EY675276

Overview
NameEY675276
Unique NameEY675276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1004
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDX1_HEVBR (Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis GN=PDX1 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.957e-91
Identity = 180/220 (81.82%), Postives = 186/220 (84.55%), Query Frame = 2
Query:   50 MAGTGVVAVYGNDGTITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGISSKRGSTCGL*WGILGF*RKWTKTKCSLFQKKYRPPKNLVMQKNQLG 709
            MAGTGVVAVYGN G ITETKKSPFSVKVGLAQMLRGGVIMDVV PEQAR+AEEAGACAVMALERVPADIR+QGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG   +         G +   R     +   F KK   P +LVMQ  QLG
Sbjct:    1 MAGTGVVAVYGN-GAITETKKSPFSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHVRSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG 219          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDX13_ARATH (Pyridoxal biosynthesis protein PDX1.3 OS=Arabidopsis thaliana GN=PDX13 PE=1 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 6.380e-86
Identity = 171/220 (77.73%), Postives = 182/220 (82.73%), Query Frame = 2
Query:   50 MAGTGVVAVYGNDGTITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGISSKRGSTCGL*WGILGF*RKWTKTKCSLFQKKYRPPKNLVMQKNQLG 709
            M GTGVVAVYGN G ITE KKSPFSVKVGLAQMLRGGVIMDVV  EQAR+AEEAGACAVMALERVPADIR+QGGVARMSDPQ+IKEIKQ+VTIPVMAKARIGHFVEAQILEAIGIDY+DESEVLT ADE++HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG   +         G +   R     +   F KK   P +LVMQ  QLG
Sbjct:    1 MEGTGVVAVYGN-GAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLG 219          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDX11_ARATH (Pyridoxal biosynthesis protein PDX1.1 OS=Arabidopsis thaliana GN=PDX11 PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 2.269e-83
Identity = 166/221 (75.11%), Postives = 183/221 (82.81%), Query Frame = 2
Query:   50 MAGTGVVAVYGNDGTITETK-KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGISSKRGSTCGL*WGILGF*RKWTKTKCSLFQKKYRPPKNLVMQKNQLG 709
            MAGTGVVAVYG +G +TETK KSPFSVKVGLAQMLRGGVIMDVV  EQAR+AEEAGACAVMALERVPADIR+QGGVARMSDP++IKEIK +VTIPVMAKARIGHFVEAQILEAIG+DYVDESEVLT ADE+NHINKHNF+IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG   +         G +   R     +   + KK   P +LV+Q  +LG
Sbjct:    1 MAGTGVVAVYG-EGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADEDNHINKHNFKIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQTKELG 220          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDX1_PHAVU (Pyridoxal biosynthesis protein PDX1 OS=Phaseolus vulgaris GN=PDX1 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 8.623e-83
Identity = 164/218 (75.23%), Postives = 177/218 (81.19%), Query Frame = 2
Query:   56 GTGVVAVYGNDGTITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGISSKRGSTCGL*WGILGF*RKWTKTKCSLFQKKYRPPKNLVMQKNQLG 709
            G+ VVA+Y  +G ITETKKSPFSVKVGLAQMLRGGVIMDVV  +QAR+AEEAGACAVMALERVPADIR+QGGVARMSDPQLIKEIK++VTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLT AD+ NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG   +           +   R     +   F K    P +LVMQ  QLG
Sbjct:    5 GSRVVALYDGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMSDIRVLRNMDDDEVFTFAKSIAAPYDLVMQTKQLG 222          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDX1_GINBI (Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba GN=PDX1 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.683e-78
Identity = 164/225 (72.89%), Postives = 177/225 (78.67%), Query Frame = 2
Query:   50 MAGTGVVAVYGNDGTITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG--ISSKRGSTCGL*WGILGF*RKWTK---TKCSLFQKKYRPPKNLVMQKNQLG 709
            MA  GVV VYG DG IT+TK S ++VKVGLAQMLRGGVIMDVV  EQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP LIKEIK +VTIPVMAKARIGHFVEAQILEAIGIDY+DESEVLTPAD+ +HINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTG  I + R         +LG  RK       +   F K+   P  LV Q  QLG
Sbjct:    1 MASDGVVTVYG-DGAITDTKVSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAQGGVARMSDPGLIKEIKSAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTPADDXHHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVIEAVRHVR-----SVLGDIRKLQSLDDDEVFAFAKQIAAPYELVRQTKQLG 219          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDX11_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.1 OS=Oryza sativa subsp. japonica GN=PDX11 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 3.174e-77
Identity = 157/224 (70.09%), Postives = 176/224 (78.57%), Query Frame = 2
Query:   56 GTGVVAVYG---NDGTITET---KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGISSKRGSTCGL*WGILGF*RKWTKTKCSLFQKKYRPPKNLVMQKNQLG 709
            GTGVV VYG   N   + E    K + FSVKVGLAQMLRGGVIMDVVTPEQAR+AEEAGACAVMALERVPADIR+QGGVARMSDP LI++IK++VTIPVMAKARIGHFVEAQILEAIG+DYVDESEVLT AD+ +HINKHNFR+PFVCGCR+LGEALRRIREGAAMIRTKGEAGTG   +         G +   R     +   + K+   P +LVMQ  QLG
Sbjct:    5 GTGVVTVYGSGTNGAALLEPSNHKSATFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADDAHHINKHNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVMGDIRALRNMDDDEVFSYAKRIAAPYDLVMQTKQLG 228          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDX12_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.2 OS=Oryza sativa subsp. japonica GN=PDX12 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 7.817e-76
Identity = 153/218 (70.18%), Postives = 173/218 (79.36%), Query Frame = 2
Query:   56 GTGVVAVYGNDGTITETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGISSKRGSTCGL*WGILGF*RKWTKTKCSLFQKKYRPPKNLVMQKNQLG 709
            GT VVA+YG    ++  K   FSVKVGLAQMLRGGVIMDVVTPEQAR+AEEAGACAVMALERVPADIR+QGGVARMSDP LI++IK+SVTIPVMAKARIGH VEAQILEAIG+DYVDESEVLT AD+ +HINK+NFR+PFVCGCR+LGEALRRIREGAAMIRTKGEAGTG   +         G +   R     +   + K+   P +LVMQ  QLG
Sbjct:    5 GTDVVALYGGANGLSH-KSGSFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRSVTIPVMAKARIGHLVEAQILEAIGVDYVDESEVLTLADDAHHINKNNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVMGDIRALRSMDDDEVFSYAKRIAAPYDLVMQTKQLG 221          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAD (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pdxS PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 5.064e-74
Identity = 132/153 (86.27%), Postives = 146/153 (95.42%), Query Frame = 2
Query:  107 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            +KS ++ KVGLAQML+GGVIMDVVTPEQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP+LI  IKQ+VTIPVMAKARIGHFVEAQ+LEAIG+DY+DESEVLTPADEE+HINKH FR+PFVCGCRNLGEALRRI EGAAM+RTKGEAGTG
Sbjct:    2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTG 154          

HSP 2 Score: 31.187 bits (69), Expect = 5.064e-74
Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+++E  +H RAV  +IR L+ M++DE+
Sbjct:  154 GNVVEAVRHARAVYSEIRRLQSMNEDEL 181          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_ROSS1 (Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus sp. (strain RS-1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.064e-74
Identity = 131/152 (86.18%), Postives = 145/152 (95.39%), Query Frame = 2
Query:  110 KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            KS ++ KVGLAQML+GGVIMDVVTPEQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP+LI  IK++VTIPVMAKARIGHFVEAQILEA+GIDY+DESEVLTPADEE+HINKH FR+PFVCGCRNLGEALRR+ EGAAM+RTKGEAGTG
Sbjct:    3 KSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKEAVTIPVMAKARIGHFVEAQILEALGIDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTG 154          

HSP 2 Score: 33.113 bits (74), Expect = 5.064e-74
Identity = 13/28 (46.43%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+++E  +H RAV  +IR L+ MD+DE+
Sbjct:  154 GNVVEAVRHARAVYSEIRRLQSMDEDEL 181          
BLAST of EY675276 vs. ExPASy Swiss-Prot
Match: PDXS_CHLSY (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pdxS PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 6.604e-74
Identity = 131/153 (85.62%), Postives = 146/153 (95.42%), Query Frame = 2
Query:  107 KKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 565
            +KS ++ KVGLAQML+GGVIMDVVTPEQAR+AEEAGA AVMALERVPADIR+QGGVARMSDP+LI  IKQ+VTIPVMAKARIGHFVEAQ+LEAIG+DY+DESEVLTPADEE+HINKH FR+PFVCGCRNLGEALRR+ EGAAM+RTKGEAGTG
Sbjct:    2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTG 154          

HSP 2 Score: 31.187 bits (69), Expect = 6.604e-74
Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  562 GDIIETGKHVRAVMGDIRVLKKMDKDEV 645
            G+++E  +H RAV  +IR L+ M++DE+
Sbjct:  154 GNVVEAVRHARAVYSEIRRLQSMNEDEL 181          
The following BLAST results are available for this feature:
BLAST of EY675276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
PDX1_HEVBR2.957e-9181.82Probable pyridoxal biosynthesis protein PDX1 OS=He... [more]
PDX13_ARATH6.380e-8677.73Pyridoxal biosynthesis protein PDX1.3 OS=Arabidops... [more]
PDX11_ARATH2.269e-8375.11Pyridoxal biosynthesis protein PDX1.1 OS=Arabidops... [more]
PDX1_PHAVU8.623e-8375.23Pyridoxal biosynthesis protein PDX1 OS=Phaseolus v... [more]
PDX1_GINBI1.683e-7872.89Probable pyridoxal biosynthesis protein PDX1 OS=Gi... [more]
PDX11_ORYSJ3.174e-7770.09Probable pyridoxal biosynthesis protein PDX1.1 OS=... [more]
PDX12_ORYSJ7.817e-7670.18Probable pyridoxal biosynthesis protein PDX1.2 OS=... [more]
PDXS_CHLAD5.064e-7486.27Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus ... [more]
PDXS_ROSS15.064e-7486.18Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus s... [more]
PDXS_CHLSY6.604e-7485.62Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-E05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675276 ID=EY675276; Name=EY675276; organism=Citrus sinensis; type=EST; length=1004bp
AAATTACATCTCTTCCCTCAAACACTTTTTCCTTCTCGCTATCGGCGTAA
TGGCAGGTACCGGAGTGGTGGCAGTCTACGGTAATGACGGCACTATAACG
GAGACTAAAAAATCTCCATTCTCCGTTAAAGTCGGTCTAGCTCAGATGCT
TCGGGGTGGCGTTATAATGGACGTAGTTACTCCCGAGCAAGCACGAGTCG
CGGAAGAGGCTGGTGCGTGCGCCGTCATGGCTCTTGAGCGCGTCCCCGCC
GATATCCGCTCGCAAGGCGGCGTGGCTCGCATGTCTGACCCGCAACTTAT
CAAGGAAATCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTA
TTGGCCACTTTGTCGAAGCTCAAATTCTCGAAGCTATTGGGATCGATTAC
GTCGACGAGAGCGAAGTCTTGACTCCCGCCGACGAAGAGAATCACATCAA
CAAGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACTTGGGGG
AAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACGAAAGGC
GAGGCCGGAACGGGGATATCATCGAAACGGGGAAGCACGTGCGGGCTGTG
ATGGGGGATATTAGGGTTCTGAAGAAAATGGACAAAGACGAAGTGTTCCC
TTTTCCAAAAAAAATACCGGCCCCCTAAAAATTTGGTGATGCAAAAAAAC
CAACTGGGGGGGGTTTGCCGGGGGGGCCCTTTTCCCAGCGGGGAGAATGG
GGGAACCCCCGGGGGAATGGCGGGAAATAATAATGCAAAATTGGGAAGCG
CACCGGAATGGTTTGTCGGGGGCCGGGGGGGGTTTTTAAAAAAGGGGGGG
GAACCCCCGGGGGAAAAGGGGGGCCCCAAGACAAATTTTTTACAGGGGGG
GGGGGGGAAACCCTTTATTAAAAGTGGAGACCCCCCCGGGGGGGGGGTTT
GGGGGGGGGAGAAGGAGGGAAGAACGCTGGCGGGGGGGGGTGGTGGGGGG
GGGG
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