++ F      +W+N   + E N +  +  ++ + ++              +YT    C  N FFI++ L+L  +++ +S+HPKI      SG L   L+ LY ++L W A+ +EP   +CN
Sbjct:  129 HNGFWFFKIAAIVGVMVGSFYIPGGHFNTAWFVIGMVGAAFFILIQLVLLVDFAHSWNESWVNR--MEEGNPKCWYAALLSVTSLFYILSIIFAGLLYTYYTKPDGCTENKFFISFNLILCVVISVLSIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEP-DRSCN 295          
BLAST of EY675347 vs. ExPASy Swiss-Prot
Match: SERC3_PONAB (Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.245e-12
Identity = 47/170 (27.65%), Postives = 81/170 (47.65%), Query Frame = 3
Query:   30 HSGWWSAKIVPWIALTIIPFLLPSS-FIQLYGEIAHFGAGVFLLIQLISVISFI-----TWLNDCCLSEKNAERCHIHVMLIATVAXXXXXXXXXXXXXWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCN 506
            H+G+W  KI   I + +  F +P   F  ++  +   GA +F+LIQL+ ++ F      +W+N   + E N    +  ++   +               +YT    C  N FFI+  L+L  + + +S+HPKI      SG L   ++ LY ++L W A+ +EP   +CN
Sbjct:  130 HNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNR--MEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFFISINLILCVVASIISIHPKIQEHQPRSGLLQSSVITLYTMYLTWSAMSNEP-DRSCN 296          
BLAST of EY675347 vs. ExPASy Swiss-Prot
Match: SERIC_DICDI (Probable serine incorporator OS=Dictyostelium discoideum GN=serinc PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11
Identity = 49/196 (25.00%), Postives = 98/196 (50.00%), Query Frame = 3
Query:   36 GWWSAKIVPWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSE-----KNAERCHIHVMLIATVAXXXXXXXXXXXXXWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAKPSNKTNWLTIISFVVALLAIVNATF 593
            G+W  KI+    L  + F +P+SF ++Y  I+ F A +F+ IQL+ +I     LN+ C+ +      + ++ ++ + +++  +             +Y    +C +N F+I + L +  ++  +S+  K+     +SG    G++ LY  +L + AI SEP G TC+     S K + + II  V  ++++  + F
Sbjct:  104 GYWPLKILLLGVLIFVSFFIPNSFFRVYTWISIFSAAIFIFIQLVLLIECAYSLNESCVRKIEDEGHSGKKWYVLLCVLSFGSIALAVAGTVLMLVFYGRG-SCSINQFYIVFNLGICLIVGVLSISEKVREYRPSSGLFQSGVVMLYCTYLIYSAINSEPPG-TCSSNNTSSPKESTI-IIGAVFTIISVCYSAF 296          
The following BLAST results are available for this feature:
BLAST of EY675347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
SERC3_HUMAN1.457e-1228.24Serine incorporator 3 OS=Homo sapiens GN=SERINC3 P... [more]
SERC3_BOVIN1.902e-1228.24Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=... [more]
SERC3_PONAB3.245e-1227.65Serine incorporator 3 OS=Pongo abelii GN=SERINC3 P... [more]
SERIC_DICDI2.747e-1125.00Probable serine incorporator OS=Dictyostelium disc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-D05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675347 ID=EY675347; Name=EY675347; organism=Citrus sinensis; type=EST; length=945bp
CAAAGTTGCACGGGACCAGCCATTTATGGCACTCTGGATGGTGGTCTGCA
AAGATTGTCCCTTGGATTGCCTTGACAATCATCCCATTTCTTCTTCCTTC
TTCCTTTATTCAACTCTATGGGGAGATTGCTCATTTTGGTGCCGGGGTCT
TTCTACTAATTCAGCTAATAAGCGTAATCAGTTTCATTACCTGGCTGAAT
GACTGTTGTTTGTCTGAGAAGAATGCAGAAAGATGCCACATCCATGTGAT
GCTAATTGCAACAGTTGCATATATTATATGCATAGTGGGGATCATTATGA
TGTACATTTGGTATACGCCAGATCCTACTTGCCTCCTTAACATATTTTTT
ATTACATGGACTTTGGTGCTCCTCCAACTCATGACGAGTGTTTCTCTTCA
CCCAAAAATAAATTCAGGCTTCTTGGCTCCGGGGCTTATGGGGCTTTATA
TCATATTTCTCTGCTGGTGTGCCATTAGAAGTGAACCAGCAGGGGAAACT
TGCAACAGGAAGGCAAAACCTTCAAACAAAACAAACTGGCTTACTATTAT
AAGCTTTGTTGTTGCACTACTTGCAATTGTTAACGCAACCTTTTCAACAG
GCATTGATTTCCCAAGGCTTCCATTAAAGAAAAAGTGGATCCCCCGGCCA
AAAAAAGAAGTTTCCAATAGGGTTAGGGCTTCTTCCCTTTTCGTTTTTGC
CCATGGGGGGAAATGTATCTTGTAAAGGCACACTCAAGGGCGGGGAAAAT
TCATTCACCCATTTAAAAAAAGGGGAAAAATTTTATTGGGGGTTGGAAAA
AAACCCCTGGGGGGAGGAAAAATGGAAAAAAAAAGGGGGGGGGGACCCCC
TTGGGTATATAACTGTGGGAGGTGCGGGGGGGGCCGCCCCACATTCTAAT
TTGAAAAAAACAAAACCCCAAAAACCCATCTATAACACCAATTAA
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