EY674907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674907 vs. ExPASy Swiss-Prot
Match: TNPO2_HUMAN (Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 9.792e-33 Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 24 EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXPRLKIILQHLMMAFWK 464 E+LP L+P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD NKRVQEAACS P L IL L+ AF K Sbjct: 390 ELLPHLLPLLKGLLF---HPEWVVKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVS----QPPDMHLKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGK 529 HSP 2 Score: 51.2174 bits (121), Expect = 9.792e-33 Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 442 TL*WLFGKYQRRNLRIVYDAIGTLADAVGIQTKPTLFIFEILMPPFIGK 588 TL + FGKYQ +NL I+YDAIGTLAD+VG +I + LMPP I K Sbjct: 522 TLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQPEYI-QKLMPPLIQK 569
BLAST of EY674907 vs. ExPASy Swiss-Prot
Match: TNPO2_MOUSE (Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.794e-33 Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 24 EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXPRLKIILQHLMMAFWK 464 E+LP L+P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD NKRVQEAACS P L IL L+ AF K Sbjct: 390 ELLPHLLPLLKGLLF---HPEWVVKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVS----QPPDMHLKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGK 529 HSP 2 Score: 51.2174 bits (121), Expect = 9.794e-33 Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 442 TL*WLFGKYQRRNLRIVYDAIGTLADAVGIQTKPTLFIFEILMPPFIGK 588 TL + FGKYQ +NL I+YDAIGTLAD+VG +I + LMPP I K Sbjct: 522 TLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQPEYI-QKLMPPLIQK 569
BLAST of EY674907 vs. ExPASy Swiss-Prot
Match: TNPO_DICDI (Transportin OS=Dictyostelium discoideum GN=tnpo PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.162e-32 Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 3 SQMFSVYEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXPRLKIILQHLMMAFWK 464 S +F E L +P+I+ +++ W RE+A+LALGAIA+G GL PHLS+++ +LI L+D PL+RSI+CWTLSR+S +I Q +GR+ +++ LL RI+D NK+VQEAACS P L++IL + AF K Sbjct: 419 SGIFPDAEYLSVTLPLIEQRMNEQNP--WPVRESAILALGAIADGSKNGLAPHLSKVIPYLINTLNDPKPLVRSITCWTLSRYSYWIAQ----ADGRDYLHPLVVNLLNRIVDNNKKVQEAACSAFATLEEEADLLLIPYLQMILVTFVNAFGK 566 HSP 2 Score: 44.669 bits (104), Expect = 2.162e-32 Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 1 Query: 457 FGKYQRRNLRIVYDAIGTLADAVGIQ-TKPTLFIFEILMPPFIGKMGTWLSQIQKKNLL 630 FGKYQ +NL I+YDAI TLA VG + KP L IL+PP + K KNLL Sbjct: 564 FGKYQAKNLLILYDAISTLAKVVGNELNKPEL--INILVPPLLQKFNA--LDDSNKNLL 618
BLAST of EY674907 vs. ExPASy Swiss-Prot
Match: TNPO1_MOUSE (Transportin-1 OS=Mus musculus GN=Tnpo1 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 2.163e-32 Identity = 62/147 (42.18%), Postives = 88/147 (59.86%), Query Frame = 3 Query: 24 EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXPRLKIILQHLMMAFWK 464 E+LP ++P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD+NKRVQEAACS P L IL L+ AF K Sbjct: 401 ELLPHILPLLKELLF---HHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS----QPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK 540 HSP 2 Score: 50.447 bits (119), Expect = 2.163e-32 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 442 TL*WLFGKYQRRNLRIVYDAIGTLADAVGIQTKPTLFIFEILMPPFIGK 588 TL + F KYQ +NL I+YDAIGTLAD+VG +I ++LMPP I K Sbjct: 533 TLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYI-QMLMPPLIQK 580
BLAST of EY674907 vs. ExPASy Swiss-Prot
Match: TNPO1_HUMAN (Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 2.163e-32 Identity = 62/147 (42.18%), Postives = 88/147 (59.86%), Query Frame = 3 Query: 24 EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXPRLKIILQHLMMAFWK 464 E+LP ++P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD+NKRVQEAACS P L IL L+ AF K Sbjct: 401 ELLPHILPLLKELLF---HHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS----QPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK 540 HSP 2 Score: 50.447 bits (119), Expect = 2.163e-32 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 442 TL*WLFGKYQRRNLRIVYDAIGTLADAVGIQTKPTLFIFEILMPPFIGK 588 TL + F KYQ +NL I+YDAIGTLAD+VG +I ++LMPP I K Sbjct: 533 TLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYI-QMLMPPLIQK 580
BLAST of EY674907 vs. ExPASy Swiss-Prot
Match: TNPO1_BOVIN (Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 2.163e-32 Identity = 62/147 (42.18%), Postives = 88/147 (59.86%), Query Frame = 3 Query: 24 EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXPRLKIILQHLMMAFWK 464 E+LP ++P+++ L W +E+ +L LGAIAEGC++G+ P+L E++ LI L DK L+RSI+CWTLSR++ ++V Q + ++ LLKRILD+NKRVQEAACS P L IL L+ AF K Sbjct: 401 ELLPHILPLLKELLF---HHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS----QPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK 540 HSP 2 Score: 50.447 bits (119), Expect = 2.163e-32 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 442 TL*WLFGKYQRRNLRIVYDAIGTLADAVGIQTKPTLFIFEILMPPFIGK 588 TL + F KYQ +NL I+YDAIGTLAD+VG +I ++LMPP I K Sbjct: 533 TLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYI-QMLMPPLIQK 580
BLAST of EY674907 vs. ExPASy Swiss-Prot
Match: IMB2_SCHPO (Importin subunit beta-2 OS=Schizosaccharomyces pombe GN=kap104 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.069e-29 Identity = 58/146 (39.73%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 27 ILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACSXXXXXXXXXXXXXXPRLKIILQHLMMAFWK 464 +L ++P ++ L++ E WK +EA VLA+GAIAEGC+ G+ +L E+ + + LLD K PL+R+I+CWTL R+SK+ ++ ++ F +L GLL+ ++D NK+VQEA CS P L+ IL +L AF K Sbjct: 411 LLEIILPHLKQSLTS---EDWKVQEAGVLAVGAIAEGCMDGMVQYLPELYPYFLSLLDSKKPLVRTITCWTLGRYSKWASCLESEEDRQKYFVPLLQGLLRMVVDNNKKVQEAGCSAFAILEEQAGPSLVPYLEPILTNLAFAFQK 553 HSP 2 Score: 40.817 bits (94), Expect = 2.069e-29 Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = 1 Query: 439 STL*WLFGKYQRRNLRIVYDAIGTLADAVGIQTKPTLFIFEILMPPFIGK 588 + L + F KYQR+N+ I+YDA+ TLAD VG +I E+L+ P + K Sbjct: 545 TNLAFAFQKYQRKNVLILYDAVQTLADYVGSALNDKRYI-ELLITPLLQK 593
BLAST of EY674907 vs. ExPASy Swiss-Prot
Match: IMB2_YEAST (Importin subunit beta-2 OS=Saccharomyces cerevisiae GN=KAP104 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.514e-17 Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 21 YEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQDIGHQNGREQFEKVLMGLLKRILDTNKRVQEAACS 374 ++++ P ++ L G + W REA +LALGA+AEG +K L ++ FL+ L+DK+ +R ++CWTLSRFS +I+QD E VL ++ ++D K VQEAA S Sbjct: 416 HQVMDIAFPFLREHL---GSDRWFIREATILALGAMAEGGMKYFNDGLPALIPFLVEQLNDKWAPVRKMTCWTLSRFSPWILQD-----HTEFLIPVLEPIINTLMDKKKDVQEAAIS 525 HSP 2 Score: 31.5722 bits (70), Expect = 3.514e-17 Identity = 20/55 (36.36%), Postives = 29/55 (52.73%), Query Frame = 1 Query: 436 YSTL*WLFGK----YQRRNLRIVYDAIGTLADAVGIQTKPTLFIFEILMPPFIGK 588 YS L F K Y+++NL I+YDAIG A+ + +I++PP I K Sbjct: 544 YSQLLTSFDKCLKYYKKKNLIILYDAIGRFAEKCALDET----AMQIILPPLIEK 594 The following BLAST results are available for this feature:
BLAST of EY674907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY674907 ID=EY674907; Name=EY674907; organism=Citrus sinensis; type=EST; length=952bpback to top |