EY675270

Overview
NameEY675270
Unique NameEY675270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675270 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 2.518e-71
Identity = 121/161 (75.16%), Postives = 136/161 (84.47%), Query Frame = 1
Query:   55 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAG 537
            M KGPGLY+EIGKKARDLLYKDYQSDHKF++TTY+  GV ITSSG KKG+LFLADV+TQLKNKN+TTD+KVDTNSNLFTTITVDE APGLK+I SF VPDQRSGK+E+QY H+YAGI T +G TANPI            ALGTD+SFDT TG+FTKCNAG
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAG 161          

HSP 2 Score: 39.6614 bits (91), Expect = 2.518e-71
Identity = 21/40 (52.50%), Postives = 27/40 (67.50%), Query Frame = 2
Query:  536 GLSYTHIDLIASPGHLNDKGDPLNAFHYHFGRPLDQTRCG 655
            GLS+T+ DL+AS  +LN+KGD L A +YH   PL  T  G
Sbjct:  161 GLSFTNADLVASL-NLNNKGDNLTASYYHTVSPLTSTAVG 199          
BLAST of EY675270 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 5.852e-71
Identity = 147/228 (64.47%), Postives = 163/228 (71.49%), Query Frame = 1
Query:   55 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGAELYTY*PHCFPWTFE*QR*PP*CFXXXXXXXXXXXXXWGAELTHSFSRQRETL*KIEPTLALDPLT 738
            MVKGPGLYS+IGKKARDLLY+DY SDHKFTVTTY++ GVAIT+SG+KKGELFLADVSTQLKNKNITTDVKVDTNSN++TTITVDEPAPGLK+IFSF+VPDQ+SGKVELQY HEYAGI+T IG TA+P+            ALGTDLSFDTATGNFTKCNAG    +             +                    GAELTHSFS    TL  I     LDPLT
Sbjct:    1 MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSS--SDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTL-TIGTQHLLDPLT 225          
BLAST of EY675270 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 5.036e-63
Identity = 114/160 (71.25%), Postives = 128/160 (80.00%), Query Frame = 1
Query:   55 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNA 534
            MVKGPGLY++IGKKARDLLYKDY SD KFT++TY+  GVAITSSG KKGELFL DV+TQLKNKNITTD+KVDTNSNLFTTITV+EPAPG+K+I SF VP+Q SGKVELQY HEYAGIS+ +G  ANPI            A G D+SFDT  G  TK NA
Sbjct:    1 MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNA 160          

HSP 2 Score: 30.0314 bits (66), Expect = 5.036e-63
Identity = 17/39 (43.59%), Postives = 23/39 (58.97%), Query Frame = 2
Query:  539 LSYTHIDLIASPGHLNDKGDPLNAFHYHFGRPLDQTRCG 655
            +++   DLI S   LN+KGD L+A +YH   PL  T  G
Sbjct:  162 VNFVKDDLIGSLT-LNEKGDLLSASYYHAINPLSNTAVG 199          
BLAST of EY675270 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 4.584e-61
Identity = 107/161 (66.46%), Postives = 124/161 (77.02%), Query Frame = 1
Query:   55 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAG 537
            MVKGPGLY+EIGKKARDLLYKD+ SD KF++TT++ AGVAITS+G KKG+L L DV+ Q + KNITTD+KV T+S    T TVDE APGL+SIFSF VPDQ SGKVELQY HEYAGIST +G T NP             A+GTD+SFDT +GNFTK NAG
Sbjct:    1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAG 161          

HSP 2 Score: 40.4318 bits (93), Expect = 4.584e-61
Identity = 23/40 (57.50%), Postives = 26/40 (65.00%), Query Frame = 2
Query:  536 GLSYTHIDLIASPGHLNDKGDPLNAFHYHFGRPLDQTRCG 655
            GLS+T  DLIAS   +NDKGD LNA +YH   PL  T  G
Sbjct:  161 GLSFTKEDLIASLT-VNDKGDLLNASYYHIVNPLFNTAVG 199          
BLAST of EY675270 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 210.305 bits (534), Expect = 1.006e-57
Identity = 100/158 (63.29%), Postives = 121/158 (76.58%), Query Frame = 1
Query:   64 GPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAG 537
            GPGLY EIGKKARDLLY+DYQ+DHKFT+TTYTS GVAIT++  KK +L   ++ +Q+KNKNIT DVK +++SN+ TT+TVDE  PGLKSI SF VPDQRSGK ELQY H+YAG+S  IG TA+P+            A+G D+S DTATGN TK NAG
Sbjct:    3 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAG 160          

HSP 2 Score: 33.113 bits (74), Expect = 1.006e-57
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 2
Query:  536 GLSYTHIDLIASPGHLNDKGDPLNAFHYH 622
            GLS+++ DLIAS  +LN+KGD L A +YH
Sbjct:  160 GLSFSNDDLIASL-NLNNKGDSLTASYYH 187          
BLAST of EY675270 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 2.024e-55
Identity = 100/161 (62.11%), Postives = 122/161 (75.78%), Query Frame = 1
Query:   55 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAG 537
            MVKGPGLY+EIGKKARDLLY+DYQ D KF+VTTY+S GVAIT++G  KG LFL DV+TQ+KN N T DVKV T+S+L TT+T DEPAPGLK I    +PD +SGK E+QY H+YAGIST +GFTA PI            +LGTD++++T +GNF   NAG
Sbjct:    1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAG 161          

HSP 2 Score: 28.4906 bits (62), Expect = 2.024e-55
Identity = 16/33 (48.48%), Postives = 20/33 (60.61%), Query Frame = 2
Query:  536 GLSYTHIDLIASPGHLNDKGDPLNAFHYHFGRP 634
            G ++T  DL AS   LNDKG+ LNA +Y    P
Sbjct:  161 GFNFTKDDLTASL-ILNDKGEKLNASYYQIVSP 192          
BLAST of EY675270 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 8.223e-49
Identity = 111/226 (49.12%), Postives = 138/226 (61.06%), Query Frame = 1
Query:   64 GPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDE-PAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGAELYTY*PHCFPWTFE*QR*PP*CFXXXXXXXXXXXXXWGAELTHSFSRQRETL*KIEPTLALDPLT 738
            GPGLYS IGKKA+DLLY+DYQ+DHKFT+TTYT+ G AIT++  KK +L + ++ +Q+KNKNIT DVK ++ SN+ TTIT D+  APGLK+I SF VPDQ+SGKVELQY H+YAGI+  IG TANP+            A+G D+S DTAT NF K NA     +Y       +                         GAELTHSFS    +L        LDPLT
Sbjct:    3 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAA---LSYTNQDLIASLNLNNKGDSLTASYYHIVEKSGTAVGAELTHSFSSNENSL-TFGTQHTLDPLT 224          
BLAST of EY675270 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.554e-46
Identity = 86/165 (52.12%), Postives = 113/165 (68.48%), Query Frame = 1
Query:   55 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDE-PAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGAEL 546
            MV   GLY++IGKK RDLLYKDY +  KF +TT +  GVAIT++G +K E    ++ TQ+KNK +T DVK ++ S+L TTITVDE   PGLKSI + +VPDQRSGK+E QY HEYAG++  +G  +NP+            ++G D+SFDTAT +FTK NA   L
Sbjct:    1 MVVAVGLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSL 165          

HSP 2 Score: 29.6462 bits (65), Expect = 5.554e-46
Identity = 19/39 (48.72%), Postives = 22/39 (56.41%), Query Frame = 2
Query:  539 LSYTHIDLIASPGHLNDKGDPLNAFHYHFGRPLDQTRCG 655
            LS T  DLIAS  HLN+ GD L A +YH  +    T  G
Sbjct:  163 LSLTSPDLIASL-HLNNHGDTLVASYYHLVKNHSGTAVG 200          
The following BLAST results are available for this feature:
BLAST of EY675270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VDAC1_SOLTU2.518e-7175.16Mitochondrial outer membrane protein porin of 34 k... [more]
VDAC2_SOLTU5.852e-7164.47Mitochondrial outer membrane protein porin of 36 k... [more]
VDAC_PEA5.036e-6371.25Outer plastidial membrane protein porin OS=Pisum s... [more]
VDAC1_ARATH4.584e-6166.46Mitochondrial outer membrane protein porin 1 OS=Ar... [more]
VDAC1_ORYSJ1.006e-5763.29Mitochondrial outer membrane protein porin OS=Oryz... [more]
VDAC2_ARATH2.024e-5562.11Mitochondrial outer membrane protein porin 2 OS=Ar... [more]
VDAC1_WHEAT8.223e-4949.12Mitochondrial outer membrane porin OS=Triticum aes... [more]
VDAC_MAIZE5.554e-4652.12Outer plastidial membrane protein porin OS=Zea may... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-D10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675270 ID=EY675270; Name=EY675270; organism=Citrus sinensis; type=EST; length=1015bp
AATAATCAAAACTGATCTTTCTCAGCGTTTCCTTTCCATTTTCTCTGGAG
AATCATGGTGAAAGGCCCCGGGCTCTACTCTGAAATCGGCAAGAAAGCCC
GAGATCTTCTCTACAAGGACTACCAGAGCGACCACAAGTTCACTGTCACT
ACTTACACGTCAGCTGGAGTCGCGATAACTTCGAGTGGTGTTAAGAAAGG
TGAGCTTTTTTTGGCTGATGTCAGCACTCAGTTGAAGAACAAGAACATCA
CTACTGATGTTAAAGTTGATACTAACTCTAATCTTTTTACAACCATCACT
GTCGATGAGCCTGCTCCTGGACTCAAGTCAATCTTTAGCTTTATCGTTCC
TGATCAGAGATCTGGCAAGGTGGAACTCCAATATCAGCATGAATATGCTG
GAATAAGCACTGGCATTGGATTCACTGCAAATCCCATTGTTAACTTTTCT
GGTGTGGTTGGAAACAATTCTGTTGCTCTTGGGACTGATCTCTCATTTGA
TACTGCCACTGGCAACTTCACCAAGTGCAATGCGGGGGCTGAGCTATACA
CATATTGACCTCATTGCTTCCCCTGGACATTTGAATGACAAAGGTGACCC
CCTTAATGCTTTCCACTACCACTTTGGTAGGCCCCTTGACCAAACCCGCT
GTGGGGGGCGGAACTGACCCATAGCTTTTCAAGGCAACGAGAAACCCTCT
GAAAAATCGAACCCACCCTGGCTCTGGATCCTTTAACCCCGGGGAAAGGG
CCCGGGGGAAAAAAAATATGGGGGGGGGAAGGGGGCCCTTATCCCAGCAC
AGAGGGGGGGCCCCCAAATCCCTTTTTTTAAATCCAGGGGAAAGGGTAAA
CCCCGGGGGCCTTGAGAAAAAAGGGGGAAAAAAGGGGGGGGGGGGGTTGT
TCCCCCCGGAGCCAAAGGGGATAAAAAATTTAATATTTGGGGGGGCTGGG
GGGGGGAGAGGGGAAAAAAAAAAACAGGTTTGTTTTTTGGGGGGGTGGGG
GGGGGAAATCACACC
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