EY675316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675316 vs. ExPASy Swiss-Prot
Match: XYLF_HAEIN (D-xylose-binding periplasmic protein OS=Haemophilus influenzae GN=xylF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.613e-31 Identity = 66/113 (58.41%), Postives = 88/113 (77.88%), Query Frame = -2 Query: 1 IGFSIDDLRVERWTRDRNYFVEAATALGAKVNVQSANASESRQIAQVENLIAEGVDALVIVPFNSKVLGSAIAKAHRNGIKVIAYDRLILGAPLDGYVSFDNMEVGEMQAQGM 339 IG SIDDLR+ERW +DR+ FV A ++GAKV VQSAN +S QI+Q+EN+I + +D LVI+P N +VL + I++A + GIKV+AYDRLI A LD YVSFDN +VGE+QA+ + Sbjct: 28 IGLSIDDLRLERWQKDRDIFVNKAESMGAKVFVQSANGDDSAQISQIENMINKNIDVLVIIPHNGEVLSNVISEAKKEGIKVLAYDRLINNADLDFYVSFDNEKVGELQAKSI 140
BLAST of EY675316 vs. ExPASy Swiss-Prot
Match: XYLF_ECOLI (D-xylose-binding periplasmic protein OS=Escherichia coli (strain K12) GN=xylF PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.163e-31 Identity = 63/113 (55.75%), Postives = 89/113 (78.76%), Query Frame = -2 Query: 1 IGFSIDDLRVERWTRDRNYFVEAATALGAKVNVQSANASESRQIAQVENLIAEGVDALVIVPFNSKVLGSAIAKAHRNGIKVIAYDRLILGAPLDGYVSFDNMEVGEMQAQGM 339 IG +IDDLR+ERW +DR+ FV+ A +LGAKV VQSAN +E Q++Q+EN+I GVD LVI+P+N +VL + + +A + GIKV+AYDR+I A +D Y+SFDN +VGE+QA+ + Sbjct: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140
BLAST of EY675316 vs. ExPASy Swiss-Prot
Match: SBPA_AZOBR (Multiple sugar-binding periplasmic protein sbpA OS=Azospirillum brasilense GN=sbpA PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.168e-13 Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = -2 Query: 13 KDAPVIGFSIDDLRVERWTRDRNYFVEAATALGAKVNVQSANASESRQIAQVENLIAEGVDALVIVPFNSKVLGSAIAKAHRNGIKVIAYDRLILGAP-LDGYVSFDNMEVGEMQ 354 +D P +G ++ RW D N V+ A G K ++Q A Q+AQ+E ++A+ LVI + L + +A G+KVIAYDRLI G+ +D Y +FDN +VG +Q Sbjct: 29 QDKPTVGIAMPTKSSARWIDDGNNMVKQFQAKGYKTDLQYAEDDIPNQLAQIETMVAKNSKVLVIAAIDGTTLTDVLQQAKDRGVKVIAYDRLIRGSENVDYYATFDNFQVGVLQ 143
BLAST of EY675316 vs. ExPASy Swiss-Prot
Match: CHVE_RHIRD (Multiple sugar-binding periplasmic receptor chvE OS=Rhizobium radiobacter GN=chvE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.992e-13 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = -2 Query: 1 DAPVIGFSIDDLRVERWTRDRNYFVEAATALGAKVNVQSANASESRQIAQVENLIAEGVDALVIVPFNSKVLGSAIAKAHRNGIKVIAYDRLILGA-PLDGYVSFDNMEVGEMQAQGM 351 D +G ++ RW D N V+ A G ++Q + Q++QVEN++ +G LVI + L + KAH GIKVIAYDRLI + +D Y +FDN +VG +QA + Sbjct: 26 DKGTVGIAMPTKASARWIDDGNNIVKQLQAAGYGTDLQYGDDDIPNQLSQVENMVTKGDKVLVIAAIDGTTLSDVLQKAHDAGIKVIAYDRLIRNSGNVDYYATFDNFKVGVLQANSI 143
BLAST of EY675316 vs. ExPASy Swiss-Prot
Match: CHVE_AGRT5 (Multiple sugar-binding periplasmic receptor chvE OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=chvE PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 5.795e-13 Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = -2 Query: 10 KDAPVIGFSIDDLRVERWTRDRNYFVEAATALGAKVNVQSANASESRQIAQVENLIAEGVDALVIVPFNSKVLGSAIAKAHRNGIKVIAYDRLILGA-PLDGYVSFDNMEVGEMQA 354 +D +G ++ RW D N V+ G K ++Q A+ Q++Q+EN++ +GV LVI + L + +A GIKVIAYDRLI + + Y +FDN +VG +QA Sbjct: 25 QDKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLIRNSGDVSYYATFDNFQVGVLQA 140 The following BLAST results are available for this feature:
BLAST of EY675316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675316 ID=EY675316; Name=EY675316; organism=Citrus sinensis; type=EST; length=1042bpback to top |