EY675040

Overview
NameEY675040
Unique NameEY675040
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7945 contig Csv1_Contig7945:461..1033. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS2_ORYSJ (Sucrose synthase 2 OS=Oryza sativa subsp. japonica GN=SUS2 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12
Identity = 28/60 (46.67%), Postives = 44/60 (73.33%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKV 180
            QRIYE YTWK+Y+ +++ +  +YGFW+ ++   +   +RYI+MFY+L +R LAS VP+ V
Sbjct:  742 QRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAV 801          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12
Identity = 27/60 (45.00%), Postives = 44/60 (73.33%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKV 180
            +RIYE YTWKIY+ ++L +  +YGFW+ ++   +   +RY++MFY+L +R LA +VP+ V
Sbjct:  746 KRIYEKYTWKIYSERLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAV 805          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12
Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPI 174
            QRIYE YTWKIY+ +++ +  +Y FW+ ++K  +   +RY++MFY L FR LA++VPI
Sbjct:  749 QRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPI 806          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12
Identity = 27/58 (46.55%), Postives = 43/58 (74.14%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPI 174
            QRIYE YTWK+Y+ +++ +  +YGFW+ ++   +   +RYI+MFY+L +R LAS VP+
Sbjct:  742 QRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPL 799          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS1_TULGE (Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12
Identity = 25/60 (41.67%), Postives = 44/60 (73.33%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKV 180
            QRIYE YTWK+Y+ +++ +  +YGFW+ ++   +   +RY++MFY+L +R LA +VP+ +
Sbjct:  744 QRIYEKYTWKLYSERLMTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAI 803          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12
Identity = 27/62 (43.55%), Postives = 44/62 (70.97%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKVPE 186
            +RIYE YTWK Y+ ++L +  +Y FW+ ++K  +   +RY++MFYSL FR LA+++P+   E
Sbjct:  743 KRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATDE 804          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.760e-12
Identity = 28/62 (45.16%), Postives = 45/62 (72.58%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKVPE 186
            QRI E YTW+IY+ ++L +  +YGFW+ ++   +   +RY++MFY+L +RKLA +VP+ V E
Sbjct:  745 QRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.144e-11
Identity = 27/60 (45.00%), Postives = 44/60 (73.33%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKV 180
            QRI E YTW+IY+ ++L +  +YGFW+ ++   +   +RY++MFY+L +RKLA +VP+ V
Sbjct:  745 QRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAV 804          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 28/60 (46.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKV 180
            +RI E YTW+IY++++L + ++YGFW+ ++K  +   +RY++MFY+L FRKLA  VP+ V
Sbjct:  745 KRIQEKYTWQIYSDRLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAV 804          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11
Identity = 26/58 (44.83%), Postives = 43/58 (74.14%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPI 174
            QRI E YTW+IY+ ++L +  +YGFW+ ++   +   +RY++MFY+L +RKLA +VP+
Sbjct:  745 QRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPL 802          
The following BLAST results are available for this feature:
BLAST of EY675040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SUS2_ORYSJ3.011e-1246.67Sucrose synthase 2 OS=Oryza sativa subsp. japonica... [more]
SUS2_TULGE3.932e-1245.00Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS2_PEA3.932e-1248.28Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUS1_MAIZE3.932e-1246.55Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1[more]
SUS1_TULGE5.136e-1241.67Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS2_ARATH6.707e-1243.55Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUSY_VICFA8.760e-1245.16Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_PHAAU1.144e-1145.00Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUS2_SOLTU1.494e-1146.67Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]
SUSY_SOYBN2.549e-1144.83Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675040 ID=EY675040; Name=EY675040; organism=Citrus sinensis; type=EST; length=574bp
CAACGTATATATGAATGCTATACATGGAAGATTTATGCAAACAAAGTGCT
GAACATGGGATCCATTTATGGATTTTGGAGGCAGATAAACAAAGAACCAA
AGGAAGCTAAGCAAAGATACATCCAGATGTTCTATAGTCTCCTGTTCAGG
AAACTAGCAAGTAATGTACCCATCAAAGTTCCTGAACCTCTACAATCAGC
ACAAACTTCACCAGTTGAATCCCAGCAACCTGCAGCAGCAACAGGGATAG
CTAAACCCCAGCCACCAGCATCAGCAGTGATAGATAAACCTAACCAACAA
GAAAAGACCGCTCAGCAAAAGAAAAGGGAAGAAGGTTCAGAGCTGAAGCC
GCCTAGCTCTCAGCAAATAAGGAATCCTGTACGTGACCTTTGGACCCAGT
GGGGCATCACCATTGGCTTTCTCTTCATCATCTATTACCTTCTCAAGAGA
TTGTATTGCATGTTTATGTAAATGTATCATCAAGACAGTGACACATATGC
CGTTATTTGTAAGCAATTTGTTCACAATAATAAGAAAAATCCCAGCCTTC
TATCTGAAAAAAAAAAAAAAAAAG
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