EY743378

Overview
NameEY743378
Unique NameEY743378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY743378 vs. ExPASy Swiss-Prot
Match: YGI3_SCHPO (Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe GN=SPBC2A9.03 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.465e-17
Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 1 
Query:   13 PGSTHASAGDQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKCQEIDLFGEIAGISFSPYTESLFVGVADRTYGSLLEFNR 336
            P     + G QDTT ++WDIR L +S   L   M A+  L F+  G  LA+ E ADFV +FDT+  +   Q ID FGEIAG ++S   +SLF+GV D   G +LEF R
Sbjct:  310 PNGNILATGGQDTTAKVWDIRALGKSFRNLGSQMSAVTNLCFSPLGESLAVTEQADFVQLFDTKL-FNTSQVIDFFGEIAGTAYSSSGDSLFIGVDDPMLGGILEFRR 416
The following BLAST results are available for this feature:
BLAST of EY743378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YGI3_SCHPO4.465e-1745.37Uncharacterized WD repeat-containing protein C2A9.... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-093-G02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY743378 ID=EY743378; Name=EY743378; organism=Citrus sinensis; type=EST; length=956bp
CCGGGGAATTCCCCGGGGTCGACCCACGCGTCCGCTGGGGACCAAGACAC
TACTTGCAGGCTGTGGGACATAAGGAACTTATCGCAGTCCCTGACTGTGT
TGAAGGGAAATATGGGGGCCATTAGGGCTCTCAAGTTCACCTCCGACGGC
CGGTTTCTGGCAATGGCTGAGCCAGCAGACTTTGTTCATGTATTTGATAC
AGAGTCTGGATATGTCAAGTGCCAGGAGATTGATCTATTTGGGGAGATTG
CCGGAATATCCTTTAGCCCATACACAGAATCTCTATTTGTTGGCGTTGCT
GATCGCACCTACGGAAGCTTATTGGAGTTCAACAGGAGGCATTACAACCA
ATATTTGGACTCCATATTCTAATAGGATGAGGCTTAAGACCTGGGAAATA
TGTATATGCAGTAGAACTTTTTGTTTTTTAAAAGTGTGAGGTTTTTTAGA
AATTTGGGGGTTTGCCTTATTTCCTCCCCAGTGTATAATAGAAAAGCAGG
GTGCAATTACATCAAAGGTCTTGGCTTTAGGAAATTTATTTTCTGGTGAA
GGTGATTTTTTTTAGCTGGCGGGAAATGGAGTGTGATAAATGTTGCCCCC
GGCGAAAATCATGGCAAACGCCTGTAAAATCTATAAAATGGGCATGGGTT
TAATTCCTTTAACAAACCAAAATGAAATTTTTTTTTTCAATTCTAAAAAC
TTTTCCCCCTTATTTCCTATATTTTGGCTGAACAATTCCTCCCCCCATAA
TTATAAATCAAACAAGAAAAAATATTTTTTTATCCAAAAGAAAAAAAAAA
AAAAAAAATAAAATAGGGGCGTGCCTTCTCTTATAGGGAAACCAGGCTTA
ACTTACACTCGCCGACGGGCGAAGACTTAAACCATTCTTTCATTGAGGGG
CTCCAACATATACATACAAATACACAAAGGAGCCCCGCGAAGTGTAATAA
CCACGA
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