EY653262 | Citrus Genome Database

Overview


Name	EY653262
Unique Name	EY653262
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	929

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: KC1D_ARATH (Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.848e-22
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 2

Query:  593 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVP 790
            M+  +G KF+LGRKIGSGSFGE+YLG N+ T EE A+KLE+VKTKHPQL YESKLY +LQG  GVP
Sbjct:    1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIHTNEELAIKLENVKTKHPQLLYESKLYRILQGGTGVP 66

HSP 2 Score: 26.1794 bits (56), Expect = 1.848e-22
Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 3

Query:  813 G*YXVMVIDLLGPSWKIIY-YCTESFS 890
            G Y V+V+DLLGPS + ++ +C+   S
Sbjct:   75 GDYNVLVMDLLGPSLEDLFNFCSRKLS 101

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: KC1E_CHICK (Casein kinase I isoform epsilon OS=Gallus gallus GN=CSNK1E PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.975e-22
Identity = 43/66 (65.15%), Postives = 54/66 (81.82%), Query Frame = 2

Query:  593 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVP 790
            M+  +G K++LGRKIGSGSFG++YLG N+ TGEE A+KLE VKTKHPQLH ESK Y ++QG  G+P
Sbjct:    1 MELRVGNKYRLGRKIGSGSFGDIYLGANIATGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIP 66

HSP 2 Score: 28.1054 bits (61), Expect = 8.975e-22
Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 3

Query:  813 G*YXVMVIDLLGPSWKIIY-YCTESFS 890
            G Y VMV++LLGPS + ++ +C+  FS
Sbjct:   75 GDYNVMVMELLGPSLEDLFNFCSRKFS 101

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: KC1E_MOUSE (Casein kinase I isoform epsilon OS=Mus musculus GN=Csnk1e PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.570e-21
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 2

Query:  593 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVP 790
            M+  +G K++LGRKIGSGSFG++YLG N+ +GEE A+KLE VKTKHPQLH ESK Y ++QG  G+P
Sbjct:    1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIP 66

HSP 2 Score: 28.1054 bits (61), Expect = 2.570e-21
Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 3

Query:  813 G*YXVMVIDLLGPSWKIIY-YCTESFS 890
            G Y VMV++LLGPS + ++ +C+  FS
Sbjct:   75 GDYNVMVMELLGPSLEDLFNFCSRKFS 101

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: KC1E_HUMAN (Casein kinase I isoform epsilon OS=Homo sapiens GN=CSNK1E PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.570e-21
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 2

Query:  593 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVP 790
            M+  +G K++LGRKIGSGSFG++YLG N+ +GEE A+KLE VKTKHPQLH ESK Y ++QG  G+P
Sbjct:    1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIP 66

HSP 2 Score: 28.1054 bits (61), Expect = 2.570e-21
Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 3

Query:  813 G*YXVMVIDLLGPSWKIIY-YCTESFS 890
            G Y VMV++LLGPS + ++ +C+  FS
Sbjct:   75 GDYNVMVMELLGPSLEDLFNFCSRKFS 101

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: KC1_TOXGO (Casein kinase I OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.585e-21
Identity = 43/67 (64.18%), Postives = 57/67 (85.07%), Query Frame = 2

Query:  593 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVPI 793
            M+  +GGK++LGRKIGSGSFG++Y+G N+ TG+E A+KLES+K+KHPQL YESKLY LL G  G+P+
Sbjct:    1 MEVRVGGKYRLGRKIGSGSFGDIYIGANILTGDEVAIKLESIKSKHPQLLYESKLYKLLAGGIGIPM 67

HSP 2 Score: 26.5646 bits (57), Expect = 2.585e-21
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 3

Query:  813 G*YXVMVIDLLGPSWKIIY 869
            G Y VMVIDLLGPS + ++
Sbjct:   75 GDYNVMVIDLLGPSLEDLF 93

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: KC1DA_DANRE (Casein kinase I isoform delta-A OS=Danio rerio GN=csnk1da PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.353e-21
Identity = 41/66 (62.12%), Postives = 55/66 (83.33%), Query Frame = 2

Query:  593 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVP 790
            M+  +G +++LGRKIGSGSFG++YLG ++ TGEE A+KLE VKTKHPQLH ESK+Y ++QG  G+P
Sbjct:    1 MELRVGNRYRLGRKIGSGSFGDIYLGTDITTGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIP 66

HSP 2 Score: 28.1054 bits (61), Expect = 4.353e-21
Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 3

Query:  813 G*YXVMVIDLLGPSWKIIY-YCTESFS 890
            G Y VMV++LLGPS + ++ +C+  FS
Sbjct:   75 GDYNVMVMELLGPSLEDLFNFCSRKFS 101

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: KIN20_CAEEL (Casein kinase I isoform delta OS=Caenorhabditis elegans GN=kin-20 PE=2 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 9.539e-21
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 2

Query:  581 KSRSMDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVP 790
            K   M+  +G +F+LGRKIGSGSFG++YLG N+QT EE AVKLE VK+KHPQLH ES+LY ++ G  G+P
Sbjct:  179 KKAEMELRVGNRFRLGRKIGSGSFGDIYLGQNIQTNEEVAVKLECVKSKHPQLHIESRLYRIMLGGIGIP 248

HSP 2 Score: 27.335 bits (59), Expect = 9.539e-21
Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 3

Query:  813 G*YXVMVIDLLGPSWKIIY-YCTESFS 890
            G Y VMV++LLGPS + ++ +C   FS
Sbjct:  257 GDYNVMVMELLGPSLEDLFNFCQRKFS 283

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: DCO_DROME (Discs overgrown protein kinase OS=Drosophila melanogaster GN=dco PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 9.563e-21
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 2

Query:  593 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVPIXNGLXWRVIXC 826
            M+  +G K++LGRKIGSGSFG++YLG  + TGEE A+KLE ++TKHPQLH ESK Y  +QG  G+P       R+I C
Sbjct:    1 MELRVGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLHIESKFYKTMQGGIGIP-------RIIWC 71

HSP 2 Score: 28.4906 bits (62), Expect = 9.563e-21
Identity = 14/29 (48.28%), Postives = 21/29 (72.41%), Query Frame = 3

Query:  807 SGG*YXVMVIDLLGPSWKIIY-YCTESFS 890
            S G Y VMV++LLGPS + ++ +C+  FS
Sbjct:   73 SEGDYNVMVMELLGPSLEDLFNFCSRRFS 101

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: KC1_EIMTE (Casein kinase I OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.620e-21
Identity = 43/66 (65.15%), Postives = 56/66 (84.85%), Query Frame = 2

Query:  593 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVP 790
            MD  +GGK++LGRKIGSGSFG++YLG N+ TG+E A+KLESV+++HPQL YESKLY +L G  G+P
Sbjct:    1 MDVRVGGKYRLGRKIGSGSFGDIYLGTNISTGDEVAIKLESVRSRHPQLIYESKLYKILTGGIGIP 66

HSP 2 Score: 24.6386 bits (52), Expect = 9.620e-21
Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 3

Query:  813 G*YXVMVIDLLGPSWKIIY 869
            G Y VM+I+LLGPS + ++
Sbjct:   75 GDYNVMIIELLGPSLEDLF 93

[Close]

BLAST of EY653262 vs. ExPASy Swiss-Prot
Match: KC1DB_DANRE (Casein kinase I isoform delta-B OS=Danio rerio GN=csnk1db PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.246e-20
Identity = 40/66 (60.61%), Postives = 54/66 (81.82%), Query Frame = 2

Query:  593 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQTGEESAVKLESVKTKHPQLHYESKLYMLLQGRNGVP 790
            M+  +G +++LGRKIGSGSFG++YLG ++  GEE A+KLE VKTKHPQLH ESK+Y ++QG  G+P
Sbjct:    1 MELRVGNRYRLGRKIGSGSFGDIYLGTDISVGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIP 66

HSP 2 Score: 28.1054 bits (61), Expect = 1.246e-20
Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 3

Query:  813 G*YXVMVIDLLGPSWKIIY-YCTESFS 890
            G Y VMV++LLGPS + ++ +C+  FS
Sbjct:   75 GDYNVMVMELLGPSLEDLFNFCSRKFS 101

The following BLAST results are available for this feature:

BLAST of EY653262 vs. ExPASy Swiss-Prot

BLAST of EY653262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37


Match Name	E-value	Identity	Description
KC1D_ARATH	1.848e-22	71.21	Casein kinase I isoform delta-like OS=Arabidopsis ...	[more]
KC1E_CHICK	8.975e-22	65.15	Casein kinase I isoform epsilon OS=Gallus gallus G...	[more]
KC1E_MOUSE	2.570e-21	63.64	Casein kinase I isoform epsilon OS=Mus musculus GN...	[more]
KC1E_HUMAN	2.570e-21	63.64	Casein kinase I isoform epsilon OS=Homo sapiens GN...	[more]
KC1_TOXGO	2.585e-21	64.18	Casein kinase I OS=Toxoplasma gondii PE=2 SV=1	[more]
KC1DA_DANRE	4.353e-21	62.12	Casein kinase I isoform delta-A OS=Danio rerio GN=...	[more]
KIN20_CAEEL	9.539e-21	61.43	Casein kinase I isoform delta OS=Caenorhabditis el...	[more]
DCO_DROME	9.563e-21	55.13	Discs overgrown protein kinase OS=Drosophila melan...	[more]
KC1_EIMTE	9.620e-21	65.15	Casein kinase I OS=Eimeria tenella PE=2 SV=1	[more]
KC1DB_DANRE	1.246e-20	60.61	Casein kinase I isoform delta-B OS=Danio rerio GN=...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-042-D06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY653262 ID=EY653262; Name=EY653262; organism=Citrus sinensis; type=EST; length=929bp
TTCGTCGACCCACGCGTCCGCTTTCCCTTTATTTTCTCTCTCTCTCCTTC
ATTCTTTTCTCATAAAATTTCCCGAGAAAATTCAAGCTGTTTTCTCAAAC
TCAATCCTTGTCTGCAACTCAGATCCGATTCTCCTCCCCGAATTCTTGCC
TCAAGTTTCGCCTGCTTAGATTCTTTTCGCTCTGTATTTTTCCCTCTGAA
AGAATTAATTTAAGGAAAAAAAAACACCATTTCTAACCATTATTTTCTCT
TCAAAATCCCACCTTTTTTCTCTTCAAAATTTTCCCAGAAAATGCATTAT
TGTGATCGCTCAACAATGTTAACAAATGGGTATTGCTTGGTTTTTTAAGC
AAACTCATGTTTTGTTTTGTATAGTAACAGATAGATTGTAAAGGCTAATT
TTTATTTTAAGTTGCATTGTTTTTTTGGTTTATCAATAAATTTGATGGAT
CTAAAGATTCTCTGACAAGGGAATCTTTTGTGGGTAGTTTCATGTTTGGT
GAACAAATTTGATTGTAATATAATTAATAGTGGAAAGAAAAAAAGTCCAA
ATTTGTTGTATTAAATTTTTTGTTCGGGTCAAAAGTAGATCCATGGATCA
TGTAATTGGAGGCAAGTTCAAGCTGGGGAGGAAGATCGGGAGTGGATCGT
TTGGTGAGCTTTATTTAGGGGTTAATGTGCAAACTGGCGAGGAAAGTGCT
GTGAAGCTGGAATCTGTGAAGACGAAGCATCCTCAGCTTCATTATGAATC
AAAATTGTACATGCTTCTTCAGGGGAGAAACGGTGTCCCCATCTNCAATG
GNTTGNAGTGGAGGGTGATACNATGTCATGGTTATTGATCTTCTTGGACC
AAGCTGGAAGATTATTTATTACTGCACAGAAAGTTTCTCTGAAACAGTTT
AATGCTTGCGATCAATANTAACAGAGTGA