EY656904

Overview
NameEY656904
Unique NameEY656904
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY656904 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.975e-28
Identity = 58/125 (46.40%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   60 MATPATLPISNXXXXXXXXXXXXXXXXXXXXFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXXGAWIFLYLFRPSE 434
            MATP TLP++N                    FR F SRLS+SIR G SQRR W+EL+DR++M+RP+SL +A SRIRKNL+YFKVNYV                         G W+FLYLFRPS+
Sbjct:    1 MATPPTLPVTNQQAVQSQPPINTPA------FRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSD 119          

HSP 2 Score: 41.2022 bits (95), Expect = 1.975e-28
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 1
Query:  433 NQPGVLFGRKFSNRETLGALGSFDYPLPES*PVDGTLVNLHVEGPELAIECAQGGVKGFLRTVFLDKEKPPNSGIRAFPTGGRESAGA 696
            +QP V+FGR FS+RETL AL      +     V   L +  + G  +AI C  G        +FLD+++P N+G+ +F  G   SA A
Sbjct:  119 DQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIG--VAIVCVHGAFV-VPDDLFLDEQEPANAGLLSFLGGSATSAAA 203          
BLAST of EY656904 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.617e-24
Identity = 53/124 (42.74%), Postives = 68/124 (54.84%), Query Frame = 3
Query:   63 ATPATLPISNXXXXXXXXXXXXXXXXXXXXFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXXGAWIFLYLFRPSE 434
            ++PA LP++N                    FR FLSRLSSS+R   SQRR W ELVDR++ +RPDSL +++SRIRKNL+YFKVNY                          G+W+FLYLFR S+
Sbjct:    3 SSPAILPVTNQQAATQSQPPINSHA-----FRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSD 121          

HSP 2 Score: 38.1206 bits (87), Expect = 2.617e-24
Identity = 28/78 (35.90%), Postives = 41/78 (52.56%), Query Frame = 1
Query:  433 NQPGVLFGRKFSNRETLGALGSFDYPLPES*PVDGTLVNLHVEGPELAIECAQGGVKGFLRTVFLDKEKPPNSGIRAF 666
            +QP VLFGR FS+RETL  L      +     V   L +    G  +AI C  G  +     +FLD+++P N+G+ +F
Sbjct:  121 DQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIG--IAIVCLHGAFR-VPDDLFLDEQEPANAGLLSF 195          
BLAST of EY656904 vs. ExPASy Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.402e-24
Identity = 38/94 (40.43%), Postives = 60/94 (63.83%), Query Frame = 3
Query:  153 FRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXXGAWIFLYLFRPSE 434
            FR F+++++ +++ G S+RR W+EL DR+A+S+P+S+++A  RIRKN SYFKVNY+T                         +W+FLYLFRP++
Sbjct:   36 FRNFINQITETVKNGLSKRRPWAELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTD 129          

HSP 2 Score: 48.521 bits (114), Expect = 3.402e-24
Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 1
Query:  433 NQPGVLFGRKFSNRETLGALGSFDYPLPES*PVDGTLVNLHVEGPELAIECAQGGVKGFLRTVFLDKEKPPNSGIRAFPTGGRESAGAP 699
            +QP VLFGR FS+RETLG L  F   +     V   LV+  + G  +A+ CA G  +     +FLD+++P  +G  +F  GG  S+ AP
Sbjct:  129 DQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIG--VALICAHGAFRA-PEDLFLDEQEPAATGFLSF-LGGAASSAAP 213          
BLAST of EY656904 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.649e-23
Identity = 80/198 (40.40%), Postives = 91/198 (45.96%), Query Frame = 3
Query:   60 MATPATLPISNXXXXXXXXXXXXXXXXXXXXFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXXGAWIFLYLFRPSESTRGPLWP*VFQPRNARRSW*F*LSVA*VLTXXXXXXXXXXXXAGTGNRVCPRGRKRVPEDCFFGQRKTPEFG 653
            MA P TLPIS+                    FR FLSRLSSSIR   SQRR W ELVDR+A+SRP+SL +AYSRIR+NL YFKVNYVT                         AWIFLYLFRPS+     L    F  R         L++  V               G G  VC  G  RVPED F   ++    G
Sbjct:    2 MANPPTLPISDHSGGGSQSQQPVSTPA----FRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGR-TFSDRETLGVLVI-LTIVVVFLTSVGSLLTSALMIGFG-IVCLHGAFRVPEDLFLDDQEPANTG 192          
BLAST of EY656904 vs. ExPASy Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.930e-17
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 3
Query:  156 RAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXXGAWIFLYLFRPSE 434
            RAF++ ++ ++  G S+ R WSEL+DR+A ++PDSL+EA +R RKN SYF+VNYV                          +W+FLYLFRPS+
Sbjct:   37 RAFVNGVTETVCGGLSRSRPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPSD 129          

HSP 2 Score: 29.6462 bits (65), Expect = 6.930e-17
Identity = 24/78 (30.77%), Postives = 37/78 (47.44%), Query Frame = 1
Query:  433 NQPGVLFGRKFSNRETLGALGSFDYPLPES*PVDGTLVNLHVEGPELAIECAQGGVKGFLRTVFLDKEKPPNSGIRAF 666
            ++P +LFGR FS  ETLG L      +     V   L++  + G  +A  C  G  +     +FLD++    SG  +F
Sbjct:  129 DRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIG--IATICVHGAFRA-PDDLFLDEQDHAASGFLSF 203          
BLAST of EY656904 vs. ExPASy Swiss-Prot
Match: PR1B6_ARATH (PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.525e-16
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 3
Query:  156 RAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXXGAWIFLYLFRPSE 434
            R  LSR+ +++R+  +  R W+ELVDR+A SRP SL+EA SR+RKN SYF+ NY+T                         +W+FLY FRP++
Sbjct:   27 RVLLSRVLATVRHASADARPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPAD 119          

HSP 2 Score: 26.9498 bits (58), Expect = 1.525e-16
Identity = 26/91 (28.57%), Postives = 41/91 (45.05%), Query Frame = 1
Query:  433 NQPGVLFGRKFSNRETLGALGSFDYPLPES*PVDGTLVNLHVEGPELAIECAQGGVKGFLRT---VFLDKEKPPNSGIRAFPTGGRESAGA 696
            +QP V+ GR FS+ ETLG L      +     V   L++       LA+      + G  R    +FL++++   SG+ AF      +A A
Sbjct:  119 DQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMS------TLAVGIMGVAIHGAFRAPEDLFLEEQEAIGSGLFAFFNNNASNAAA 203          
The following BLAST results are available for this feature:
BLAST of EY656904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PR1B1_ARATH1.975e-2846.40PRA1 family protein B1 OS=Arabidopsis thaliana GN=... [more]
PR1B2_ARATH2.617e-2442.74PRA1 family protein B2 OS=Arabidopsis thaliana GN=... [more]
PR1B4_ARATH3.402e-2440.43PRA1 family protein B4 OS=Arabidopsis thaliana GN=... [more]
PR1B3_ARATH3.649e-2340.40PRA1 family protein B3 OS=Arabidopsis thaliana GN=... [more]
PR1B5_ARATH6.930e-1741.94PRA1 family protein B5 OS=Arabidopsis thaliana GN=... [more]
PR1B6_ARATH1.525e-1640.86PRA1 family protein B6 OS=Arabidopsis thaliana GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-087-H05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY656904 ID=EY656904; Name=EY656904; organism=Citrus sinensis; type=EST; length=743bp
CCACGCGTCCGCAGCATTGTACTTTCTCCACGCGCCACCACTAATCACAC
GCGCCACCAATGGCCACTCCAGCGACGCTCCCAATCTCAAACCCTCAGAC
CAACACCACCACCACCACAACTCAAACCCAAGCACCCATCGCCACGCCCG
CCTTCCGCGCGTTCCTGTCACGCCTCTCCTCTTCGATCCGTTATGGCTTC
TCTCAGAGACGCCACTGGTCCGAACTCGTTGACCGAACCGCCATGTCCCG
ACCCGACTCCTTAGCCGAAGCGTACTCTCGGATCCGAAAGAACCTCTCCT
ACTTCAAGGTCAATTACGTAACTTTACTCGGCCTCGTACTCGCATTCTCT
CTCCTGTCCCATCCTTTCTCTCTCCTCGTCCTGCTCTGCCTCCTAGGCGC
TTGGATCTTCCTCTACCTCTTCCGCCCTTCCGAATCAACCCGGGGTCCTC
TTTGGCCGTAAGTTTTCCAACCGCGAAACGCTCGGCGCTCTTGGTAGTTT
TGACTATCCGTTGCCTGAGTCTTGACCAGTAGACGGAACCCTGGTTAATC
TCCACGTTGAAGGGCCGGAACTGGCAATAGAGTGTGCCCAAGGGGGCGTA
AAAGGGTTCCTGAGGACTGTTTTTTTGGACAAAGAAAAACCCCCGAATTC
GGGAATCCGTGCGTTCCCCACTGGGGGGCGCGAATCTGCCGGCGCCCCCC
CTCGGTTGTGGGACCTTTGTTGGAAATAGACTCCCCGGAATAC
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