EY675307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 4.141e-64 Identity = 104/149 (69.80%), Postives = 116/149 (77.85%), Query Frame = 1 Query: 97 IGAKEMLGNPLNVSSAVRTSAPGASNPSTFKPVALFXXXXXXXXXXXXXXXXXXXNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 +G EMLG PLN + R+SAP AS+PSTFK VALF ++ELAKWYGPDRRIFLP+GLLDRSEIPEYL GEV GDYGYDPFGL KKP++F+KYQA+ELIHARWAMLGAAGFIIPEA K+GANCGPEAVWFK Sbjct: 4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSET---SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFK 149 HSP 2 Score: 53.5286 bits (127), Expect = 4.141e-64 Identity = 36/76 (47.37%), Postives = 41/76 (53.95%), Query Frame = 2 Query: 593 LWFCNVLVLQTGTLLLDGKPLNTFGKNIPITLGFCCHWENWS*RGGLKIKKPPRGLDLEDKPSPRGGHFNPLGFIK 820 +WF +TG LLLDG LN FGKNIPI L E GG + + GLD EDK P GG F+PLG K Sbjct: 146 VWF------KTGALLLDGNTLNYFGKNIPINLVLAVVAEVVL-LGGAEYYRITNGLDFEDKLHP-GGPFDPLGLAK 213
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 3.103e-19 Identity = 46/89 (51.69%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 277 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 ++YGPDR FL G ++ PEYLTGE PGDYG+D GLS P F++Y+ ELIHARWA+LGA G + PE ++ E VWFK Sbjct: 32 EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFK 118
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.293e-19 Identity = 49/88 (55.68%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 280 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 WYGPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFK 132
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.913e-19 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 280 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE F + G G EAVWFK Sbjct: 50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFK 133
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.913e-19 Identity = 49/88 (55.68%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 280 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 WYGPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFK 132
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 6.913e-19 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 280 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 WYGPDR +L +IP YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE K G G EAVWFK Sbjct: 49 WYGPDRPKYLGPF---SDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFK 132
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 9.029e-19 Identity = 47/88 (53.41%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 280 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 WYGPDR ++L E P YLTGE PGDYG+D GLS P++F+K + E+IH RWAMLGA G + PE + G G EAVWFK Sbjct: 58 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFK 141
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.179e-18 Identity = 47/88 (53.41%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 280 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 WYGPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK Sbjct: 62 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFK 145
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.540e-18 Identity = 47/88 (53.41%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 280 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 WYGPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK Sbjct: 62 WYGPDRVMYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFK 145
BLAST of EY675307 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.540e-18 Identity = 48/88 (54.55%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 280 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFYKFGANCGPEAVWFK 543 WYGPDR +L E P YLTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA G + PE + G G EAVWFK Sbjct: 52 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFK 135 The following BLAST results are available for this feature:
BLAST of EY675307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675307 ID=EY675307; Name=EY675307; organism=Citrus sinensis; type=EST; length=1028bpback to top |