EY674965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.254e-42 Identity = 87/150 (58.00%), Postives = 96/150 (64.00%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEPKPDPRSKXXXXXXXXXXXXXXXXKVQNCWRAAPEKRKNQCTPKDNFDPMG*AEDREVY 451 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADP+TFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P + + ++ P +FDP+G A D E + Sbjct: 58 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAF 207
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.225e-42 Identity = 79/92 (85.87%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADP+ FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P Sbjct: 67 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 158 HSP 2 Score: 22.3274 bits (46), Expect = 5.225e-42 Identity = 11/37 (29.73%), Postives = 16/37 (43.24%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRS 447 G +EG + G GE +P+Y GL P + Sbjct: 178 GAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEA 214 HSP 3 Score: 84.3445 bits (207), Expect = 1.165e-15 Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + GA IFSEG LDYLGNPSL+HAQSILAIWACQV+LMG YRIAGGPL Sbjct: 141 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPL 190
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.157e-41 Identity = 79/92 (85.87%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGP SGEPPSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149 HSP 2 Score: 21.557 bits (44), Expect = 1.157e-41 Identity = 11/37 (29.73%), Postives = 16/37 (43.24%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRS 447 G +EG + G GE +P+Y GL P + Sbjct: 169 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEA 205 HSP 3 Score: 83.9593 bits (206), Expect = 1.522e-15 Identity = 41/50 (82.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNPSLIHAQSILAIWACQVVLMG YRIAGGPL Sbjct: 132 KAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 181
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.157e-41 Identity = 79/92 (85.87%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGE PSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P Sbjct: 58 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149 HSP 2 Score: 22.3274 bits (46), Expect = 1.157e-41 Identity = 11/37 (29.73%), Postives = 16/37 (43.24%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRS 447 G +EG + G GE +P+Y GL P + Sbjct: 169 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 205 HSP 3 Score: 83.5741 bits (205), Expect = 1.988e-15 Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNPSL+HAQSILAIWACQVVLMG YRIAGGPL Sbjct: 132 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPL 181
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.157e-41 Identity = 78/92 (84.78%), Postives = 79/92 (85.87%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGP SGEPPSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKAG G LG P Sbjct: 59 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNP 150 HSP 2 Score: 25.0238 bits (53), Expect = 1.157e-41 Identity = 12/37 (32.43%), Postives = 18/37 (48.65%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRS 447 G +EG + G GE +P+Y GL RP++ Sbjct: 170 GAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQA 206 HSP 3 Score: 81.6481 bits (200), Expect = 7.553e-15 Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFS+G LDYLGNPSL+HAQS+LAIWACQVVLMG YRIAGGPL Sbjct: 133 KAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPL 182
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.507e-41 Identity = 79/92 (85.87%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGE PSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P Sbjct: 60 LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 151 HSP 2 Score: 21.9422 bits (45), Expect = 1.507e-41 Identity = 12/37 (32.43%), Postives = 16/37 (43.24%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRS 447 G IEG + G GE +P+Y GL P + Sbjct: 171 GAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEA 207 HSP 3 Score: 83.1889 bits (204), Expect = 2.596e-15 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNPSL+HAQSILAIWACQVVLMG YR+AGGPL Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPL 183
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.507e-41 Identity = 79/92 (85.87%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGE PSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P Sbjct: 60 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 151 HSP 2 Score: 21.9422 bits (45), Expect = 1.507e-41 Identity = 11/37 (29.73%), Postives = 16/37 (43.24%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRS 447 G +EG + G GE +P+Y GL P + Sbjct: 171 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 207 HSP 3 Score: 83.1889 bits (204), Expect = 2.596e-15 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNPSL+HAQSILAIWACQVVLMG YR+AGGPL Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPL 183
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.507e-41 Identity = 79/92 (85.87%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGE PSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P Sbjct: 60 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 151 HSP 2 Score: 21.9422 bits (45), Expect = 1.507e-41 Identity = 11/37 (29.73%), Postives = 16/37 (43.24%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRS 447 G +EG + G GE +P+Y GL P + Sbjct: 171 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 207 HSP 3 Score: 83.1889 bits (204), Expect = 2.596e-15 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNPSL+HAQSILAIWACQVVLMG YR+AGGPL Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPL 183
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.507e-41 Identity = 79/92 (85.87%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGE PSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P Sbjct: 58 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149 HSP 2 Score: 21.9422 bits (45), Expect = 1.507e-41 Identity = 11/37 (29.73%), Postives = 16/37 (43.24%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRS 447 G +EG + G GE +P+Y GL P + Sbjct: 169 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 205 HSP 3 Score: 82.8037 bits (203), Expect = 3.391e-15 Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNPSL+HAQSILAIWACQV+LMG YR+AGGPL Sbjct: 132 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 181
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.507e-41 Identity = 79/92 (85.87%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGE PSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P Sbjct: 59 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 150 HSP 2 Score: 21.9422 bits (45), Expect = 1.507e-41 Identity = 11/37 (29.73%), Postives = 16/37 (43.24%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRS 447 G +EG + G GE +P+Y GL P + Sbjct: 170 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 206 HSP 3 Score: 83.1889 bits (204), Expect = 2.596e-15 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNPSL+HAQSILAIWACQVVLMG YR+AGGPL Sbjct: 133 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPL 182 The following BLAST results are available for this feature:
BLAST of EY674965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674965 ID=EY674965; Name=EY674965; organism=Citrus sinensis; type=EST; length=992bpback to top |