EY675033

Overview
NameEY675033
Unique NameEY675033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1019
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB2_ARATH (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana GN=YAB2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.888e-17
Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 3
Query:  276 MSLDLSSERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHCANLAKCKHGICTSSISSS------RPLKNNT*NLENSITKDCGXXXXXXXXXXXQHLKMQKLKLPQMPPNSSPQKKKTNRFPSAIHKVYQGREKSKRIK 680
            MS+D SSERVCYVHC++C TIL VSVP +SLF +VTV+CGHC NL     G+     S+       +P + +T +L     KDC               +    + P+MPP   P+K++  R PSA ++    +E+ +RIK
Sbjct:    1 MSVDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTTSLVT--RKDCASSSRSTNNLSENIDR----EAPRMPPIRPPEKRQ--RVPSAYNRFI--KEEIQRIK 131          
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSJ (Protein YABBY 5 OS=Oryza sativa subsp. japonica GN=YAB5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.776e-12
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 3
Query:  297 ERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHCANL 410
            E++CYVHCN+C+TIL V VPCSSLF  VTV+CGHCANL
Sbjct:   29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANL 66          
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSI (Protein YABBY 5 OS=Oryza sativa subsp. indica GN=YAB5 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.776e-12
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 3
Query:  297 ERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHCANL 410
            E++CYVHCN+C+TIL V VPCSSLF  VTV+CGHCANL
Sbjct:   29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANL 66          
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB6_ORYSJ (Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.183e-12
Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = 3
Query:  294 SERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHCANL 410
            +E+VCYVHCN+CNTIL VSVP +S+ NIVTV+CGHC NL
Sbjct:    8 AEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNL 46          
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB5_ARATH (Axial regulator YABBY 5 OS=Arabidopsis thaliana GN=YAB5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.183e-12
Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 3
Query:  288 LSSERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHCANLAKCKHGICTSSIS 449
            +++E++CY+ CN+CN IL V+VPCSSLF+IVTV+CGHC NL          S+S
Sbjct:    6 MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLS 59          
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSJ (Protein YABBY 4 OS=Oryza sativa subsp. japonica GN=YAB4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.076e-12
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 3
Query:  294 SERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHCANL 410
            +E++CYVHCN C+TIL V VPCSSLF  VTV+CGHCANL
Sbjct:   22 TEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANL 60          
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSI (Protein YABBY 4 OS=Oryza sativa subsp. indica GN=YAB4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.076e-12
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 3
Query:  294 SERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHCANL 410
            +E++CYVHCN C+TIL V VPCSSLF  VTV+CGHCANL
Sbjct:   22 TEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANL 60          
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB3_ORYSJ (Protein YABBY 3 OS=Oryza sativa subsp. japonica GN=YAB3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.836e-11
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 3
Query:  285 DLSSERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHCANL 410
            D   E++CYVHC+YC+T+L VSVP SSLF  VTV+CGHC++L
Sbjct:   54 DSEQEQLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSL 95          
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.836e-11
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 3
Query:  297 ERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHCANL 410
            E VCYVHCN+CNTI  VSVP +S+ NIVTV+CGHC +L
Sbjct:   10 EHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSL 47          
BLAST of EY675033 vs. ExPASy Swiss-Prot
Match: YAB1_ORYSJ (Protein YABBY 1 OS=Oryza sativa subsp. japonica GN=YAB1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.836e-11
Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 3
Query:  276 MSLDLSSERVCYVHCNYCNTILTVSVPCSSLFNIVTVKCGHC 401
            MS+  +SE VCYV+CNYCNTIL V+VP +  +NIVTV+CGHC
Sbjct:    1 MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHC 42          
The following BLAST results are available for this feature:
BLAST of EY675033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
YAB2_ARATH4.888e-1739.01Putative axial regulator YABBY 2 OS=Arabidopsis th... [more]
YAB5_ORYSJ2.776e-1276.32Protein YABBY 5 OS=Oryza sativa subsp. japonica GN... [more]
YAB5_ORYSI2.776e-1276.32Protein YABBY 5 OS=Oryza sativa subsp. indica GN=Y... [more]
YAB6_ORYSJ6.183e-1274.36Protein YABBY 6 OS=Oryza sativa subsp. japonica GN... [more]
YAB5_ARATH6.183e-1253.70Axial regulator YABBY 5 OS=Arabidopsis thaliana GN... [more]
YAB4_ORYSJ8.076e-1274.36Protein YABBY 4 OS=Oryza sativa subsp. japonica GN... [more]
YAB4_ORYSI8.076e-1274.36Protein YABBY 4 OS=Oryza sativa subsp. indica GN=Y... [more]
YAB3_ORYSJ6.836e-1164.29Protein YABBY 3 OS=Oryza sativa subsp. japonica GN... [more]
YAB2_ORYSJ6.836e-1171.05Protein YABBY 2 OS=Oryza sativa subsp. japonica GN... [more]
YAB1_ORYSJ6.836e-1166.67Protein YABBY 1 OS=Oryza sativa subsp. japonica GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675033 ID=EY675033; Name=EY675033; organism=Citrus sinensis; type=EST; length=1019bp
AAAGAAACCCACTACTCTACATATACTCTCCCCTACACTTCACTCCCGAT
CAGACTTGTCCTTTCAGATTTTTTCCTTCTCTTTTTATCACCATTTTCTC
CCTCTCTCTCTCCAAATAATTATTATTTATACATGAAATCAAACCATTTT
GTTTTGTTTTCTTCTTCTTCTTCGTCTTTGTCTTTCTTTTAATTTGTTCA
AGATTTGATTGATTGATAATAGAACTCTTGCGTTTCTATTGTTTGTCGGT
ACACTTCTTGATCTCCACTGAAACTATGTCACTGGACTTGTCATCTGAAC
GTGTTTGTTATGTTCACTGCAACTACTGCAACACCATTTTAACGGTGAGT
GTTCCTTGCTCAAGTTTGTTCAACATTGTGACTGTAAAATGTGGGCATTG
CGCCAATTTGGCTAAATGTAAACATGGTATCTGCACTTCAAGCATTTCCT
CTTCAAGACCCCTCAAAAACAACACATAAAACCTAGAAAATTCCATTACT
AAGGATTGTGGATTCATCTTCAAAAAGGCAAAAAAATTTTTCTTCCAGCA
TTTAAAAATGCAGAAACTGAAACTCCCTCAAATGCCTCCTAATTCGTCCC
CCCAAAAAAAAAAAACAAACAGGTTTCCTTCTGCAATACATAAGGTTTAT
CAAGGGAGGGAAAAATCCAAAAGAATTAAGGGCCCGTAACCCCTAAAAGT
CCACCCAAAAAAAAAAATTTTTTAAGACAAAACCACCAAAAAAATTAGGG
GGGCACTTTTTCTCCCCCAGTTACCATTTTTGAAATTAAAAAGGTGGGGA
GGGGGCCACTAGGAAAAACAAAAACTAAAACAATAGGGGACGGACCCAAA
CACGAAAAAAGAGAGCGATCGGAAAGAGTGCCAAGAGGGTGGATCTCAAT
ATTAAAAAACACAACCTCACAATAAAAAAGAAAAGAAAAAGTAAGANGAC
AAGTGGTAATAAGAATAACCGGATGGGCGCGACCGGTGATAGAAGTAAAA
AAAAAAAAAGATACTTAAA
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