EY674986

Overview
NameEY674986
Unique NameEY674986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1001
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 1.839e-101
Identity = 189/257 (73.54%), Postives = 211/257 (82.10%), Query Frame = 2
Query:    2 LLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKMGGNGLQI*LWQEKNQTHL*RIPPQITKMPTLEKNFFIYCFPQRGFWPN 772
            LLEKE SGCRALLR+DKV+DLSRMYRLYHKI +GLEPVAN+FKQH+TAEG  LVQQAED ATNQ  ++ +VQEQVLIRK+IELHDKYM YVT CF NHTLFHKALKEAFEIFCNK V GSSS+ELLATFCDNILKKGG+EKLSDEAIE+TLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDR+ANDDHE+SILTKLKQQCG QFTSKM G    + L +E   +    +       P ++    +      GFWP+
Sbjct:  263 LLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLGSNPAANPGIDLTVTVL---TTGFWPS 516          
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.942e-30
Identity = 87/252 (34.52%), Postives = 136/252 (53.97%), Query Frame = 2
Query:   35 LLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKMGGNGLQI*LWQEKNQTHL*RIPPQITKMPTLEKNFFIYCFPQRGFWP 769
            LL  DK EDL RMY L  +I  GL  +  + + HI  +G   +++  +AA N          ++ ++ ++++H KY   V + F N   F  AL +A   F N       A   S S ELLA +CD++LKK  + K  +EA +E+TL +V+ +  YI DKD+F +FY K LA+RL+   +A+DD E S+++KLKQ CG ++TSK+      I + ++ N+    +    +T    L+ +F I      G WP
Sbjct:  310 LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNE----QFKKHLTNSEPLDLDFSIQVL-SSGSWP 546          
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL1_MOUSE (Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.942e-30
Identity = 87/252 (34.52%), Postives = 136/252 (53.97%), Query Frame = 2
Query:   35 LLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKMGGNGLQI*LWQEKNQTHL*RIPPQITKMPTLEKNFFIYCFPQRGFWP 769
            LL  DK EDL RMY L  +I  GL  +  + + HI  +G   +++  +AA N          ++ ++ ++++H KY   V + F N   F  AL +A   F N       A   S S ELLA +CD++LKK  + K  +EA +E+TL +V+ +  YI DKD+F +FY K LA+RL+   +A+DD E S+++KLKQ CG ++TSK+      I + ++ N+    +    +T    L+ +F I      G WP
Sbjct:  310 LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNE----QFKKHLTNSEPLDLDFSIQVL-SSGSWP 546          
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL1_HUMAN (Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.942e-30
Identity = 87/252 (34.52%), Postives = 136/252 (53.97%), Query Frame = 2
Query:   35 LLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKMGGNGLQI*LWQEKNQTHL*RIPPQITKMPTLEKNFFIYCFPQRGFWP 769
            LL  DK EDL RMY L  +I  GL  +  + + HI  +G   +++  +AA N          ++ ++ ++++H KY   V + F N   F  AL +A   F N       A   S S ELLA +CD++LKK  + K  +EA +E+TL +V+ +  YI DKD+F +FY K LA+RL+   +A+DD E S+++KLKQ CG ++TSK+      I + ++ N+    +    +T    L+ +F I      G WP
Sbjct:  310 LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNE----QFKKHLTNSEPLDLDFSIQVL-SSGSWP 546          
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 8.430e-30
Identity = 70/206 (33.98%), Postives = 127/206 (61.65%), Query Frame = 2
Query:   17 QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKMGG 634
            Q G   LL E++++DLS +Y+L+ ++  G++ +   + ++I A G+ +V   E             +++ +++++++  DK    +  CF+ +  F  A+KEAFE F NK    +  +EL+A + D+ L+  GN++ +DE +E+ L+K++ +  +I  KD+F  FY+K LA+RLL  ++A+ D EKS+L+KLK +CG  FTSK+ G
Sbjct:  440 QKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEG 629          
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.101e-29
Identity = 72/211 (34.12%), Postives = 123/211 (58.29%), Query Frame = 2
Query:    2 LLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKMGG 634
            L++ E SG  ++L++DK+EDL RMY L+ ++  GL  + +V   ++   G  +V   E   T + G+          + +++L DKY   + N   N   F  ++++AFE F N       S E ++ F D  LKKG  + +S+E ++  L+K++ L   I +KD+F ++Y++ LA+RLL  R+ +DD E++++ KLK +CG QFTSK+ G
Sbjct:  271 LIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLNLMKDVISSYVKEIGRGIVMDEEK--TKESGT--------YFQSLLDLKDKYDNLLQNALYNDKQFIHSIQQAFEYFINL---NPKSPEYISLFIDEKLKKG-LKGVSEEEVDIILDKILMLFRLIQEKDVFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEG 467          
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL1_DICDI (Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.203e-29
Identity = 77/206 (37.38%), Postives = 117/206 (56.80%), Query Frame = 2
Query:   29 RALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKM 628
            + LL +DK+ DL+RMY L  +IP+GLEP+    ++H+   G   +Q     ATN     G ++ +V I  ++++  KY E VT  F + T F  +L +A   F N+      A   S S ELLA F D +LKK  N     E +E+ L  V+ +  YI DKD+F +FY K LA+RL+   + ++D E +++ KLK  CG ++TSK+
Sbjct:  299 QTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEKHVQNVG---LQAVSSIATN-----GVIEPKVYIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRRFINENAVTIAAKSSSKSPELLARFTDFLLKKSPNNPEESE-MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYTSKL 495          
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 4.626e-28
Identity = 71/206 (34.47%), Postives = 121/206 (58.74%), Query Frame = 2
Query:   17 QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKMGG 634
            Q G   LL E++V DL++MY+L+ ++  G + +   + ++I   GT +V   E             +++ +++ +++  DK    +  CF  +  F   +KE+FE F NK    +  +EL+A   D+ L+  GN++ +DE +E TL+K++ L  +I  KD+F  FY+K LA+RLL  ++A+ D EKS+L+KLK +CG  FTSK+ G
Sbjct:  304 QKGLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSEYIKTFGTAIVINPE-------------KDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFINKRP--NKPAELIAKHVDSKLR-AGNKEATDEELERTLDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEG 493          
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.626e-28
Identity = 70/211 (33.18%), Postives = 122/211 (57.82%), Query Frame = 2
Query:    2 LLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKMGG 634
            ++E E SG   +L+  K EDL+ MY+L+ ++P GL+ +      ++  +G  LV +       +G     V     I+ +++L  ++  ++   F N  LF + +   FE F N     S S E L+ F D+ LKKG  + L+++ +E  L+K + L  ++ +KD+F  +Y++ LARRLL +++ +DD EK++++KLK +CG QFTSK+ G
Sbjct:  276 IVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEG 472          
BLAST of EY674986 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.626e-28
Identity = 70/211 (33.18%), Postives = 122/211 (57.82%), Query Frame = 2
Query:    2 LLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRNANDDHEKSILTKLKQQCGEQFTSKMGG 634
            ++E E SG   +L+  K EDL+ MY+L+ ++P GL+ +      ++  +G  LV +       +G     V     I+ +++L  ++  ++   F N  LF + +   FE F N     S S E L+ F D+ LKKG  + L+++ +E  L+K + L  ++ +KD+F  +Y++ LARRLL +++ +DD EK++++KLK +CG QFTSK+ G
Sbjct:  276 IVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEG 472          
The following BLAST results are available for this feature:
BLAST of EY674986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
CUL1_ARATH1.839e-10173.54Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1[more]
CUL1_PONAB4.942e-3034.52Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1[more]
CUL1_MOUSE4.942e-3034.52Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1[more]
CUL1_HUMAN4.942e-3034.52Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2[more]
CUL4B_HUMAN8.430e-3033.98Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3[more]
CUL3_DICDI1.101e-2934.12Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 ... [more]
CUL1_DICDI3.203e-2937.38Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 ... [more]
CUL4A_HUMAN4.626e-2834.47Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3[more]
CUL3_XENTR4.626e-2833.18Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1[more]
CUL3B_XENLA4.626e-2833.18Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-D06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674986 ID=EY674986; Name=EY674986; organism=Citrus sinensis; type=EST; length=1001bp
GCTTCTTGAGAAGGAGCAGTCTGGATGCCGAGCATTGCTTAGAGAAGATA
AGGTGGAGGATCTTTCTAGGATGTATAGGCTTTATCATAAAATACCTAAA
GGCTTGGAGCCAGTGGCTAATGTATTCAAACAGCATATTACTGCCGAAGG
TACTGTGTTGGTACAACAGGCTGAAGATGCTGCAACAAACCAGGGTGGAA
GTTCAGGTGCTGTGCAGGAACAGGTCCTTATCAGAAAAATAATTGAGCTG
CATGACAAGTATATGGAATACGTGACTAATTGTTTCATAAACCACACGTT
GTTCCACAAGGCTCTGAAAGAGGCTTTTGAGATATTTTGCAATAAAGCTG
TTGGTGGCAGTTCGAGTTCAGAACTGCTGGCAACTTTTTGTGATAATATC
CTAAAGAAGGGTGGAAATGAGAAACTGAGTGATGAAGCCATTGAAGAAAC
TCTGGAGAAGGTTGTTAAGCTGCTTGCATATATCAGTGATAAAGATCTTT
TTGCCGAATTCTACAGGAAGAAGCTTGCTCGTCGGCTGCTTTTTGATCGT
AATGCTAATGATGATCATGAAAAGAGTATTCTCACAAAGCTGAAACAGCA
ATGTGGTGAACAGTTTACATCGAAGATGGGAGGGAATGGGTTACAAATTT
GACTTTGGCAAGAAAAAAATCAAACCCACCTTTAAAGAATACCTCCCCAA
ATAACCAAAATGCCCACCCTGGAAAAAAATTTTTTCATTTACTGTTTCCC
CCAAAGGGGTTTTTGGCCCAATTTATAAAATCCCCCCATTTTTAAACCCT
TCCTTTCGGAAAAAGGTTAAAAGGGGGTAAAAAATTTTTTAAGGGGGATT
TTTTTAAAAAACCCCAAAAAAAAAAAACCCAAAAAAAAACTTTTTACTTG
GGGTTTTTTTTTCCCTTTTGGGGGGTCCAAAAGGGACAAACAAAAAAAAA
GGGGGGGAAAAGTGTTTTTGAGAAAACAAACAAAAAAAAAAAATAATTTT
A
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