EY674835

Overview
NameEY674835
Unique NameEY674835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1058
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674835 vs. ExPASy Swiss-Prot
Match: Y3028_ARATH (Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.828e-17
Identity = 46/108 (42.59%), Postives = 70/108 (64.81%), Query Frame = 3 
Query:  240 IHREPNLRIDLTPWDLKLIQFDTIQKGLLFRKPPNDNTDTSSLNLIHHLKTSLSRTLDYFPALAGRLTTIEHHDDSNTISV*LNCNNAGAEFVHATADGVSVANIISP 563
            I++E   +I LTP+DL L+  D  Q+GLLF KP  +       + I  L+TSLS  LD +   AGRL  +E+H+D  T+S  +NC+ +GA+F+HA +D VSV++++ P
Sbjct:   17 INQEGREKIHLTPFDLNLLYVDYTQRGLLFPKPDPET------HFISRLRTSLSSALDIYFPFAGRLNKVENHEDE-TVSFYINCDGSGAKFIHAVSDSVSVSDLLRP 117
The following BLAST results are available for this feature:
BLAST of EY674835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3028_ARATH8.828e-1742.59Uncharacterized acetyltransferase At3g50280 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-B06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674835 ID=EY674835; Name=EY674835; organism=Citrus sinensis; type=EST; length=1058bp
CCACGCGTCCGGCAAAATGGTATTGCCCCCTTAGATCAGAAGGACTCTTG
TATCAATTTTTTAGCTTCCCCAAATTCTGTTTCTGTACACTGTAAGTATT
TTTCATCCTCATTTTCTTGTATCCATTATGCGTTATATCACCATTTATTT
TCATCTCGATATTTGGTTTCAATTAGATCACCGGAGGAAATAAGATGGGA
AGAACACAGATAATCTCAAAGAGCACCGTCTGTGCAGCAATTCACAGGGA
ACCAAACCTTAGAATCGATTTAACTCCATGGGATCTTAAGCTCATTCAAT
TTGATACCATTCAGAAAGGACTTCTCTTCCGCAAACCTCCAAATGATAAC
ACCGATACCAGCAGCTTGAACTTGATCCACCACCTCAAGACCTCCCTTTC
ACGTACGCTAGACTACTTTCCCGCACTTGCCGGTCGCCTAACCACCATCG
AGCATCATGATGACAGCAACACAATTTCTGTTTAACTAAATTGCAACAAT
GCCGGCGCAGAGTTTGTACACGCCACGGCCGATGGAGTCTCTGTCGCAAA
TATCATTTCACCTGTTTATGTTTCCTAAGGAAATTGTTTACTCTTTTTTT
CCCATAAAATGGGAGTAACAAATTGTCAGTGTATCTTCCAAGGCAAAGCC
GTTTGCTTTGGGGTTTCAAGTGGAAAAACCTTTGGTGGAAGGGAACCTTC
CATCGCCTTGCCCTATCAAATCCCCCCGTTTGTTGAACGGGCCTTTTCTT
TTTTGGCATTTTCTTCAATTTCTTTGGGCCTGAAAAACCCCACCGGGGGG
TTTTGAAATTGGTATTTTAAAAAATTTTCCAATTTTTAAAAAAAAGGGGG
GTTTTTTCCTTTCAAGAAATAAAAAAATAATTTTTCCCCCAATTTATCCC
CCTCTCCCCTCTCCTGTGGGAGAAATTATTATAAACCTCTCTCTTGGGAA
AAAATCTCCCCACACCCCCACACCCCCTCCCGCCTAAAAATTTTTGGAGG
AAAAGAAATAGAGGGGGTGGGTTTTTTTTTCCTCTCCCCTTTTTTTTTAT
TACATAAA
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