EY674949

Overview
NameEY674949
Unique NameEY674949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1037
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674949 vs. ExPASy Swiss-Prot
Match: SOXC_RHOSG (Dibenzothiophene desulfurization enzyme C OS=Rhodococcus sp. (strain IGTS8) GN=soxC PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.688e-23
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3 
Query:   42 IAHVFGFHHLMLATVRLFATPAQWQTWFSLTASNNWFWGNTLNPLDTRTV------VKRHTGWREFSGQKNFCSGANDSEMLIASAI---DESAGGKLLIAAIPSARSGIILHNDWNNMGQRQTDSGSVTFKRVRVEESDLLLDPGPLSTPF-----ACLRPLIAQLHFANIFLGIADGAFEEARQIHPGKNPPMVP 590
            + H+FG+H      + L  +  Q +  ++  A NNW+ GN  +  ++  +           G    +G K+FCSGA  S++L    +   D    G ++ AAIP++R+G+  ++DW  +G RQTDSGS  F  V+VE  ++L  P      F       L   IAQL FAN++LGIA GA + AR+    +  P  P
Sbjct:   90 LGHLFGYHLTNAPMIELIGSQEQEEHLYTQIAQNNWWTGNASSENNSHVLDWKVSATPTEDGGYVLNGTKHFCSGAKGSDLLFVFGVVQDDSPQQGAIIAAAIPTSRAGVTPNDDWAAIGMRQTDSGSTDFHNVKVEPDEVLGAPNAFVLAFIQSERGSLFAPIAQLIFANVYLGIAHGALDAAREYTRTQARPWTP 286
The following BLAST results are available for this feature:
BLAST of EY674949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SOXC_RHOSG4.688e-2332.99Dibenzothiophene desulfurization enzyme C OS=Rhodo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-F05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674949 ID=EY674949; Name=EY674949; organism=Citrus sinensis; type=EST; length=1037bp
CCTGCCGGGACCGGGTCCGGGATTCCCGGGTCGACAGCTCCATCGCCCAC
GTATTCGGCTTCCATCACCTGATGCTTGCCACCGTCCGGTTGTTCGCCAC
GCCCGCACAATGGCAAACCTGGTTCAGCCTGACGGCCAGCAACAACTGGT
TCTGGGGTAACACCCTGAACCCGCTGGACACCCGCACGGTGGTCAAGCGC
CACACGGGTTGGCGGGAATTCTCGGGACAGAAGAACTTCTGCTCCGGGGC
CAACGACTCGGAGATGCTGATCGCCTCGGCCATCGATGAAAGCGCTGGCG
GCAAGTTGCTGATCGCAGCGATTCCCAGCGCTCGCAGCGGGATCATCCTG
CACAACGACTGGAACAACATGGGCCAGCGCCAGACCGACAGCGGCAGCGT
GACTTTCAAACGCGTACGCGTGGAAGAGTCCGACCTGCTGCTGGACCCGG
GGCCGCTGAGCACGCCGTTCGCCTGCCTGCGCCCGCTGATTGCGCAACTG
CACTTCGCGAATATCTTCCTCGGCATCGCCGATGGCGCATTCGAAGAAGC
ACGCCAAATACACCCTGGAAAAAACCCGCCCATGGTTCCGTTCCAGCGCC
AGCCCCACCACCCAAGACCCTTACTTCCTCAGCCCCTACGGCGACTTCTG
GGTGGCGCTGCCAAGCACCCGCCGGTTGGTGGACCGCCCAGGGGAAGTAA
TTGAAAGCGGGCTGGGGCCAAGGGCTCCGCCCCTGACCCAGCCAGGAAAC
GCGGCCCCACCGCCAATTGCCATCCCCCCCCCCCAAAATCCCCCCCCCGC
CCCCAAATGGCCCGGGGAAATTTTTGTTAACAGGGGCTTTTCAAAGGGTC
CCCGGGGGCGGGGGGGGGAAAAAAACCCCCCCCGGAAAACCCCCCTAAAA
AAGGAACAGGGGGGCCAATTTTGCGCCCCCCCCCAAAAGCCGCGGGAATG
GAACCCCCTGGGGGAAAAAACAAGATCTTTTTTGGTAAAAAATGGGGGGG
GGAAAAAGGTGGGGGGTCCCCCAATAAAACGCGGGCC
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