EY674921

Overview
NameEY674921
Unique NameEY674921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8521 contig Csv1_Contig8521:2..471. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BORPD (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=aat PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.487e-59
Identity = 107/154 (69.48%), Postives = 123/154 (79.87%), Query Frame = 2
Query:    8 VPGPESRVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGRLDSTGRLLP 469
            +P  + RVDT F  V+A  +APRDGQ GTWIT  M+QAY AWH AG  HS+ETWIDGELAGGLYGI+LGRMFFGESMFTR P+ASK+ALAYLV ++   GV+WIDCQQQTRHLASLGARPVPR+RF++H+R A   P  AW  GRLDS G L P
Sbjct:   92 LPRVQVRVDTEFDAVVAQCAAPRDGQAGTWITADMQQAYRAWHAAGVAHSVETWIDGELAGGLYGISLGRMFFGESMFTRVPDASKVALAYLVAFLRRAGVEWIDCQQQTRHLASLGARPVPRARFVEHIRQAIAGPAPAWQSGRLDSQGSLHP 245          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BORBR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bordetella bronchiseptica GN=aat PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 4.712e-56
Identity = 101/148 (68.24%), Postives = 119/148 (80.41%), Query Frame = 2
Query:   26 RVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGRLDSTGRLLP 469
            RVDTAFA V+   +APR GQPGTWI+PA++QAY +WH AG+VHSIETWIDGELAGGLYG++LGRMF+GESMF RA +ASKIALA+LV ++    V WIDCQQQT HLA LGARPVPR+RF++H+  A   P L W  GRLDS G L P
Sbjct:   98 RVDTAFARVLHECAAPRHGQPGTWISPAVQQAYRSWHAAGFVHSIETWIDGELAGGLYGVSLGRMFYGESMFARATDASKIALAHLVAFLRRHQVAWIDCQQQTGHLARLGARPVPRARFIEHIAHAVAQPRLPWRSGRLDSAGMLHP 245          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BORPA (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bordetella parapertussis GN=aat PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 6.155e-56
Identity = 101/148 (68.24%), Postives = 119/148 (80.41%), Query Frame = 2
Query:   26 RVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGRLDSTGRLLP 469
            RVDTAFA V+   +APR GQPGTWI+PA++QAY +WH AG+VHSIETWIDGELAGGLYG++LGRMF+GESMF RA +ASKIALA+LV ++    V WIDCQQQT HLA LGARPVPR+RF++H+  A   P L W  GRLDS G L P
Sbjct:   98 RVDTAFARVLHECAAPRHGQPGTWISPAVQQAYHSWHAAGFVHSIETWIDGELAGGLYGVSLGRMFYGESMFARATDASKIALAHLVAFLRRHQVAWIDCQQQTGHLARLGARPVPRARFIEHIAHAVAQPRLPWRSGRLDSAGMLHP 245          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BORA1 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bordetella avium (strain 197N) GN=aat PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 7.287e-49
Identity = 94/147 (63.95%), Postives = 107/147 (72.79%), Query Frame = 2
Query:   26 RVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGRLDSTGRLL 466
            RVDTAFA VMA  +  RDGQ GTWITP ++ AY AWHE G  HSIETWID  L GGLYGI+LG MFFGESMF  A +ASKIALAYLV +++   V WIDCQQQTRHLASLGARP+PR++FLQHV      P   W  G L   G ++
Sbjct:   98 RVDTAFARVMAACAGRRDGQAGTWITPEVQAAYCAWHEQGQAHSIETWIDDHLVGGLYGISLGGMFFGESMFAHATDASKIALAYLVAFLTRHEVDWIDCQQQTRHLASLGARPLPRAQFLQHVARVLAKPAPPWRVGVLRHAGDIV 244          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_LEPCP (Leucyl/phenylalanyl-tRNA--protein transferase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=aat PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.572e-43
Identity = 85/151 (56.29%), Postives = 106/151 (70.20%), Query Frame = 2
Query:   11 PGPESRVDTAFATVMAHPS-APRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHP--------PLAWSR 436
            PG E R+D+AFA V+ H S  PR+GQ GTWI P ++ AY+A H AG  HS ETW+DGEL GGLYG+N+GRMF+GESMF R  +ASKIALA LV +  A  + WIDCQ +T HLASLGA+PVPR++F  H+R     P        P +W+R
Sbjct:   93 PGNEVRIDSAFADVIDHCSRTPREGQDGTWIVPEVKAAYVALHRAGSAHSFETWVDGELVGGLYGVNIGRMFYGESMFARRTDASKIALAALVAFCLAHEIAWIDCQMETEHLASLGAQPVPRAQFEAHLRRVVDLPAPKDWFYDPSSWAR 243          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_CHRVO (Leucyl/phenylalanyl-tRNA--protein transferase OS=Chromobacterium violaceum GN=aat PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.008e-39
Identity = 77/133 (57.89%), Postives = 94/133 (70.68%), Query Frame = 2
Query:   20 ESRVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHP 418
            E RVD+AF  VM   + PR GQ GTWI P M  AY   H+ GY HS ETWIDGELAGGLYG+++GRMF+GESMF+R  +ASK+A  ++VR++ AQGV  IDCQ  T HLASLGAR + R  FL  ++    HP
Sbjct:   86 EIRVDSAFPEVMRACAEPRAGQDGTWIVPEMVAAYCRLHQIGYAHSFETWIDGELAGGLYGVSIGRMFYGESMFSRRRDASKLAFVHMVRHLQAQGVTMIDCQMHTEHLASLGARLISRDVFLATLKENVRHP 218          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_METPP (Leucyl/phenylalanyl-tRNA--protein transferase OS=Methylibium petroleiphilum (strain PM1) GN=aat PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 8.929e-39
Identity = 81/148 (54.73%), Postives = 97/148 (65.54%), Query Frame = 2
Query:    5 AVPGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHV-RAATVHPPLAWSRGR 442
            A P  E R+D  FA V+ A  + PR+GQ GTWI P ++ AY  WH  G VHS ETW+DG L GGLYG+NLGRMFFGESMF+ A +ASKIALA LV +  A  +  IDCQQ+T HL SLGAR + R  F  H+ R     PP  W+  R
Sbjct:   89 AAPHCEVRIDHDFAAVIHACATTPREGQDGTWIQPELQAAYTEWHRLGAVHSFETWVDGRLLGGLYGVNLGRMFFGESMFSHATDASKIALAALVAFCRANDIALIDCQQRTAHLGSLGAREIDRPAFEGHLARTVAQRPPEDWTYHR 236          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_CUPTR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=aat PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.166e-38
Identity = 81/137 (59.12%), Postives = 95/137 (69.34%), Query Frame = 2
Query:   20 ESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLA 427
            E RVD  F  VM A  S PR+GQ GTWIT A+  AY A H  G  HS+E+W  GE  GGLYG+ LGRMFFGESMF    +ASKIALA L  ++   GV  IDCQQ+T HLASLGARP+PR+ F+ HVRAAT  P ++
Sbjct:   93 EIRVDHDFLAVMRACASTPREGQDGTWITDAIIAAYGALHRNGLAHSVESWYRGERVGGLYGVALGRMFFGESMFAHRTDASKIALAALCAFLGNHGVAMIDCQQETDHLASLGARPIPRAEFVAHVRAATAQPAIS 229          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURPS (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia pseudomallei GN=aat PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 5.787e-38
Identity = 80/141 (56.74%), Postives = 93/141 (65.96%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            P  E RVD  FA VM A   APR GQ GTWIT  +  AY + H AG  HSIETW+DG   GGLYG++ GRMFFGESM+  A +ASKIALA LV ++    V+ IDCQQ T HLASLG R + R  F+ HVR A   PP+ W
Sbjct:   90 PRWEIRVDCDFAGVMRACAQAPRRGQRGTWITAEIIDAYSSLHRAGDAHSIETWLDGRRVGGLYGVSFGRMFFGESMYAHASDASKIALAALVAHLREHRVEMIDCQQNTSHLASLGGREIARKTFVAHVRRAVAEPPIPW 230          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURP6 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia pseudomallei (strain 668) GN=aat PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 5.787e-38
Identity = 80/141 (56.74%), Postives = 93/141 (65.96%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            P  E RVD  FA VM A   APR GQ GTWIT  +  AY + H AG  HSIETW+DG   GGLYG++ GRMFFGESM+  A +ASKIALA LV ++    V+ IDCQQ T HLASLG R + R  F+ HVR A   PP+ W
Sbjct:   90 PRWEIRVDCDFAGVMRACAQAPRRGQRGTWITAEIIDAYSSLHRAGDAHSIETWLDGRRVGGLYGVSFGRMFFGESMYAHASDASKIALAALVAHLREHRVEMIDCQQNTSHLASLGGREIARKTFVAHVRRAVAEPPIPW 230          
The following BLAST results are available for this feature:
BLAST of EY674921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_BORPD3.487e-5969.48Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BORBR4.712e-5668.24Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BORPA6.155e-5668.24Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BORA17.287e-4963.95Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_LEPCP1.572e-4356.29Leucyl/phenylalanyl-tRNA--protein transferase OS=L... [more]
LFTR_CHRVO4.008e-3957.89Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_METPP8.929e-3954.73Leucyl/phenylalanyl-tRNA--protein transferase OS=M... [more]
LFTR_CUPTR1.166e-3859.12Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_BURPS5.787e-3856.74Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BURP65.787e-3856.74Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674921 ID=EY674921; Name=EY674921; organism=Citrus sinensis; type=EST; length=470bp
CCGGGCGGTTCCGGGTCCGGAATCCCGGGTCGACACGGCCTTCGCCACGG
TGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAGCCGGGCACCTGGATC
ACCCCCGCCATGCGGCAGGCCTACCTCGCCTGGCACGAGGCCGGCTACGT
CCACAGCATCGAAACCTGGATCGACGGCGAACTGGCCGGCGGCCTGTACG
GCATCAACCTGGGCCGCATGTTCTTCGGCGAATCGATGTTCACGCGCGCG
CCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGTGCGCTACGTCAGCGC
GCAGGGCGTGCAGTGGATCGACTGCCAGCAGCAGACCCGCCATCTGGCCA
GCCTGGGCGCGCGGCCGGTGCCACGCTCGCGCTTCCTGCAACACGTGCGC
GCCGCCACCGTGCACCCGCCGCTGGCCTGGTCGCGCGGACGGCTGGACAG
CACGGGGCGGCTGCTGCCCC
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