EY675108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 315.849 bits (808), Expect = 1.845e-90 Identity = 149/169 (88.17%), Postives = 159/169 (94.08%), Query Frame = 3 Query: 39 MATSAIPQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 545 MATS I QSAFAGQT L+ NE VRKVG +GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNGVKFGEAVWFKAG+QIF EGGLDYLGNPNL+HAQSILAIWACQVVLMG Sbjct: 1 MATSTIQQSAFAGQTLLKPQNELVRKVG-GNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMG 168 HSP 2 Score: 39.2762 bits (90), Expect = 1.845e-90 Identity = 17/20 (85.00%), Postives = 17/20 (85.00%), Query Frame = 2 Query: 569 GGGPLGERLDPLYPGGAF*P 628 GGGPLGE LD LYPGGAF P Sbjct: 176 GGGPLGEGLDQLYPGGAFDP 195
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 328.176 bits (840), Expect = 4.481e-89 Identity = 174/241 (72.20%), Postives = 187/241 (77.59%), Query Frame = 3 Query: 39 MATSAIPQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFC*RIQNLVAVLLVKDLTHFTRVGLFNHLGLAG*PRSILLN*KARDPKKGPSGLCSPGLGFFFSGYLALGKG 761 MATSAI QSAFAGQTAL+QSNE V K+G GGR++MRRTVKSAP SIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF + L + L G F+ LGLA P K ++ K G + S GFF + GKG Sbjct: 1 MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV-EGYRVGGGPLGEGLDPIYPGGAFDPLGLADDP-DAFAELKVKEIKNGRLAMFSM-FGFFVQA-IVTGKG 237
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.442e-87 Identity = 173/241 (71.78%), Postives = 185/241 (76.76%), Query Frame = 3 Query: 39 MATSAIPQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFC*RIQNLVAVLLVKDLTHFTRVGLFNHLGLAG*PRSILLN*KARDPKKGPSGLCSPGLGFFFSGYLALGKG 761 MATSAI QSAFAGQTAL+ NE VRK+G GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGF + L + L G F+ LGLA P + K ++ K G + S GFF + GKG Sbjct: 1 MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFV-EGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEA-FAELKVKEIKNGRLAMFSM-FGFFVQA-IVTGKG 237
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.442e-87 Identity = 172/241 (71.37%), Postives = 186/241 (77.18%), Query Frame = 3 Query: 39 MATSAIPQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFC*RIQNLVAVLLVKDLTHFTRVGLFNHLGLAG*PRSILLN*KARDPKKGPSGLCSPGLGFFFSGYLALGKG 761 MATSAI QSAFAGQTAL+ NE VRK+G +GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILA+WA QVVLMG + L + L G F+ LGLA P + K ++ K G + S GFF + GKG Sbjct: 1 MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLI-EGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEA-FAELKVKEIKNGRLAMFSM-FGFFVQA-IVTGKG 237
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 2.082e-86 Identity = 170/241 (70.54%), Postives = 183/241 (75.93%), Query Frame = 3 Query: 39 MATSAIPQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFC*RIQNLVAVLLVKDLTHFTRVGLFNHLGLAG*PRSILLN*KARDPKKGPSGLCSPGLGFFFSGYLALGKG 761 MAT AI QSAF GQ + NEF+RKVG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGF + L + L G F+ LGLA P + K ++ K G + S GFF + GKG Sbjct: 1 MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFV-EGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEA-FAELKVKEIKNGRLAMFSM-FGFFVQA-IVTGKG 237
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 6.696e-85 Identity = 168/241 (69.71%), Postives = 182/241 (75.52%), Query Frame = 3 Query: 39 MATSAIPQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFC*RIQNLVAVLLVKDLTHFTRVGLFNHLGLAG*PRSILLN*KARDPKKGPSGLCSPGLGFFFSGYLALGKG 761 MATSAI QSAF G+T LRQ NEF+RK G R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+L KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLIHAQSILAIWA QVVLMGF + L + L G F+ LGLA P S K ++ K G + S GFF + GKG Sbjct: 1 MATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFV-EGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDS-FAELKVKELKNGRLAMFSM-FGFFVQA-IVTGKG 237
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.142e-84 Identity = 168/241 (69.71%), Postives = 186/241 (77.18%), Query Frame = 3 Query: 39 MATSAIPQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFC*RIQNLVAVLLVKDLTHFTRVGLFNHLGLAG*PRSILLN*KARDPKKGPSGLCSPGLGFFFSGYLALGKG 761 MA SAI SAFAGQTAL+Q +E VRKVGV+DG R +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+FPE+LSKNGV+FGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMG + L + L G F+ LGLA P + K ++ K G + S GFF + GKG Sbjct: 1 MAASAIQSSAFAGQTALKQRDELVRKVGVSDG-RFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLI-EGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEA-FAELKVKEIKNGRLAMFSM-FGFFVQA-IVTGKG 236
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 3.439e-81 Identity = 168/241 (69.71%), Postives = 183/241 (75.93%), Query Frame = 3 Query: 39 MATSAIPQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFC*RIQNLVAVLLVKDLTHFTRVGLFNHLGLAG*PRSILLN*KARDPKKGPSGLCSPGLGFFFSGYLALGKG 761 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGF + L + L G F+ LGLA P K ++ K G + S GFF + GKG Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFV-EGYRVGGGPLGEGLDKVYPGGAFDPLGLADDP-DTFAELKVKELKNGRLAMFSM-FGFFVQA-IVTGKG 235
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 3.439e-81 Identity = 168/241 (69.71%), Postives = 183/241 (75.93%), Query Frame = 3 Query: 39 MATSAIPQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFC*RIQNLVAVLLVKDLTHFTRVGLFNHLGLAG*PRSILLN*KARDPKKGPSGLCSPGLGFFFSGYLALGKG 761 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGF + L + L G F+ LGLA P K ++ K G + S GFF + GKG Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFV-EGYRVGGGPLGEGLDKVYPGGAFDPLGLADDP-DTFAELKVKELKNGRLAMFSM-FGFFVQA-IVTGKG 235
BLAST of EY675108 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 7.661e-81 Identity = 166/243 (68.31%), Postives = 182/243 (74.90%), Query Frame = 3 Query: 39 MAT-SAIPQSAFAGQTALR-QSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFC*RIQNLVAVLLVKDLTHFTRVGLFNHLGLAG*PRSILLN*KARDPKKGPSGLCSPGLGFFFSGYLALGKG 761 MAT SAI S+ AGQT LR Q NE V+KVG A RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNG+KFGEAVWFKAGAQIFSEGGLDY GNPNLIHAQSILAIWACQVVLMG + L + L G F+ LGLA P + K ++ K G + S GFF + GKG Sbjct: 1 MATASAIQSSSLAGQTLLRPQQNELVKKVGTAQA-RITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLI-EGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEA-CAELKVKEIKNGRLAMFSM-FGFFVQA-IVTGKG 238 The following BLAST results are available for this feature:
BLAST of EY675108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675108 ID=EY675108; Name=EY675108; organism=Citrus sinensis; type=EST; length=971bpback to top |