EY656912

Overview
NameEY656912
Unique NameEY656912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length974
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY656912 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.040e-55
Identity = 101/148 (68.24%), Postives = 116/148 (78.38%), Query Frame = 3
Query:   12 LEIVTGTMVGVLFLVAGFTGLQRCXXXXXXXXXXXXXXXEKDH--IYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRKSSPFTRMLVF 449
            LEIVTG+MVG+L LVA F+ + R                EK+   +Y+DSE+LKDV R +RQELEVACEDFSNIIG S DS +YKGT+KGG EIAVISLC+KEE WTGYLELYFQREVADLAR+NHENT KLLGYC++ SPFTRMLVF
Sbjct:  292 LEIVTGSMVGLLLLVALFSAVHRWNNRSTLIIPWKKSSSEKEKFTVYVDSEMLKDVSRLTRQELEVACEDFSNIIGLSADSQIYKGTLKGGSEIAVISLCVKEEDWTGYLELYFQREVADLARLNHENTAKLLGYCKEISPFTRMLVF 439          

HSP 2 Score: 38.5058 bits (88), Expect = 4.040e-55
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  448 FDYASNGTLYEHLPYGERCPVS 513
            F+YASNGTLYEHL YGE   VS
Sbjct:  439 FEYASNGTLYEHLHYGEAALVS 460          
BLAST of EY656912 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.981e-21
Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 3
Query:  171 VVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRKSSPFTRMLVF 449
            V + +R ELE ACEDFSNII +     VYKGT+  G EIAV S  I E + WT  +E+ ++R++  L+RINH+N   L+GYC +  PF RM+VF
Sbjct:  371 VPKLNRSELETACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVF 464          

HSP 2 Score: 28.1054 bits (61), Expect = 2.981e-21
Identity = 14/35 (40.00%), Postives = 19/35 (54.29%), Query Frame = 1
Query:  448 FDYASNGTLY--------EHLPYGERCPVSLNTAY 528
            F+YA NGTL+        EHL +  R  + + TAY
Sbjct:  464 FEYAPNGTLFEHLHDKETEHLDWSARMRIIMGTAY 498          
BLAST of EY656912 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-20
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 3
Query:  171 VVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRKSSPFTRMLVF 449
            V + +R ELE ACEDFSNII +     VYKGT+  G EIAV S  I E   WT  +E+ ++R +  ++R+NH+N   L+GYC +  PF RM+VF
Sbjct:  388 VPKLNRSELETACEDFSNIIEAFDGYTVYKGTLSSGVEIAVASTAILETREWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNRMMVF 481          

HSP 2 Score: 28.1054 bits (61), Expect = 1.877e-20
Identity = 14/35 (40.00%), Postives = 19/35 (54.29%), Query Frame = 1
Query:  448 FDYASNGTLY--------EHLPYGERCPVSLNTAY 528
            F+YA NGTL+        EHL +  R  + + TAY
Sbjct:  481 FEYAPNGTLFEHLHDKEMEHLDWNARTRIIMGTAY 515          
The following BLAST results are available for this feature:
BLAST of EY656912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y1634_ARATH4.040e-5568.24Probable LRR receptor-like serine/threonine-protei... [more]
MRH1_ARATH2.981e-2150.00Probable LRR receptor-like serine/threonine-protei... [more]
Y5458_ARATH1.877e-2047.87Probable LRR receptor-like serine/threonine-protei... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-060-A01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY656912 ID=EY656912; Name=EY656912; organism=Citrus sinensis; type=EST; length=974bp
CCACGCGTCCGCTTGAAATAGTGACTGGAACCATGGTGGGTGTTCTCTTT
CTCGTTGCTGGTTTCACTGGACTTCAGAGATGCAAGAGCAAACCTTCCAT
AATAATCCCTTGGAAGAAATCGGCTAGTGAGAAGGATCACATATATATAG
ATTCTGAGATCTTGAAAGATGTGGTGAGATTCAGCAGACAAGAGCTGGAA
GTAGCCTGTGAAGACTTCAGCAACATCATTGGCTCTTCACCAGACAGCTT
GGTCTACAAGGGCACCATGAAGGGTGGGCCTGAGATTGCTGTAATATCCC
TCTGCATTAAAGAAGAGCATTGGACAGGCTATCTTGAGCTCTATTTCCAG
AGAGAGGTGGCAGACTTGGCAAGAATAAATCATGAGAATACAGGAAAGCT
GCTAGGCTATTGCAGAAAGAGCTCCCCATTTACAAGAATGTTGGTTTTTC
GATTATGCATCAAATGGAACTCTTTATGAGCATCTCCCTTATGGTGAACG
ATGCCCAGTATCTTTGAACACGGCGTATGAAAATTTGTAATAAGTATTGG
CCCGTGGGACTCCAGTAATCTCCTTACAAAAATTTGGGCCCTCCTTTTAC
TTATATCCAAAATTGAAATTCCTAGGGGCTGTATTTTTTTTAGGGAAAAA
TTTTTTCCCCCCAGTTTGGGGCCAATTTTTTAAAATTTTGGAAAAAAAAA
TTTTTTGGGGAAAAATGGGAAAAAAAAAAACCCCGGGGACCCTCTCTGGG
GAGGCCCCAGGGGGGGGGTTTTTTGGTGTAAATCTTTTTACAAGGTTTTT
TCCTTTTTGGGGAGGGGCCGGGGGGTTTTTTTTGGGAGAGTTGCCTCCAG
GGGGGGACAACTTTTTTTTTTATTTTCCTTTTTTGTTGGGGGGGGGCGGT
TTTTTCCTTGGGGGTGGGGGGAAGAAAAATATATAATTCCGCGGTGGGGG
GGGGGGGAAGGAACACACACCCCT
back to top