EY653264

Overview
NameEY653264
Unique NameEY653264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY653264 vs. ExPASy Swiss-Prot
Match: DGDG1_LOTJA (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus japonicus GN=DGD1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.105e-53
Identity = 79/96 (82.29%), Postives = 88/96 (91.67%), Query Frame = 2
Query:   14 LFLAAYLAKTEQQNVTLLVPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPVKDADICI 298
            LF AAYL+++E+Q VTLLVPWLCKSDQELVYP N+TF SPEEQE Y+RNWLEER+GFKADFKISFYPGKFS+ RRSIIPAGDT+QFIP KDADI I
Sbjct:  335 LFRAAYLSQSEKQKVTLLVPWLCKSDQELVYPSNLTFTSPEEQEGYIRNWLEERIGFKADFKISFYPGKFSQARRSIIPAGDTAQFIPSKDADIAI 430          

HSP 2 Score: 65.0846 bits (157), Expect = 7.105e-53
Identity = 35/60 (58.33%), Postives = 38/60 (63.33%), Query Frame = 3
Query:  273 PSKMLIFASLEEPEQLNWYHHGKRLTDKFTMVV-VVSTQLLGVYQREKNGLLHFSL*KHL 449
            PSK    A LEEPE LNWYHHG R TDKF  VV +V T  L   +REKNG L   L KH+
Sbjct:  422 PSKDADIAILEEPEHLNWYHHGTRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHI 481          
BLAST of EY653264 vs. ExPASy Swiss-Prot
Match: DGDG1_SOYBN (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Glycine max GN=DGD1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.006e-51
Identity = 77/96 (80.21%), Postives = 87/96 (90.62%), Query Frame = 2
Query:   14 LFLAAYLAKTEQQNVTLLVPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPVKDADICI 298
            LF AAYL+++ +Q VTLLVPWLCKSDQELVYP N+TF SPEEQE Y+R+WLEER+GFKADFKISFYPGKFS+ RRSIIPAGDTSQFIP +DADI I
Sbjct:  332 LFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPSNLTFTSPEEQEAYIRSWLEERIGFKADFKISFYPGKFSEARRSIIPAGDTSQFIPSRDADIAI 427          

HSP 2 Score: 66.2402 bits (160), Expect = 1.006e-51
Identity = 35/60 (58.33%), Postives = 39/60 (65.00%), Query Frame = 3
Query:  273 PSKMLIFASLEEPEQLNWYHHGKRLTDKFTMVV-VVSTQLLGVYQREKNGLLHFSL*KHL 449
            PS+    A LEEPE LNWYHHGKR TDKF  VV +V T  L   +REKNG L   L KH+
Sbjct:  419 PSRDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHI 478          
BLAST of EY653264 vs. ExPASy Swiss-Prot
Match: DGDG1_ARATH (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=DGD1 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.106e-50
Identity = 78/96 (81.25%), Postives = 86/96 (89.58%), Query Frame = 2
Query:   14 LFLAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPVKDADICI 298
            LF AAYLAK  +Q+VTL+VPWLC+SDQELVYPN +TF SPEEQE+Y+R WLEER+GFKADFKISFYPGKFSKERRSI PAGDTSQFI  KDADI I
Sbjct:  365 LFRAAYLAKAAKQSVTLVVPWLCESDQELVYPNNLTFSSPEEQESYIRKWLEERIGFKADFKISFYPGKFSKERRSIFPAGDTSQFISSKDADIAI 460          

HSP 2 Score: 58.5362 bits (140), Expect = 9.106e-50
Identity = 32/59 (54.24%), Postives = 36/59 (61.02%), Query Frame = 3
Query:  276 SKMLIFASLEEPEQLNWYHHGKRLTDKFTMVV-VVSTQLLGVYQREKNGLLHFSL*KHL 449
            SK    A LEEPE LNWY+HGKR TDKF  VV +V T  L   +REKNG L      H+
Sbjct:  453 SKDADIAILEEPEHLNWYYHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVNHV 511          
BLAST of EY653264 vs. ExPASy Swiss-Prot
Match: DGDG2_ARATH (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=DGD2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.217e-32
Identity = 55/96 (57.29%), Postives = 71/96 (73.96%), Query Frame = 2
Query:   14 LFLAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPVKDADICI 298
            LF AAYLA   ++ VTL++PWL    Q+LVYPN +TF SP EQE Y+R WLEERV F+  F+I FYPGKF+ ++RSI+P GD S  IP ++ADI +
Sbjct:   28 LFRAAYLANDGERRVTLVIPWLTLKHQKLVYPNSITFSSPSEQEAYVRQWLEERVSFRLAFEIRFYPGKFAIDKRSILPVGDISDAIPDEEADIAV 123          

HSP 2 Score: 45.8246 bits (107), Expect = 1.217e-32
Identity = 24/60 (40.00%), Postives = 33/60 (55.00%), Query Frame = 3
Query:  273 PSKMLIFASLEEPEQLNWYHHGKRLTDKFTMVV-VVSTQLLGVYQREKNGLLHFSL*KHL 449
            P +    A LEEPE L W+HHG++   KF  V+ +V T  L   +REK G +     K+L
Sbjct:  115 PDEEADIAVLEEPEHLTWFHHGQKWKTKFNYVIGIVHTNYLEYVKREKQGRVKAFFLKYL 174          
BLAST of EY653264 vs. ExPASy Swiss-Prot
Match: DGDG2_LOTJA (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Lotus japonicus GN=DGD2 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.597e-27
Identity = 57/96 (59.38%), Postives = 73/96 (76.04%), Query Frame = 2
Query:   14 LFLAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPVKDADICI 298
            LF AAYL+K  +++VTL++PWL   DQ LVYPN +TF SP E E Y+R WLEERVGF + F I FYPGKFS+++RSI+  GD S+ IP K+ADI +
Sbjct:   26 LFRAAYLSKDGERDVTLVIPWLSLKDQALVYPNNITFASPSEHEKYIRQWLEERVGFTSGFSIKFYPGKFSRDKRSILAVGDISEVIPDKEADIAV 121          
BLAST of EY653264 vs. ExPASy Swiss-Prot
Match: DGDG2_SOYBN (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Glycine max GN=DGD2 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.926e-27
Identity = 57/96 (59.38%), Postives = 72/96 (75.00%), Query Frame = 2
Query:   14 LFLAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPVKDADICI 298
            LF AAYLAK+ +++VTL++PWL   DQ LVYPN +TF SP E E Y+  WLEERVGF + F I FYPGKFS+++RSI+  GD S+ IP K ADI +
Sbjct:   26 LFRAAYLAKSGERDVTLVIPWLSLKDQRLVYPNNITFASPSEHEKYICQWLEERVGFTSGFSIQFYPGKFSRDKRSILAVGDISEIIPDKVADIAV 121          
The following BLAST results are available for this feature:
BLAST of EY653264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DGDG1_LOTJA7.105e-5382.29Digalactosyldiacylglycerol synthase 1, chloroplast... [more]
DGDG1_SOYBN1.006e-5180.21Digalactosyldiacylglycerol synthase 1, chloroplast... [more]
DGDG1_ARATH9.106e-5081.25Digalactosyldiacylglycerol synthase 1, chloroplast... [more]
DGDG2_ARATH1.217e-3257.29Digalactosyldiacylglycerol synthase 2, chloroplast... [more]
DGDG2_LOTJA1.597e-2759.38Digalactosyldiacylglycerol synthase 2, chloroplast... [more]
DGDG2_SOYBN7.926e-2759.38Digalactosyldiacylglycerol synthase 2, chloroplast... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-042-D08-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY653264 ID=EY653264; Name=EY653264; organism=Citrus sinensis; type=EST; length=793bp
CCACGCGTCCGCACTTTTTCTAGCAGCTTATTTAGCAAAGACTGAACAAC
AAAATGTTACACTTTTGGTTCCCTGGCTTTGTAAGTCGGACCAAGAATTA
GTTTATCCTAATGTCACTTTTTGTTCGCCAGAAGAGCAGGAAAACTACAT
GCGTAATTGGCTCGAGGAAAGGGTTGGCTTTAAGGCAGATTTTAAAATCT
CCTTTTATCCTGGAAAGTTCTCNAAAGAAAGACGTAGTATAATACCTGCT
GGAGATACTTCTCAGTTTATTCCCGTCAAAGATGCTGATATTTGCATCCC
TAGAAGAACCAGAGCAACTGAATTGGTACCATCATGGTAAGCGCTTGACT
GATAAATTCACCATGGTGGTTGTGGTGTCCACACAATTACTTGGAGTATA
TCAGAGGGAAAAAAATGGGCTCCTGCACTTTTCTTTGTGAAAACATTTAC
AATTGGGCACTATAGATACTGTGGCAAGGTCTTCGCTTTCACTGGCCTCT
AGAGTTTCAAAACTGTGATTTGAAAGGCCCGTGGGAAACCCAAATTTTGC
CATGGTGAGAAGGTGCTCCATAGGGACAAGGGGGCAAACCTCTCCAAAGG
GCCATTTCTGGGGAGAAGGGTTGGGAAAGGGTCAGGGGTTTTAAATTTTT
GGGAACACACAAAGTCTTGAGGGGTCAAATGAAGTGTTTGGAAGGGAAGG
GCTTTTAGAACACAGAGGCTGAAAACAGGATTTGATCTCACTTCAAAAGA
AAGAATGCAATGATCCTCATGGTACAAGCTCTCATCTAAAATA
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