EY655182

Overview
NameEY655182
Unique NameEY655182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY655182 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 8.325e-35
Identity = 73/143 (51.05%), Postives = 97/143 (67.83%), Query Frame = 3
Query:  291 DPPFHQAYKSLI--------EDTSNNIFGKKLV-LVEECELPLIDLSRILHNDNVVDQSEREECYEEIARASQQWGFFQVTNHGISQDLLEKMIEEQVKVFQQPCDKISKEDKVMNLPAGSYCWGTPTATCLNQLSWSAAFHI 692
            DPPF++ Y +L+         D S   F   +  +VEE ELP+ID+SR++       + ERE+C E IARAS++WGFFQV NHGIS D+LEKM +EQ++VF++P DK SK +K     AGSY WGTP+AT + QLSWS AFH+
Sbjct:    2 DPPFNEIYNNLLYNQITKKDNDVSEIPFSFSVTAVVEEVELPVIDVSRLIDGA----EEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEK---FSAGSYRWGTPSATSIRQLSWSEAFHV 137          

HSP 2 Score: 30.8018 bits (68), Expect = 8.325e-35
Identity = 22/59 (37.29%), Postives = 31/59 (52.54%), Query Frame = 1
Query:  724 FTTLSSTLEQFATTVAGLGPKVTAILAE-N*VASYVIPGNCLLSHANLK-*PIPTCPVP 894
            FTTLSST+E+FA+    L   +  +LAE +   S     NC+ +   L+    P CP P
Sbjct:  148 FTTLSSTMEKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKP 206          
BLAST of EY655182 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.438e-18
Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  282 MATDPPFHQAYKSLI-----EDTSNNIFGKKLVLVEECELPLIDLSRILHNDNVVDQSEREECYEEIARASQQWGFFQVTNHGISQDLLEKMIEEQVKVFQQPCDKISKEDKVMNLPAGSYCWGTPTATCLNQLSWSAAFHIL 695
            MA+ PPF   + S+        TS +      +     +LP+IDLS +   + V    +R+ C +++  A+++WGFFQ+ NHGI +D+ E M+ E+ K+F QP   +   ++  +L   SY WG P+AT   Q S S AFHI+
Sbjct:    1 MASQPPFKTNFCSIFGSSFPNSTSESNTNTSTIQTSGIKLPVIDLSHLTSGEEV----KRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPF-SVKVRERFSDLSKNSYRWGNPSATSPAQYSVSEAFHII 138          
The following BLAST results are available for this feature:
BLAST of EY655182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
G2OX8_ARATH8.325e-3551.05Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
G2OX7_ARATH2.438e-1834.97Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-071-G03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY655182 ID=EY655182; Name=EY655182; organism=Citrus sinensis; type=EST; length=975bp
TTCTCGACCCACGCGTCCGCGTGGCCTTAATTATCGATTACTGTAGAGTA
AAGAAATAAATACAAAGATTATTGAGTTGAGCTCTTTTTTTCTTTTTTTT
TGTTGGTGTGGGGGGGAGTCATGAGTGATATTAGGTTGTCATTTTCATGT
TCCCTACAGCTAAACTGCAGAATTGGTTCTTACCAGCAGAAGTCTTGCAT
GAAGTGATGCATCCCTCATTCAAGAAAGTACAAATGCTGGAGTCTGACAA
CTTCATCACAGAATTAAACCATCCACTAAACATGGCCACGGACCCACCAT
TTCACCAAGCTTACAAGTCCCTCATCGAAGATACCTCAAACAATATCTTT
GGCAAGAAGCTTGTACTTGTTGAGGAATGTGAACTTCCGCTGATTGATCT
TAGCCGAATACTTCATAATGATAACGTCGTCGACCAATCTGAAAGAGAAG
AGTGCTACGAGGAGATAGCTAGGGCTTCTCAGCAATGGGGTTTTTTCCAA
GTTACTAATCATGGGATATCACAAGATTTACTGGAGAAGATGATAGAAGA
GCAAGTGAAAGTTTTCCAGCAGCCTTGTGATAAGATAAGCAAAGAAGACA
AGGTCATGAATCTCCCAGCTGGCAGTTACTGCTGGGGAACACCAACGGCC
ACATGTCTCAACCAGTTATCGTGGTCCGCAGCTTTTCACATCCTATGGCC
GATATATCTGCATCTGCTGCTGCTTCACTACTCTCAGTTCAACTCTGGAA
CAGTTTGCTACGACAGTGGCTGGTCTTGGCCCCAAAGTAACTGCCATCCT
GGCGGAGAATTAAGTCGCGAGCTACGTAATTCCAGGAAATTGCTTGCTCA
GCCATGCTAACTTAAAATGACCGATACCCACATGCCCTGTTCCTAGGCGA
AACCGGGTTGATGTCGCACCCGACGTGACTTCTCCAAATTGGACAAAATG
AGGTGAGGCTTGCACTATCAAGATG
back to top