EY675235

Overview
NameEY675235
Unique NameEY675235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length969
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.047e-24
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = 1 
Query:   34 ARTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVP---KELSPGPSRNQLGTHNYGLSRVSSFLNGYT-------QSYNP--------SSVGGYG 402
            +R+ KIFVGG+     E++ K+YF++FG++T+VV++YD   QRPRGFGFIT++ E++VD+ +   FH++ GK VEVKRA P   K  +PGP     G++ +G   + S  NG+T       Q Y+P         ++GGYG
Sbjct:  111 SRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQTPGPP----GSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGYG 247

HSP 2 Score: 70.4774 bits (171), Expect = 1.684e-11
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLG 315
            K+FVGGL  + T+   + YF Q+G + D V+M D  T + RGFGF+ +     V  VL    H L+G+ ++ K   P+ + P  SR + G
Sbjct:   11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREG 100
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: MSI1H_HUMAN (RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.624e-22
Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 1 
Query:    1 PRVRFTGHLPP---ARTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE-LSP-GPSRNQLGTHNYGL 333
            P+V F     P    RTKKIFVGGL+   T  D K+YF+QFG + D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A PKE +SP G +R +     YG+
Sbjct:   92 PKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 207

HSP 2 Score: 77.0258 bits (188), Expect = 1.799e-13
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 291
            K+F+GGL+   T+   ++YF QFG + + +VM D  T+R RGFGF+T+  +  VDKVL ++ HEL+ K ++ K A P+   P
Sbjct:   21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: MSI1H_RAT (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.770e-22
Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:    1 PRVRFTGHLPP---ARTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE-LSP-GPSRNQLGTHNYGL 333
            P+V F     P    RTKKIFVGGL+   T  D K YF+QFG + D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A PKE +SP G +R +     YG+
Sbjct:   92 PKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 207

HSP 2 Score: 77.0258 bits (188), Expect = 1.799e-13
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 291
            K+F+GGL+   T+   ++YF QFG + + +VM D  T+R RGFGF+T+  +  VDKVL ++ HEL+ K ++ K A P+   P
Sbjct:   21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: MSI1H_MOUSE (RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.770e-22
Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 1 
Query:    1 PRVRFTGHLPP---ARTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE-LSP-GPSRNQLGTHNYGL 333
            P+V F     P    RTKKIFVGGL+   T  D K YF+QFG + D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A PKE +SP G +R +     YG+
Sbjct:   92 PKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM 207

HSP 2 Score: 77.0258 bits (188), Expect = 1.799e-13
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 291
            K+F+GGL+   T+   ++YF QFG + + +VM D  T+R RGFGF+T+  +  VDKVL ++ HEL+ K ++ K A P+   P
Sbjct:   21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.724e-22
Identity = 51/123 (41.46%), Postives = 80/123 (65.04%), Query Frame = 1 
Query:   34 ARTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLGTHNYGLSRVSSFLNGYTQSYNPSSVGGYG 402
            +++ KIFVGG+     E++ ++YF +FG++T+VV++YD   QRPRGFGFIT++ E++VD+ +   FH++ GK VEVKRA P++ S   +  Q G   +G   V +  NG+     P+   GYG
Sbjct:  110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD-SKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYG 231

HSP 2 Score: 69.3218 bits (168), Expect = 3.752e-11
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLG 315
            K+FVGGL  + T+   + YF Q+G + D V+M D  T + RGFGF+ +     V  VL    H L+G+ ++ K   P+ + P  +R + G
Sbjct:   11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 6.170e-22
Identity = 51/123 (41.46%), Postives = 79/123 (64.23%), Query Frame = 1 
Query:   34 ARTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLGTHNYGLSRVSSFLNGYTQSYNPSSVGGYG 402
            +++ KIFVGG+     E++ ++YF +FG++T+VV++YD   QRPRGFGFIT++ E++VD+ +   FH++ GK VEVKRA P++ S   +  Q G   +G     S  NG+     P+   GYG
Sbjct:  110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD-SKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYG 231

HSP 2 Score: 69.3218 bits (168), Expect = 3.752e-11
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLG 315
            K+FVGGL  + T+   + YF Q+G + D V+M D  T + RGFGF+ +     V  VL    H L+G+ ++ K   P+ + P  +R + G
Sbjct:   11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 8.058e-22
Identity = 53/98 (54.08%), Postives = 65/98 (66.33%), Query Frame = 1 
Query:    1 PRVRFTGHLPP---ARTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL 285
            P+V F     P    RTKKIFVGGL+   T  D K YF+QFG I D ++M+D  T R RGFGF+T+ SE+ VDKV    FHE+N KMVE K+A PKE+
Sbjct:  101 PKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEV 198

HSP 2 Score: 76.2554 bits (186), Expect = 3.069e-13
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 291
            K+F+GGL+   +    + YF ++G I++ +VM D  T+R RGFGF+T+    +VDKVL +  HEL+GK V+ K A P+   P
Sbjct:   30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHP 111
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.374e-21
Identity = 61/158 (38.61%), Postives = 84/158 (53.16%), Query Frame = 1 
Query:    1 PRVRFTGHLPP---ARTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL--SPGPSRNQLGTH--------NYGLSRVSSFLNGYTQSYNPSSVGGYGLKIDGRYGCSY 435
            P+V F     P    RTKKIFVGGL+      D K+YF+QFG + D ++M+D  T R RGFGF+T+++E+ V+KV    FHE+N KMVE K+A PKE+   PG      G            G+    +F+  Y + Y P     YG +  G    +Y
Sbjct:   93 PKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPGFPAAAY 249

HSP 2 Score: 72.7886 bits (177), Expect = 3.393e-12
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 291
            K+F+GGL+   +    + YF +FG I + +VM D  T+R RGFGF+T+    +VDKVL +  HEL+ K ++ K A P+   P
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.374e-21
Identity = 61/158 (38.61%), Postives = 84/158 (53.16%), Query Frame = 1 
Query:    1 PRVRFTGHLPP---ARTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL--SPGPSRNQLGTH--------NYGLSRVSSFLNGYTQSYNPSSVGGYGLKIDGRYGCSY 435
            P+V F     P    RTKKIFVGGL+      D K+YF+QFG + D ++M+D  T R RGFGF+T+++E+ V+KV    FHE+N KMVE K+A PKE+   PG      G            G+    +F+  Y + Y P     YG +  G    +Y
Sbjct:   93 PKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPGFPAAAY 249

HSP 2 Score: 72.7886 bits (177), Expect = 3.393e-12
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 291
            K+F+GGL+   +    + YF +FG I + +VM D  T+R RGFGF+T+    +VDKVL +  HEL+ K ++ K A P+   P
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103
[Close]
BLAST of EY675235 vs. ExPASy Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.139e-18
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 1 
Query:   37 RTKKIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPK-ELSPGPSRNQLGTHNYGLSRVSSFLNGY 363
            +T K+FVGG+    TE +F+ +F+QFG + D  +M D +T RPRGFGF+TY++E AV+  + + +  ++GK VEVKRA PK  L     R+Q G H       +  +N Y
Sbjct:  245 KTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPKASLRDSHDRHQHGYHGNANPYYAQNMNMY 354

HSP 2 Score: 76.6406 bits (187), Expect = 2.350e-13
Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 1 
Query:   46 KIFVGGLAPTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE 282
            K+F+GGL    T+   + YF+QFG + D  VM D  T R RGFGF+T+ + + V++V+ K  H L+GK+++ KRA+P+E
Sbjct:  164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKE-HHLDGKIIDPKRAIPRE 241
The following BLAST results are available for this feature:
BLAST of EY675235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
DAZP1_XENLA5.047e-2441.84DAZ-associated protein 1 OS=Xenopus laevis GN=daza... [more]
MSI1H_HUMAN1.624e-2249.14RNA-binding protein Musashi homolog 1 OS=Homo sapi... [more]
MSI1H_RAT2.770e-2249.14RNA-binding protein Musashi homolog 1 OS=Rattus no... [more]
MSI1H_MOUSE2.770e-2249.14RNA-binding protein Musashi homolog 1 OS=Mus muscu... [more]
DAZP1_HUMAN4.724e-2241.46DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1... [more]
DAZP1_MOUSE6.170e-2241.46DAZ-associated protein 1 OS=Mus musculus GN=Dazap1... [more]
MSIR6_DROME8.058e-2254.08RNA-binding protein Musashi homolog Rbp6 OS=Drosop... [more]
MSI2H_MOUSE1.374e-2138.61RNA-binding protein Musashi homolog 2 OS=Mus muscu... [more]
MSI2H_HUMAN1.374e-2138.61RNA-binding protein Musashi homolog 2 OS=Homo sapi... [more]
YHKF_SCHPO4.139e-1841.82Uncharacterized RNA-binding protein C660.15 OS=Sch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-A01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675235 ID=EY675235; Name=EY675235; organism=Citrus sinensis; type=EST; length=969bp
CCACGCGTCCGATTCACGGGTCACCTCCCTCCTGCCCGCACAAAGAAGAT
ATTTGTAGGAGGTTTAGCCCCTACAGTCACAGAGAGTGACTTTAAGAAGT
ACTTTGATCAGTTTGGGATTATCACAGATGTTGTGGTGATGTATGACCAC
AACACTCAAAGGCCTCGAGGTTTTGGATTCATTACTTATGATTCAGAGGA
AGCAGTGGATAAAGTGTTGCTCAAAACCTTTCACGAACTCAATGGTAAAA
TGGTTGAGGTCAAACGGGCTGTCCCCAAAGAATTATCTCCTGGGCCAAGC
CGGAACCAGTTAGGCACACATAATTATGGTCTGAGTAGAGTCAGTAGCTT
CCTTAATGGTTACACTCAGAGTTATAATCCAAGTTCTGTTGGTGGATATG
GACTTAAAATTGATGGTAGATATGGGTGCAGTTACCTTTGGGCGTAATGG
ATTCCCTACAATTGGTCCTGGTTATGGGATGGGAACTCAACTTTGAGCCC
AATTTTGAGCCCCAAGTCATGGAAGGAGGTGCAAACCTTAGTCCTATCCT
CACCTATGGTCGGGGACCGAACCCTTTATTTTGGGGGGAAATTCAAACAG
GTATAACCCACCCCCAGTTAACTTTGGTGCTGGGGAAACGGAAGAAATAA
ATTCCGTCCCTGAATTCCCCAAACCAGGAATTTGGTGGGGAAAGTGTGAA
TCTTAAATTATGACATTAAAACCTTGGAAATTTCTAAGCGTTTTTTTTGG
GGCCCTGGAAAGTTGGGACTTTGCCGAGACGGGGGTTCTCCTTGGGGGAC
CCTTCGGGAACAGTTGGGGGAATACCCCCCCTCATAAGTTCTAGTAGCCA
AGAGGAGGGGTTGGGAGGGCGGTGAGAGTACTAAATGAGCAGGAGAACAT
CTGAATGAACTGGAGTACAGAGAAGACATCACTCGTACTGATACGAGCGG
GGTAAGGGGAACCCGGCTG
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