EY675236

Overview
NameEY675236
Unique NameEY675236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.658e-24
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = 1 
Query:   19 ARTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVP---KELSPGPSRNQLGTHNYGLSRVSSFLNGYT-------QSYNP--------SSVGGYG 387
            +R+ KIFVGG+     E++ K+YF++FG++T+VV++YD   QRPRGFGFIT++ E++VD+ +   FH++ GK VEVKRA P   K  +PGP     G++ +G   + S  NG+T       Q Y+P         ++GGYG
Sbjct:  111 SRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQTPGPP----GSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGYG 247

HSP 2 Score: 70.8626 bits (172), Expect = 1.221e-11
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLG 300
            K+FVGGL  + T+   + YF Q+G + D V+M D  T + RGFGF+ +     V  VL    H L+G+ ++ K   P+ + P  SR + G
Sbjct:   11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREG 100
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.064e-23
Identity = 58/146 (39.73%), Postives = 88/146 (60.27%), Query Frame = 1 
Query:   19 ARTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLGTHNYGLSRVSSFLNGYTQSYNPSSVGGYGLRN*WVDNGPVYHWGVIGIPTIG 456
            +++ KIFVGG+     E++ ++YF +FG++T+VV++YD   QRPRGFGFIT++ E++VD+ +   FH++ GK VEVKRA P++ S   +  Q G   +G   V +  NG+     P+   GYG +  WV  G     G  G P  G
Sbjct:  110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD-SKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAI--GGYGPPPAG 252

HSP 2 Score: 69.707 bits (169), Expect = 2.719e-11
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLG 300
            K+FVGGL  + T+   + YF Q+G + D V+M D  T + RGFGF+ +     V  VL    H L+G+ ++ K   P+ + P  +R + G
Sbjct:   11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.390e-23
Identity = 58/146 (39.73%), Postives = 87/146 (59.59%), Query Frame = 1 
Query:   19 ARTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLGTHNYGLSRVSSFLNGYTQSYNPSSVGGYGLRN*WVDNGPVYHWGVIGIPTIG 456
            +++ KIFVGG+     E++ ++YF +FG++T+VV++YD   QRPRGFGFIT++ E++VD+ +   FH++ GK VEVKRA P++ S   +  Q G   +G     S  NG+     P+   GYG +  WV  G     G  G P  G
Sbjct:  110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD-SKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAI--GGYGPPPAG 252

HSP 2 Score: 69.707 bits (169), Expect = 2.719e-11
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLG 300
            K+FVGGL  + T+   + YF Q+G + D V+M D  T + RGFGF+ +     V  VL    H L+G+ ++ K   P+ + P  +R + G
Sbjct:   11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: MSI1H_HUMAN (RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.628e-22
Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 1 
Query:   22 RTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE-LSP-GPSRNQLGTHNYGL 318
            RTKKIFVGGL+   T  D K+YF+QFG + D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A PKE +SP G +R +     YG+
Sbjct:  107 RTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 207

HSP 2 Score: 77.411 bits (189), Expect = 1.304e-13
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 276
            K+F+GGL+   T+   ++YF QFG + + +VM D  T+R RGFGF+T+  +  VDKVL ++ HEL+ K ++ K A P+   P
Sbjct:   21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: MSI1H_RAT (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.301e-21
Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 1 
Query:   22 RTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE-LSP-GPSRNQLGTHNYGL 318
            RTKKIFVGGL+   T  D K YF+QFG + D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A PKE +SP G +R +     YG+
Sbjct:  107 RTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 207

HSP 2 Score: 77.411 bits (189), Expect = 1.304e-13
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 276
            K+F+GGL+   T+   ++YF QFG + + +VM D  T+R RGFGF+T+  +  VDKVL ++ HEL+ K ++ K A P+   P
Sbjct:   21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: MSI1H_MOUSE (RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.301e-21
Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 1 
Query:   22 RTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE-LSP-GPSRNQLGTHNYGL 318
            RTKKIFVGGL+   T  D K YF+QFG + D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A PKE +SP G +R +     YG+
Sbjct:  107 RTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 207

HSP 2 Score: 77.411 bits (189), Expect = 1.304e-13
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 276
            K+F+GGL+   T+   ++YF QFG + + +VM D  T+R RGFGF+T+  +  VDKVL ++ HEL+ K ++ K A P+   P
Sbjct:   21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.699e-21
Identity = 49/83 (59.04%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:   22 RTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL 270
            RTKKIFVGGL++  T  D K YF+QFG I D ++M+D  T R RGFGF+T+ SE+ VDKV    FHE+N KMVE K+A PKE+
Sbjct:  116 RTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEV 198

HSP 2 Score: 76.6406 bits (187), Expect = 2.225e-13
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 276
            K+F+GGL+   +    + YF ++G I++ +VM D  T+R RGFGF+T+    +VDKVL +  HEL+GK V+ K A P+   P
Sbjct:   30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHP 111
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.457e-21
Identity = 54/123 (43.90%), Postives = 77/123 (62.60%), Query Frame = 1 
Query:   22 RTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE-LSPGPSRNQLGTHNYGLSRVSSFLNGYTQSYNPSSVGGYG 387
            RTKKIFVGGL++     D K+YF+QFG + D ++M+D  T R RGFGF+T+++E+ V+KV    FHE+N KMVE K+A PKE + P  +R +     Y    + +F+ G      P+ V  YG
Sbjct:  108 RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPY---TMDAFMLGMGMLGYPNFVATYG 227

HSP 2 Score: 73.1738 bits (178), Expect = 2.459e-12
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 276
            K+F+GGL+   +    + YF +FG I + +VM D  T+R RGFGF+T+    +VDKVL +  HEL+ K ++ K A P+   P
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.457e-21
Identity = 54/123 (43.90%), Postives = 77/123 (62.60%), Query Frame = 1 
Query:   22 RTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE-LSPGPSRNQLGTHNYGLSRVSSFLNGYTQSYNPSSVGGYG 387
            RTKKIFVGGL++     D K+YF+QFG + D ++M+D  T R RGFGF+T+++E+ V+KV    FHE+N KMVE K+A PKE + P  +R +     Y    + +F+ G      P+ V  YG
Sbjct:  108 RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPY---TMDAFMLGMGMLGYPNFVATYG 227

HSP 2 Score: 73.1738 bits (178), Expect = 2.459e-12
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 276
            K+F+GGL+   +    + YF +FG I + +VM D  T+R RGFGF+T+    +VDKVL +  HEL+ K ++ K A P+   P
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103
[Close]
BLAST of EY675236 vs. ExPASy Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.297e-18
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 1 
Query:   22 RTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPK-ELSPGPSRNQLGTHNYGLSRVSSFLNGY 348
            +T K+FVGG+    TE +F+ +F+QFG + D  +M D +T RPRGFGF+TY++E AV+  + + +  ++GK VEVKRA PK  L     R+Q G H       +  +N Y
Sbjct:  245 KTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPKASLRDSHDRHQHGYHGNANPYYAQNMNMY 354

HSP 2 Score: 77.0258 bits (188), Expect = 1.703e-13
Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 1 
Query:   31 KIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE 267
            K+F+GGL    T+   + YF+QFG + D  VM D  T R RGFGF+T+ + + V++V+ K  H L+GK+++ KRA+P+E
Sbjct:  164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKE-HHLDGKIIDPKRAIPRE 241
The following BLAST results are available for this feature:
BLAST of EY675236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
DAZP1_XENLA3.658e-2441.84DAZ-associated protein 1 OS=Xenopus laevis GN=daza... [more]
DAZP1_HUMAN1.064e-2339.73DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1... [more]
DAZP1_MOUSE1.390e-2339.73DAZ-associated protein 1 OS=Mus musculus GN=Dazap1... [more]
MSI1H_HUMAN7.628e-2252.48RNA-binding protein Musashi homolog 1 OS=Homo sapi... [more]
MSI1H_RAT1.301e-2152.48RNA-binding protein Musashi homolog 1 OS=Rattus no... [more]
MSI1H_MOUSE1.301e-2152.48RNA-binding protein Musashi homolog 1 OS=Mus muscu... [more]
MSIR6_DROME1.699e-2159.04RNA-binding protein Musashi homolog Rbp6 OS=Drosop... [more]
MSI2H_MOUSE6.457e-2143.90RNA-binding protein Musashi homolog 2 OS=Mus muscu... [more]
MSI2H_HUMAN6.457e-2143.90RNA-binding protein Musashi homolog 2 OS=Homo sapi... [more]
YHKF_SCHPO2.297e-1841.82Uncharacterized RNA-binding protein C660.15 OS=Sch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-A02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675236 ID=EY675236; Name=EY675236; organism=Citrus sinensis; type=EST; length=938bp
ACGGGTCACCTGCCTCCTGCCCGCACAAAGAAGATATTTGTAGGAGGTTT
AGCATCTACAGTCACAGAGAGTGACTTTAAGAAGTACTTTGATCAGTTTG
GGATTATCACAGATGTTGTGGTGATGTATGACCACAACACTCAAAGGCCT
CGAGGTTTTGGATTCATTACTTATGATTCAGAGGAAGCAGTGGATAAAGT
GTTGCTCAAAACCTTTCACGAACTCAATGGTAAAATGGTTGAGGTCAAAC
GGGCTGTCCCCAAAGAATTATCTCCTGGGCCAAGCCGGAACCAGTTAGGC
ACACATAATTATGGTCTGAGTAGAGTCAGTAGCTTCCTTAATGGTTACAC
TCAGAGTTATAATCCAAGTTCTGTTGGTGGATATGGACTTAGAAATTGAT
GGGTAGATAATGGTCCAGTTTACCATTGGGGCGTAATTGGAATTCCTACA
ATTGGGTCCTGGTTATGGTATGGGGACTCAACTTTGAAGCCAAATTTTAA
CCCAAGTTCATGGAGGAGGTGCAAACCTTTATTCCTAATCTCCGCCTATG
GTCGGGGAACTGAACCCCTTTCTTTTGGTGGAAATTTTCAAACAGGGAAT
AACAACCCCAGTTACCTATTGGGGGGCTGGTAACGGGAGGAAAAAATTTC
TGGCCCTTGAATCCACCTAACATGGAATTTTTGGGGGGAAAGGGGAAATC
CTTAATTTTAGCCCTTTAACAACCAGACAAAAACTCAAATAGGTTTTTTT
TGGGGCCTAACGGAGGGGGGGGAAATTTTCCGGGAAAGAGGGGTTTCTCT
GGGGGTGACACCTATGGAGCACCTTTTAAGGAGGATTCACTCCTCTCCGG
GATGTATGGGTTGATACGGAAAGGGGAGAGAGCACTGGGGTGGAGTGTTG
GTTATTATAGAAAAATGTGTNGAAACACTGTCTTAATA
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