EY655048

Overview
NameEY655048
Unique NameEY655048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY655048 vs. ExPASy Swiss-Prot
Match: CYP37_ARATH (Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic OS=Arabidopsis thaliana GN=CYP37 PE=1 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 6.750e-63
Identity = 139/261 (53.26%), Postives = 172/261 (65.90%), Query Frame = 3 
Query:   66 SSPILPHKLSFSFSAAPKRSFLSSQFTFPLNRNEATRFGHFKIHCKRTNIND-TREPVHQHDLPTKLFISTFQHGMKTVKTLIATILIFVQISTPLCLVGWDFWSVFPANAVLYSPDTKVPRTGELALRRAIPANANMKAIQASLEDISFLLRIPQRKPYGTMEGNVKKALKIAMDEKDSILASIPADLKGKGSTLYASLIDGKGGLQALSKCIKDQDPHKYLVALHLPWIQVQNWSGYKLLGILF-CGRAYKKYPRVQGK 842
            SS ++ H+L F   +   R FL  +   P NR   T  G F++    T+    T+E +H  +      ++TF+ G K ++ L+ATILIFVQ+ +PL L G D   + PA AVLYSPDTKVPRTGELALRRAIPAN +MK IQASLEDIS+LLRIPQRKPYGTME NVKKALK+A+D+KD ILASIP DLK KGS LY +LIDGKGGLQAL   IK QDP K  + L      V +    +  G+ F   + Y  YPR+ G+
Sbjct:    7 SSTVVSHRLFFLHPSPLNRKFLFVKPKLPFNR---TNSGDFRMRLHSTSSKTGTKELIHSCNSSIDSKLNTFEAGSKNLEKLVATILIFVQVWSPLPLFGLDSAYISPAEAVLYSPDTKVPRTGELALRRAIPANPSMKIIQASLEDISYLLRIPQRKPYGTMESNVKKALKVAIDDKDKILASIPVDLKDKGSELYTTLIDGKGGLQALITSIKKQDPDKVSLGLAASLDTVADLELLQASGLSFLLPQQYLNYPRLAGR 264
The following BLAST results are available for this feature:
BLAST of EY655048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CYP37_ARATH6.750e-6353.26Peptidyl-prolyl cis-trans isomerase CYP37, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-070-C05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY655048 ID=EY655048; Name=EY655048; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGCCCACGCGTCCGAGCAAGTACCAACCTTCCTTTCCTTTC
ATGGCCTTCACTTTATCCTCTCCCATTCTCCCTCACAAGCTCTCTTTCAG
TTTCTCCGCCGCTCCAAAGCGCTCTTTTCTCTCATCCCAGTTCACATTTC
CACTCAACAGGAATGAAGCTACAAGATTTGGCCATTTCAAGATTCACTGC
AAGCGTACAAACATTAATGATACAAGGGAACCAGTGCACCAGCATGATCT
TCCTACCAAATTATTCATATCAACTTTTCAACATGGAATGAAAACAGTAA
AGACTTTGATTGCAACAATTCTTATTTTTGTCCAAATTTCTACTCCACTA
TGCTTGGTTGGCTGGGACTTTTGGTCAGTTTTCCCCGCAAATGCAGTGCT
TTATTCTCCTGACACAAAGGTCCCAAGAACTGGAGAACTTGCTTTGAGAA
GGGCTATCCCTGCAAATGCAAACATGAAGGCAATACAGGCTTCTTTGGAG
GATATATCATTTTTGCTAAGGATTCCACAGAGAAAACCTTACGGAACCAT
GGAGGGTAATGTGAAGAAAGCACTAAAGATAGCAATGGACGAAAAGGACT
CTATACTGGCAAGTATTCCAGCGGATCTAAAGGGAAAGGGTTCTACACTG
TATGCATCTCTCATTGACGGGAAGGGTGGACTGCAAGCACTTTCTAAGTG
TATCAAGGATCAGGACCCACATAAATATCTGGTGGCCCTGCATCTTCCCT
GGATACAAGTGCAGAACTGGAGTGGCTACAAGCTCCTGGGTATCCTTTTT
TGTGGCAGAGCATACAAGAAATATCCGAGGGTACAGGGAAAGGATTGTCG
AACTACATTGGGAGGGGAATGGGTCTCTTTTTTCCCAACTGGTGGGACCA
GGAAACTGCCCAATCCGGGGTTCTAAGGAATTC
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