EY674839

Overview
NameEY674839
Unique NameEY674839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSJ (Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.477e-70
Identity = 140/175 (80.00%), Postives = 145/175 (82.86%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            DAEDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF   S+  P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFSV--PAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSI (Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.477e-70
Identity = 140/175 (80.00%), Postives = 145/175 (82.86%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            DAEDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF   S+  P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFSV--PAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT1_SORBI (Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.297e-70
Identity = 140/175 (80.00%), Postives = 144/175 (82.29%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            DAEDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.297e-70
Identity = 140/175 (80.00%), Postives = 144/175 (82.29%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            DAEDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.297e-70
Identity = 140/175 (80.00%), Postives = 144/175 (82.29%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            DAEDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 7.330e-70
Identity = 139/175 (79.43%), Postives = 144/175 (82.29%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            D EDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   ++  P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNV--PAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT3_PEA (Actin-3 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.250e-69
Identity = 139/175 (79.43%), Postives = 144/175 (82.29%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +AEDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 EAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.250e-69
Identity = 139/175 (79.43%), Postives = 143/175 (81.71%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            D EDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.250e-69
Identity = 138/175 (78.86%), Postives = 145/175 (82.86%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            DAEDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRV+P+EHPVLLTEAPLNPKANREKMTQIMF   ++  P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 DAEDIEPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVSPDEHPVLLTEAPLNPKANREKMTQIMFETFNV--PAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.250e-69
Identity = 139/175 (79.43%), Postives = 143/175 (81.71%), Query Frame = 2 
Query:    2 DAEDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            D EDI PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 167
The following BLAST results are available for this feature:
BLAST of EY674839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
ACT2_ORYSJ1.477e-7080.00Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE... [more]
ACT2_ORYSI1.477e-7080.00Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3... [more]
ACT1_SORBI4.297e-7080.00Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1[more]
ACT1_ORYSJ4.297e-7080.00Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE... [more]
ACT1_ORYSI4.297e-7080.00Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT7_ARATH7.330e-7079.43Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT3_PEA1.250e-6979.43Actin-3 OS=Pisum sativum PE=2 SV=1[more]
ACT1_TOBAC1.250e-6979.43Actin OS=Nicotiana tabacum PE=3 SV=1[more]
ACT13_SOLTU1.250e-6978.86Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1[more]
ACT11_ARATH1.250e-6979.43Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-B12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674839 ID=EY674839; Name=EY674839; organism=Citrus sinensis; type=EST; length=922bp
CGATGCTGAGGATATTCACCCCCTTGTTTGTGACAATGGAACTGGAATGG
TGAAGGCTGGATTTGCTGGAGATGATGCTCCAAGGGCAGTATTCCCTAGT
ATTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAA
GGATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTT
TGAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAA
AAGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGA
GCACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAG
AGAAGATGACCCAAATTATGTTTTGAAAACTTTCAATGTGCCAGCCATGT
ACGTTTGCCATCCAGGCTGTTCTATCTCTTTTATGCCAGTGGTCGTACAA
ATGGTATTGTGCTGGATTCTGGGTGAAAGGTGTGGCTCATACTGTAACCA
TTTTATAAAAGGAAATGCCCTTCCCTCATGGCCATTCCTCGTTTGGACTT
TGGCGGGTCATAATCTCAATGGATGCCTTTGAAGAAAATTCTTACCTGAA
AGAAGTTAAAATGTATAACCAACCCCGCCCAAATGGGAAATTTTTCCACT
GTCATGAAAAGAAAAATCTTTCTTTTTTTTTTCCCCTAAAAAATATATAC
CAAAAACCTTAAAAACCGCCACAAAACACTCCCTTCTCTTTTTTAGAAAA
AACATTAAAACTCACCTATAAAAACAAAAAAAAACACCAATTTGGAACAA
AAAAAAATCACTTTGTGCCCAAAAAATATATTATTCAAAACCACCCCTCT
CAACGGAGAAGGGAAACATCCGGCCGGGGATTCTAATATGAACCCAACAC
TCCCACCCTAACCAACCCCTCT
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