EY674798

Overview
NameEY674798
Unique NameEY674798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1032
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: DDH_HAEIN (2-hydroxyacid dehydrogenase homolog OS=Haemophilus influenzae GN=ddh PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.635e-47
Identity = 90/189 (47.62%), Postives = 124/189 (65.61%), Query Frame = 1
Query:    1 LPAANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLGAGCVKRKAHLFFKDRS 567
            L AA      +VRVPAYSP AVAEH + L++ LNRR+HRAY RTR+ +FSL GL GF++           +IG    +I+ GFG  +LAY+P+ NP VE LG +YV L EL  +S +I+LHCP T ++ HL+N ++ A M+ G M++NT RG L+DT A I ALK+  +G LG    + +  LFF+D+S
Sbjct:   84 LKAAQELGIQVVRVPAYSPEAVAEHTIGLMMTLNRRIHRAYQRTREANFSLEGLIGFNMYGRTVGVIGTGKIGIAVMRILKGFGMNILAYDPFKNPVVEELGGQYVELDELYAKSHVITLHCPATPENYHLLNCEAFAKMKDGVMIVNTSRGSLIDTQAAIDALKQRKIGALGMDVYENERDLFFEDKS 272          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: LDHD_ECOLI (D-lactate dehydrogenase OS=Escherichia coli (strain K12) GN=ldhA PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.947e-45
Identity = 89/189 (47.09%), Postives = 119/189 (62.96%), Query Frame = 1
Query:    1 LPAANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLGAGCVKRKAHLFFKDRS 567
            L AA      +VRVPAY P AVAEHA+ +++ LNRR+HRAY RTRD +FSL GLTGF +           +IG    +I+ GFG +LLA++PYP+     LG  YV L  L  ES +ISLHCPLT ++ HL+N  +   M+ G M++NT RG L+D+ A I ALK   +G LG    + +  LFF+D+S
Sbjct:   84 LDAAKELGLKVVRVPAYDPEAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEAAFEQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKS 272          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: DDH1_SCHPO (2-hydroxyacid dehydrogenase homolog 1 OS=Schizosaccharomyces pombe GN=SPAC186.07c PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.467e-41
Identity = 84/190 (44.21%), Postives = 124/190 (65.26%), Query Frame = 1
Query:    1 LPAANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMA-GFGCQLLAYNPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLGAGCVKRKAHLFFKDRS 567
            L AA     T+VRVPAYSP+AVAE+ + L+L+LNR++HRAY R R+ DF+L+GL G DL           +IG   AK +  GFGC++LA++  PN ++E  G ++V   E+L ++  + LHCPLT D++HL++ + LA M+ G  +INT RGGLVDT AL+ A++ G +G       + +  LF++D S
Sbjct:   84 LKAAADNGITVVRVPAYSPYAVAEYTIGLLLSLNRKIHRAYVRVREDDFNLNGLLGHDLHGKTIGLLGTGRIGGLVAKCLKLGFGCEVLAHDIKPNKELEKFGIQFVEQQEVLAKADFLCLHCPLTPDTEHLVDEKLLASMKKGVKIINTSRGGLVDTKALVKAIESGQVGGCAMDVYEGERRLFYRDLS 273          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: DDH_ZYMMO (2-hydroxyacid dehydrogenase homolog OS=Zymomonas mobilis GN=ddh PE=3 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 2.724e-39
Identity = 85/192 (44.27%), Postives = 123/192 (64.06%), Query Frame = 1
Query:    1 LPAANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMA-GFGCQLLAYNPYPNPQV-EALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLGAGCVKRKAHLFFKDRSE 570
            L AA      +VRVPAYSP++VAE+AV ++L LNR++ R   R R+ +FSL GL G D+            IG+ FA IM  GFG  ++AY P+P+P++ + +G R+ SL E++  S IISLHCPLT ++ H+IN ++LA  + G  L+NT RGGLVDT A+I +LK   LG   A   + +  LFF++ ++
Sbjct:   84 LDAAKKLNIKVVRVPAYSPYSVAEYAVGMLLTLNRQISRGLKRVRENNFSLEGLIGLDVHDKTVGIIGVGHIGSVFAHIMTHGFGANVIAYKPHPDPELAKKVGFRFTSLDEVIETSDIISLHCPLTPENHHMINEETLARAKKGFYLVNTSRGGLVDTKAVIKSLKAKHLGGYAADVYEEEGPLFFENHAD 275          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: DDH2_SCHPO (2-hydroxyacid dehydrogenase homolog 2 OS=Schizosaccharomyces pombe GN=SPAC186.02c PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.306e-38
Identity = 79/190 (41.58%), Postives = 121/190 (63.68%), Query Frame = 1
Query:    1 LPAANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMA-GFGCQLLAYNPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLGAGCVKRKAHLFFKDRS 567
            L AA+ +  T+V VP+YSP AV+E  V L+L+LNR++HRAY R R+ DF++ GL G D+           +IG+  AK    GFGC +LAY+  P+ ++E  G ++V  +E+L ++  + LHCPLT  + H++N+ SLA M+ G  ++NT RGGL+DT AL+ A+  G +G       + + +LF+KD S
Sbjct:   84 LKAASEYKITVVHVPSYSPFAVSEFTVGLLLSLNRKIHRAYVRVREDDFNIVGLLGCDIHGKTVGVIGTGKIGSNVAKCFKMGFGCDVLAYDINPDKKLENYGVQFVEQNEVLKKADFLCLHCPLTPSTTHIVNSDSLALMKKGVTIVNTSRGGLIDTKALVDAIDSGQVGGCAIDVYEGERNLFYKDLS 273          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: LDHD_DICDI (Putative D-lactate dehydrogenase OS=Dictyostelium discoideum GN=ldhA PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.212e-32
Identity = 69/191 (36.13%), Postives = 116/191 (60.73%), Query Frame = 1
Query:    1 LPAANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIM-AGFGCQLLAYNPYPNPQVEALGARYV-SLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLGAGCVKRKAHLFFKDRS 567
            L  AN     ++RVPAYSP+AV+E+A++LI+ALNR+ H+A++R RD +F ++G+ GF++            IG    +++  GFG +++AY+   N  V  +G  YV +L E+  +  +ISLH PL + +K+++N++S+  M+ G M+IN  RG LV+    I  LK G +  LG    + +   F++D +
Sbjct:   83 LDTANKLGIPVLRVPAYSPNAVSEYALSLIMALNRKTHKAHDRVRDANFEINGMEGFNMVSKVYGIVGTGNIGEQLCRVLKLGFGAKVIAYDIIENKAVTDIGIEYVKTLDEIWKQCDVISLHTPLNSQTKYMVNSESIEKMRDGVMIINVSRGALVNASDAIVGLKSGKISSLGMDVYENETDYFYQDHN 273          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: VANH_ENTFA (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecalis GN=vanHB PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 3.574e-23
Identity = 71/207 (34.30%), Postives = 103/207 (49.76%), Query Frame = 1
Query:   46 AYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLGAGCVKRKAHLFFKDRSEICHCKTNIMGAPGLN---FPPKGIITAPTKHF 657
            AYSP +VA++A+ L+L   R      +     +F L  + G +L            IG    K + GFGC++LAY+         + A YV L ELL  S I++LH PL AD++HLI  + +  M+ GA LINTGRG LVDT +L+ AL  G LG      ++ +    + D      C   ++  P L+     P  IIT  T ++
Sbjct:  102 AYSPDSVADYALMLMLMAIRGAKSTIHAVAQQNFRLDCVRGKELRDMTVGVIGTGHIGQAVVKRLRGFGCRVLAYD-----NSRKIEADYVQLDELLKNSDIVTLHVPLCADTRHLIGQRQIGEMKQGAFLINTGRGALVDTGSLVEALGSGKLGGAALDVLEGEDQFVYTD------CSQKVLDHPFLSQLLRMPNVIITPHTAYY 297          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: LDHD_TREPA (D-lactate dehydrogenase OS=Treponema pallidum GN=ldhD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.574e-23
Identity = 59/160 (36.88%), Postives = 89/160 (55.62%), Query Frame = 1
Query:   31 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPL 507
            +  VP+YSP+A+ E+A+A  L L R         R  DF     +   +L           +IG   A++  G G Q++ ++PYPN   +     YVS+ ELL  S +ISLH P T DS HLINA+++A M+ G  L+NT RG ++D+ AL+ +L +G +
Sbjct:   95 LTNVPSYSPNAIGEYALAAALQLTRHAREIETFVRKRDFRWQKPILSKELRCSRVGILGTGRIGQAAARLFKGVGAQVVGFDPYPNDAAKEW-LTYVSMDELLSTSDVISLHMPATKDSHHLINAKTIAQMKDGVYLVNTARGAVIDSQALLDSLDKGKI 253          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: VANH_ENTFC (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecium GN=vanH PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.345e-21
Identity = 64/185 (34.59%), Postives = 93/185 (50.27%), Query Frame = 1
Query:    7 AANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLGAGCVKRKAHLFFKD 561
            AA     T+  V AYSP +VA++ + LIL   R +          DF L    G  L           QIG    + + GFGC++LAY+     +  ++   YV   ELL  S I++LH PL  D+ ++I+ + +  M+ GA LINTGRG LVDT  L+ AL+ G LG      ++ +   F+ D
Sbjct:   89 AAKRMGITVDNV-AYSPDSVADYTMMLILMAVRNVKSIVRSVEKHDFRLDSDRGKVLSDMTVGVVGTGQIGKAVIERLRGFGCKVLAYS-----RSRSIEVNYVPFDELLQNSDIVTLHVPLNTDTHYIISHEQIQRMKQGAFLINTGRGPLVDTYELVKALENGKLGGAALDVLEGEEEFFYSD 267          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.369e-21
Identity = 58/166 (34.94%), Postives = 92/166 (55.42%), Query Frame = 1
Query:    7 AANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYPNPQVEA-LGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEG 501
            AA A    +V  P  + H+ AEHA+AL+LA +R++  A    R+  +     +G ++           +IG   A+ +A FG  ++AY+PY +P   A LG   +SL +LL  +  IS+H P T ++  LI+ ++LA  +PG +++N  RGGLVD  AL  A+  G
Sbjct:   83 AATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGG 248          
The following BLAST results are available for this feature:
BLAST of EY674798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
DDH_HAEIN4.635e-4747.622-hydroxyacid dehydrogenase homolog OS=Haemophilus... [more]
LDHD_ECOLI1.947e-4547.09D-lactate dehydrogenase OS=Escherichia coli (strai... [more]
DDH1_SCHPO8.467e-4144.212-hydroxyacid dehydrogenase homolog 1 OS=Schizosac... [more]
DDH_ZYMMO2.724e-3944.272-hydroxyacid dehydrogenase homolog OS=Zymomonas m... [more]
DDH2_SCHPO2.306e-3841.582-hydroxyacid dehydrogenase homolog 2 OS=Schizosac... [more]
LDHD_DICDI4.212e-3236.13Putative D-lactate dehydrogenase OS=Dictyostelium ... [more]
VANH_ENTFA3.574e-2334.30D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
LDHD_TREPA3.574e-2336.88D-lactate dehydrogenase OS=Treponema pallidum GN=l... [more]
VANH_ENTFC3.345e-2134.59D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
SERA_MYCTU4.369e-2134.94D-3-phosphoglycerate dehydrogenase OS=Mycobacteriu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-E12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674798 ID=EY674798; Name=EY674798; organism=Citrus sinensis; type=EST; length=1032bp
CTGCCCGCCGCCAACGCCTGGGCCTGCACTATCGTGCGGGTGCCGGCCTA
TTCGCCCCATGCGGTGGCCGAACATGCGGTCGCACTGATCCTGGCCCTCA
ATCGCCGCCTGCACCGCGCCTACAACCGTACCCGCGACGGTGACTTCAGC
CTGCATGGCCTGACCGGTTTCGACCTGGTGGGCAAGACCGTCGGCGTGGT
CGGCACCGGGCAGATCGGCGCCACATTCGCCAAGATCATGGCCGGGTTCG
GCTGCCAGTTGCTGGCGTACAATCCTTACCCCAACCCGCAGGTCGAGGCC
CTCGGTGCGCGCTATGTGAGCCTGCATGAGTTGCTGGGCGAGTCGCAGAT
CATCAGCCTGCATTGCCCGCTGACGGCGGACAGCAAACACCTGATCAACG
CCCAAAGCCTGGCCCATATGCAGCCCGGCGCGATGCTGATCAATACCGGG
CGCGGGGGCCTGGTGGACACCCCGGCGCTGATCCACGCACTCAAGGAAGG
GCCACTCGGCTATCTGGGGGCTGGATGTGTAAAAAGAAAAGCCCACCTGT
TTTTCAAAGACCGCTCCGAAATTTGCCATTGCAAAACAAACATAATGGGC
GCGCCTGGCTTGAACTTTCCCCCCAAAGGAATTATCACCGCCCCCACCAA
GCATTTCCTGAAACCCCAAGGCCCCTGGGGGGCAATATTGGCGGGCACTA
CCCCTGGCCAAAAATCCCCGGCGGTGGGGTAGGGGGGGGCTAGGGCACAA
AAACCCCCGACAAAAGGAAAAAACAACCCGGTATCCATAAAACCCCCCGC
CCAAGAAAAAGAGGGGGGGCCCCCCCGAAAATTAGGAAAGCCACCACCCC
CCATTTTTGGAAAGAATACCCCAATGGGTAAAAAAAACCCAAAATTTTTC
CCCCCCATTCAACATATTTTGGAATAAGACCCCCAACAAGAAATAAAATC
ACCCAACAGGAATATAAAAAAAATAGCGCTGCTCAGCCACACCAAATGAG
TGAGGGGCGCGTAGGGGGAGTGCACGGGCCTA
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