EY674978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MED31_ARATH (Mediator of RNA polymerase II transcription subunit 31 OS=Arabidopsis thaliana GN=At5g19910 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 3.044e-62 Identity = 107/121 (88.43%), Postives = 113/121 (93.39%), Query Frame = 3 Query: 15 GEEASDAPSSPKKVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRTK 377 G++AS+ PS PK YKDPD GRQRFLLELEF+QCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQN NFR AMAHPANKELAHRQQF++WKNYRNNR K Sbjct: 8 GDDASEIPSPPKNTYKDPDGGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNPNFRTAMAHPANKELAHRQQFYYWKNYRNNRLK 128
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MED31_DICDI (Putative mediator of RNA polymerase II transcription subunit 31 OS=Dictyostelium discoideum GN=med31 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 8.637e-33 Identity = 58/96 (60.42%), Postives = 76/96 (79.17%), Query Frame = 3 Query: 84 RFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNR 371 RF++ELEF+QCL+NP Y++YLAQNRYF+D+AF+ YL YLQYW++PEY KFI+YP LYFL+LLQ FR + H + + H QQF+ W+ YRNNR Sbjct: 55 RFIMELEFIQCLSNPRYLNYLAQNRYFQDKAFVNYLVYLQYWKKPEYAKFIVYPQSLYFLDLLQEERFRQELNHSQSTDFIHEQQFYHWQYYRNNR 150
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MED31_DANRE (Mediator of RNA polymerase II transcription subunit 31 OS=Danio rerio GN=med31 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 5.422e-27 Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 3 Query: 54 VYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRTK 377 V + + RQRF LELEFVQCLANP Y+++LAQ Y ++ F+ YLKYL YW+ PEY KF+ YPHCL+ LELLQ +FR + + + QQ W++Y RT+ Sbjct: 4 VMETDEQARQRFQLELEFVQCLANPNYLNFLAQRGYLREKPFVNYLKYLLYWKEPEYAKFLKYPHCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRTR 111
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MED31_MOUSE (Mediator of RNA polymerase II transcription subunit 31 OS=Mus musculus GN=Med31 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 5.995e-26 Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 63 DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRTK 377 D R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y R + Sbjct: 10 DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRVR 114
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MED31_BOVIN (Mediator of RNA polymerase II transcription subunit 31 OS=Bos taurus GN=MED31 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.830e-26 Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 63 DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRTK 377 D R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y R + Sbjct: 10 DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 114
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MED31_HUMAN (Mediator of RNA polymerase II transcription subunit 31 OS=Homo sapiens GN=MED31 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.336e-25 Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 63 DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRTK 377 D R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y R + Sbjct: 10 DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKDPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 114
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MED31_XENTR (Mediator of RNA polymerase II transcription subunit 31 OS=Xenopus tropicalis GN=med31 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 6.628e-25 Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 78 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRTK 377 R RF LELEFVQCLANP Y+++LAQ YF+D++F+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y R + Sbjct: 12 RIRFQLELEFVQCLANPNYLNFLAQRGYFKDKSFVNYLKYLLYWKDPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 111
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MD31B_XENLA (Mediator of RNA polymerase II transcription subunit 31-B OS=Xenopus laevis GN=med31-B PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 6.628e-25 Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 78 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRTK 377 R RF LELEFVQCLANP Y+++LAQ YF+D++F+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y R + Sbjct: 13 RIRFQLELEFVQCLANPNYLNFLAQRGYFKDKSFVNYLKYLLYWKDPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 112
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MD31A_XENLA (Mediator of RNA polymerase II transcription subunit 31-A OS=Xenopus laevis GN=med31-A PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 8.657e-25 Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 78 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRTK 377 R RF LELEFVQCLANP Y+++LAQ YF+D+ F+ Y+KYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y R + Sbjct: 12 RIRFQLELEFVQCLANPNYLNFLAQRGYFKDKPFVNYMKYLLYWKEPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRVR 111
BLAST of EY674978 vs. ExPASy Swiss-Prot
Match: MED31_DROME (Mediator of RNA polymerase II transcription subunit 31 OS=Drosophila melanogaster GN=MED31 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.477e-24 Identity = 48/100 (48.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 78 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRTK 377 ++R+ +ELEFVQCL+NP Y+++LAQ +F+D++FI YLKYLQYW+ P+Y K++MYP CLYFL+LLQ +FR + + + Q W++Y R K Sbjct: 19 KRRWQIELEFVQCLSNPNYLNFLAQRGFFKDQSFINYLKYLQYWKEPDYAKYLMYPMCLYFLDLLQYEHFRREIVNSQCCKFIDDQAILQWQHYTRKRIK 118 The following BLAST results are available for this feature:
BLAST of EY674978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674978 ID=EY674978; Name=EY674978; organism=Citrus sinensis; type=EST; length=1046bpback to top |