EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_TOBAC (Uroporphyrinogen decarboxylase, chloroplastic OS=Nicotiana tabacum GN=DCUP PE=1 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 3.440e-97
Identity = 175/204 (85.78%), Postives = 196/204 (96.08%), Query Frame = 2
Query:   17 FRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            FR+ SENVDLVVEISLQPW VF+PDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDP+ T A+V++VREF PE+SVPYVG+ALTILR+EVNN+AAVLGFVGAPFTLASYVVEGGSSK+F+KIKRLAF++PKVLHALL+KF TSMAKY++YQAD+GAQAVQIFDSWATELSPVDFEEFSLPYLKQIV++VK THP+L LILYASG
Sbjct:   90 FRDRSENVDLVVEISLQPWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASG 293          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP2_ORYSJ (Uroporphyrinogen decarboxylase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0337600 PE=3 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.307e-96
Identity = 174/205 (84.88%), Postives = 192/205 (93.66%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SENVDLVVEISLQPW VFKPDGVILFSDILTPL GMNIPFDI+KGKGPVIFDP+ T A V++VREF PEE VPYVG+AL ILREEVNNEAAVLGFVGAPFTLASY VEGGSSK+FSKIK++AFS+P++LH LL+KFTTSMA Y++YQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIV++VK+THP+L LILYASG
Sbjct:   88 SFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIFDPLRTAAAVNEVREFVPEEWVPYVGQALNILREEVNNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKKMAFSEPEILHNLLQKFTTSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPELPLILYASG 292          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP2_ARATH (Uroporphyrinogen decarboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=At2g40490 PE=1 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.598e-94
Identity = 172/205 (83.90%), Postives = 189/205 (92.20%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFR+ SEN DLVVEISLQPW VFKPDGVILFSDILTPLSGMNIPFDI+KGKGP+IF+P  + A+V QVREF PEESVPYVG+AL  LR EVNNEAAVLGFVGAPFTL+SYV+EGGSSK+F++IKRLAFSQPKVLHALL+KFTTSM  Y++YQAD+GAQAVQIFDSWATELSPVDFEEFSLPYLKQIV  VKQTHP+L LILYASG
Sbjct:   92 SFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVREFVPEESVPYVGEALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQPKVLHALLQKFTTSMITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTHPNLPLILYASG 296          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_HORVU (Uroporphyrinogen decarboxylase (Fragment) OS=Hordeum vulgare GN=DCUP PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 2.725e-94
Identity = 170/204 (83.33%), Postives = 188/204 (92.16%), Query Frame = 2
Query:   17 FRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            FRE SENVDLVVEISLQPW VFKPDGVILFSDILTPL GMNIPFDI+KGKGPVI+DP+ T A V++VREF PEE VPYVG+AL +LR EV NEAAVLGFVGAPFTLASY VEGGSSK+FSKIKR+AF++P +LH LL+KFTTSMA Y++YQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIV++VK+THPDL LILYASG
Sbjct:   29 FRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNLLRGEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKRMAFAEPAILHNLLQKFTTSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPDLPLILYASG 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_MAIZE (Uroporphyrinogen decarboxylase, chloroplastic OS=Zea mays GN=LES22 PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.767e-93
Identity = 168/205 (81.95%), Postives = 188/205 (91.71%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SENVDLVVEISLQPW VFKPDGVILFSDILTPL GMNIPFDI+KGKGPVI+DP+ T A V++VREF PEE VPYVG+AL ILR+EV NEAAVLGFVGAPFTLASY VEGGSSK+F+ IK++AFS+P +LH LL+KFTTSMA Y++YQADNGAQAVQIFDSWATELSP DFEEFSLPYLKQIV++V++THPDL LILYASG
Sbjct:   91 SFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNILRQEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFTLIKKMAFSEPAILHNLLQKFTTSMANYIKYQADNGAQAVQIFDSWATELSPADFEEFSLPYLKQIVDSVRETHPDLPLILYASG 295          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CYAA5 (Uroporphyrinogen decarboxylase OS=Cyanothece sp. (strain ATCC 51142) GN=hemE PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 2.101e-70
Identity = 126/205 (61.46%), Postives = 160/205 (78.05%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SEN DL +EISLQPW  F+PDGVI+FSDILTPL GM IPFDI++ KGPVI  PI T  +VD +R  DPEES+P++   L  LR+EV N++ VLGFVG+P+TLA+Y +EG SSK+++ IK +AFSQP++LH+ L K   ++A YV+YQ D GAQ VQ+FDSWA +LSP D+E F+LPY +Q+V  VK+THPD  LILY SG
Sbjct:   46 SFRERSENPDLAIEISLQPWRAFQPDGVIMFSDILTPLPGMGIPFDIVESKGPVIDPPIRTKEQVDNLRPLDPEESLPFIKTILQSLRQEVGNQSTVLGFVGSPWTLAAYAIEGKSSKNYAIIKSMAFSQPEILHSFLSKIADAIAIYVRYQIDCGAQVVQLFDSWAGQLSPQDYETFALPYQQQVVRQVKETHPDTPLILYISG 250          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CYAP7 (Uroporphyrinogen decarboxylase OS=Cyanothece sp. (strain PCC 7424) GN=hemE PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.963e-69
Identity = 124/205 (60.49%), Postives = 157/205 (76.59%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SEN DL +EISLQPW  F+PDGVI+FSDILTPL G+ IPFDII+ KGP+I  PI T  ++D +  FDP+++VP+V   L  LR+EV N++ VLGFVGAP+TLA+Y VEG SSK +S IK +AFS+P +LH LL K    +A YV+YQ D GAQ VQ+FDSWA +L+P D++ F+LPY +Q+V  VK+THPD  LILY SG
Sbjct:   46 SFRERSENADLAIEISLQPWRAFQPDGVIMFSDILTPLPGIGIPFDIIESKGPIIDPPIRTQQQIDHLHPFDPDQTVPFVKTILKTLRQEVGNQSTVLGFVGAPWTLAAYAVEGKSSKTYSIIKSMAFSEPAILHQLLSKLADMVASYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQQVVRQVKETHPDTPLILYISG 250          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SYNSC (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9605) GN=hemE PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 6.760e-69
Identity = 127/205 (61.95%), Postives = 160/205 (78.05%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SEN DL  EIS+QP+H FKPDGVILFSDILTPL GM I FDII+ KGP I DPI + A+VD +R  +P ES+P+VG+ L  LR+ V NEAAVLGFVGAP+TLA+YVVEG SSK+++ IK + F +P++LH LL  F  S+A Y++YQ D+GAQ VQ+FDSWA +LSP D++ F+ PY K++V+ VK+THPD   ILY SG
Sbjct:   44 SFRERSENPDLSYEISMQPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMAQVDALRPLNPSESMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMVFREPEILHKLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKKTHPDTPFILYISG 248          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SYNPW (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain WH7803) GN=hemE PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.506e-68
Identity = 128/205 (62.44%), Postives = 160/205 (78.05%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SEN DL  EIS+QP++ FKPDGVILFSDILTPL GM I FDII+ KGP I DPI T A+VD +   +P ES+P+VG+ L  LR+ V NEAAVLGFVGAP+TLA+YVVEG SSK+++ IK +AF +P +LH LL  F  S+A+Y++YQ D+GAQ VQ+FDSWA +LSP D++ F+ PY K++V+ VKQTHPD   ILY SG
Sbjct:   44 SFRERSENPDLSYEISMQPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRTMAQVDALHPLNPAESMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPALLHKLLDHFAESIAQYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHPDTPFILYISG 248          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_MICAN (Uroporphyrinogen decarboxylase OS=Microcystis aeruginosa (strain NIES-843) GN=hemE PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.506e-68
Identity = 123/205 (60.00%), Postives = 157/205 (76.59%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SEN DL +EISLQPW  F+PDGVI+FSDILTPL+G+ IPFDII+ KGP+I  PI T A+VDQ+   DP++S+P++   L  LR+EV N++ VLGFVGAP+TLA+Y VEG  SK +S IK +AFS+P VLH  L K    +A YV+YQ D GAQ VQ+FDSWA +L+P D++ F+LPY +++V  VK+THPD  LILY SG
Sbjct:   46 SFRERSENADLAIEISLQPWRAFQPDGVIMFSDILTPLAGIGIPFDIIESKGPIIDSPIRTQAQVDQLNPLDPDQSLPFIKTILKTLRQEVGNKSTVLGFVGAPWTLAAYAVEGKGSKSYSVIKGMAFSEPSVLHQFLDKLADMIATYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQKVVRLVKETHPDTPLILYISG 250          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_TOBAC3.440e-9785.78Uroporphyrinogen decarboxylase, chloroplastic OS=N... [more]
DCUP2_ORYSJ1.307e-9684.88Uroporphyrinogen decarboxylase 2, chloroplastic OS... [more]
DCUP2_ARATH1.598e-9483.90Uroporphyrinogen decarboxylase 2, chloroplastic OS... [more]
DCUP_HORVU2.725e-9483.33Uroporphyrinogen decarboxylase (Fragment) OS=Horde... [more]
DCUP_MAIZE1.767e-9381.95Uroporphyrinogen decarboxylase, chloroplastic OS=Z... [more]
DCUP_CYAA52.101e-7061.46Uroporphyrinogen decarboxylase OS=Cyanothece sp. (... [more]
DCUP_CYAP73.963e-6960.49Uroporphyrinogen decarboxylase OS=Cyanothece sp. (... [more]
DCUP_SYNSC6.760e-6961.95Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_SYNPW1.506e-6862.44Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_MICAN1.506e-6860.00Uroporphyrinogen decarboxylase OS=Microcystis aeru... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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