EY678854

Overview
NameEY678854
Unique NameEY678854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY678854 vs. ExPASy Swiss-Prot
Match: NXN_BOVIN (Nucleoredoxin OS=Bos taurus GN=NXN PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.696e-29
Identity = 59/140 (42.14%), Postives = 94/140 (67.14%), Query Frame = 2
Query:   74 LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGD-FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS-DGGVEIIREYGVEGYPFTVERIKEMKE 484
            L+RSNG  ++  SL+G  +G+YFSA WC PC+  T +L E Y ++   G  FE+IFVS D  +++FK YFS+MPWLAVP++D   R +L+ L+ + GIP L++LD  G+V++  G VE++ +    G+P+  + + E+ +
Sbjct:  178 LLRSNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQKFEIIFVSADRSEDSFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLNDEDCRGFPWHPKPVLELSD 317          

HSP 2 Score: 77.411 bits (189), Expect = 1.216e-13
Identity = 57/209 (27.27%), Postives = 94/209 (44.98%), Query Frame = 2
Query:   74 LIRSNGDQVKLDSLKGK----IGLYFSASWCGPCQRFTPILAEVYNELSRQGD----------------------FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVSKLEGKTIGLYF 619
            L+   G++V + SL  +    +GLYF  S   PC + +  LA  Y  L  +GD                       E++FVS D+D   ++ +   MPWLA+P+ +   + KL   +++  IP L+ LD  +GKV+   G+ +IR+   EG  F                  +  R V+       ++ S+G+ +  S LEG  +G+YF
Sbjct:   13 LVTGGGEEVDVHSLAARGISLLGLYFGCSLSAPCAQLSASLAAFYGRL--RGDAAAGPGPGPGAGASAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRISNIPSLIFLDATSGKVVCRNGLLVIRD-DPEGLEF--------------PWGPKPFREVIAGP----LLRSNGQSLESSSLEGSHVGVYF 200          
BLAST of EY678854 vs. ExPASy Swiss-Prot
Match: NXN_MOUSE (Nucleoredoxin OS=Mus musculus GN=Nxn PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.338e-28
Identity = 58/140 (41.43%), Postives = 94/140 (67.14%), Query Frame = 2
Query:   74 LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS-DGGVEIIREYGVEGYPFTVERIKEMKE 484
            L+R+NG  ++  SL+G  +G+YFSA WC PC+  T +L E Y ++   G +FE+IFVS D  +E+FK YFS+MPWLAVP++D   R +L+ L+ + GIP L++LD  G+V++  G VE++ +     +P+  + + E+ +
Sbjct:  178 LLRNNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLELSD 317          

HSP 2 Score: 77.0258 bits (188), Expect = 1.588e-13
Identity = 58/211 (27.49%), Postives = 94/211 (44.55%), Query Frame = 2
Query:   68 DFLIRSNGDQVKLDSLKGK----IGLYFSASWCGPCQRFTPILAEVYNELSRQGD----------------------FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVSKLEGKTIGLYF 619
            D L+   G++V + SL  +    +GLYF  S   PC + +  LA  Y  L  +GD                       E++FVS D+D   ++ +   MPWLA+P+ +   + KL   ++V  IP L+ LD   GKV+   G+ +IR+   EG  F                  +  R V+       ++ ++G+ +  S LEG  +G+YF
Sbjct:   11 DKLVTGGGEEVDVHSLGARGIALLGLYFGCSLSAPCAQLSASLAAFYGRL--RGDAAAGPGAGAGAGAAAEPEPRHRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDATTGKVVCRNGLLVIRD-DPEGLEF--------------PWGPKPFREVIAGP----LLRNNGQSLESSSLEGSHVGVYF 200          
BLAST of EY678854 vs. ExPASy Swiss-Prot
Match: NXN_XENLA (Nucleoredoxin OS=Xenopus laevis GN=nxn PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.282e-28
Identity = 59/140 (42.14%), Postives = 93/140 (66.43%), Query Frame = 2
Query:   74 LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGD-FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS-DGGVEIIREYGVEGYPFTVERIKEMKE 484
            LIR+N    +  +L+G  +G+YFSA WC PC+  T +L E Y ++   G  FE++ VS D  +E+FK YFS+MPWLAVP+SD   R +L+ L+ + GIP+L+ILD  G+V++  G VE++R+   + +P+  + + E+ E
Sbjct:  157 LIRNNSQSQESSTLEGSYVGIYFSAYWCPPCRSLTRVLVESYRKIKESGQKFEIVLVSADRSEESFKQYFSEMPWLAVPYSDEARRSRLNRLYGIQGIPNLIILDPKGEVITRQGRVEVLRDIDCKEFPWHPKPVVELTE 296          
BLAST of EY678854 vs. ExPASy Swiss-Prot
Match: NXN_HUMAN (Nucleoredoxin OS=Homo sapiens GN=NXN PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.980e-28
Identity = 58/140 (41.43%), Postives = 94/140 (67.14%), Query Frame = 2
Query:   74 LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQG-DFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS-DGGVEIIREYGVEGYPFTVERIKEMKE 484
            L+R+NG  ++  SL+G  +G+YFSA WC PC+  T +L E Y ++   G +FE+IFVS D  +E+FK YFS+MPWLAVP++D   R +L+ L+ + GIP L++LD  G+V++  G VE++ +     +P+  + + E+ +
Sbjct:  178 LLRNNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLELSD 317          

HSP 2 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 56/209 (26.79%), Postives = 93/209 (44.50%), Query Frame = 2
Query:   74 LIRSNGDQVKLDSLKGK----IGLYFSASWCGPCQRFTPILAEVYNELSRQGD----------------------FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVSKLEGKTIGLYF 619
            L+   G++V + SL  +    +GLYF  S   PC + +  LA  Y  L  +GD                       E++FVS D+D   ++ +   MPWLA+P+ +   + KL   +++  IP L+ LD   GKV+   G+ +IR+   EG  F                  +  R V+       ++ ++G+ +  S LEG  +G+YF
Sbjct:   13 LVTGGGEEVDVHSLGARGISLLGLYFGCSLSAPCAQLSASLAAFYGRL--RGDAAAGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRISNIPSLIFLDATTGKVVCRNGLLVIRD-DPEGLEF--------------PWGPKPFREVIAGP----LLRNNGQSLESSSLEGSHVGVYF 200          
BLAST of EY678854 vs. ExPASy Swiss-Prot
Match: NXN_DANRE (Nucleoredoxin OS=Danio rerio GN=nxn PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.261e-25
Identity = 56/140 (40.00%), Postives = 87/140 (62.14%), Query Frame = 2
Query:   74 LIRSNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGD-FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLS-DGGVEIIREYGVEGYPFTVERIKEMKE 484
            L+R+N       +L+G  +G+YFSA WC PC+  T +L E Y ++   G  FE++FVS D  +E+F  YFS+MPWLAVP+SD   R +L+ L+ + GIP L++LD  G +++  G VEI+ +     +P+    + E+ E
Sbjct:  161 LLRNNRQTTDSTALEGSYVGVYFSAHWCPPCRSLTRVLVESYRKVKETGQKFEIVFVSADRSEESFTQYFSEMPWLAVPYSDEARRSRLNRLYGIQGIPTLILLDTEGHMITRQGRVEILNDPDCGLFPWHPRPVLELSE 300          

HSP 2 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 41/125 (32.80%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   86 NGDQVKLD-----SLKGKIGLYFSASWCGPCQRFTPILAEVYNELSRQGD----FEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILD-ENGKVLSDGGVEIIRE 430
            NG++ ++D     S    +GLYF  S  GPC++F   L E Y++  +  +     E++F+S D+D + ++ +  +M W A+PF D   + KL   +KV  IP LV +D   GKV+   G+ ++R+
Sbjct:   15 NGEKAEVDVQALGSRLSLLGLYFGCSLNGPCKQFNASLTEFYSKFKKSSEHKDKLEIVFISSDQDQKQWQDFLQEMQWPALPFKDRHKKMKLWNKYKVTSIPSLVFIDAATGKVVCRNGLLVVRD 139          
BLAST of EY678854 vs. ExPASy Swiss-Prot
Match: TYPX_TRYBB (Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.936e-19
Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 2
Query:   83 SNGDQVKLDSLKGK-IGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILD 382
            S   +V L SL GK + LYFSASWC PC+ FTP+LAE Y +     +FEV+ +S DE++  F  Y+ KMPWLA+PF    T  +L + F V  IP L+ ++
Sbjct:   16 SKSGEVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITIN 116          
BLAST of EY678854 vs. ExPASy Swiss-Prot
Match: NXNL2_MOUSE (Nucleoredoxin-like protein 2 OS=Mus musculus GN=Nxnl2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.308e-14
Identity = 49/138 (35.51%), Postives = 78/138 (56.52%), Query Frame = 2
Query:   74 LIRSNGDQVKLD-SLKGKI-GLYFSASWCGPCQRFTPILAEVYNEL----SRQGDFEVIFVSGDEDDEAFKGYFSKM--PWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVE 463
            L+   G  V+ + +L+ K+  LYF+A  C P + FTP+L + Y EL     R   FEV+FVS D   E    +  ++   WLA+PF D   R +L + +++  IP LV++ +NG V+++ G + IRE G+  +   VE
Sbjct:   10 LVTREGTVVEAEVALQNKVVALYFAAGRCSPSRDFTPLLCDFYTELVSEARRPAPFEVVFVSADGSAEEMLDFMRELHGSWLALPFHD-PYRHELKKRYEITAIPKLVVIKQNGAVITNKGRKQIRERGLACFQNWVE 146          
BLAST of EY678854 vs. ExPASy Swiss-Prot
Match: NXNL2_HUMAN (Nucleoredoxin-like protein 2 OS=Homo sapiens GN=NXNL2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.708e-13
Identity = 49/138 (35.51%), Postives = 78/138 (56.52%), Query Frame = 2
Query:   74 LIRSNGDQVKLDS-LKGKI-GLYFSASWCGPCQRFTPILAEVYN----ELSRQGDFEVIFVSGDEDDEAFKGYFSKM--PWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVE 463
            L+   G  V+ ++ L+ K+  LYF+A+ C P + FTP+L + Y     E  R   FEV+FVS D   +    +  ++   WLA+PF D   R +L + + V  IP LVI+ +NG+V+++ G + IRE G+  +   VE
Sbjct:   10 LVTCKGATVEAEAALQNKVVALYFAAARCAPSRDFTPLLCDFYTALVAEARRPAPFEVVFVSADGSSQEMLDFMRELHGAWLALPFHDPY-RHELRKRYNVTAIPKLVIVKQNGEVITNKGRKQIRERGLACFQDWVE 146          
The following BLAST results are available for this feature:
BLAST of EY678854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
NXN_BOVIN2.696e-2942.14Nucleoredoxin OS=Bos taurus GN=NXN PE=2 SV=1[more]
NXN_MOUSE1.338e-2841.43Nucleoredoxin OS=Mus musculus GN=Nxn PE=1 SV=1[more]
NXN_XENLA2.282e-2842.14Nucleoredoxin OS=Xenopus laevis GN=nxn PE=2 SV=1[more]
NXN_HUMAN2.980e-2841.43Nucleoredoxin OS=Homo sapiens GN=NXN PE=1 SV=2[more]
NXN_DANRE5.261e-2540.00Nucleoredoxin OS=Danio rerio GN=nxn PE=2 SV=1[more]
TYPX_TRYBB1.936e-1946.53Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=... [more]
NXNL2_MOUSE9.308e-1435.51Nucleoredoxin-like protein 2 OS=Mus musculus GN=Nx... [more]
NXNL2_HUMAN2.708e-1335.51Nucleoredoxin-like protein 2 OS=Homo sapiens GN=NX... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-030-B08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY678854 ID=EY678854; Name=EY678854; organism=Citrus sinensis; type=EST; length=893bp
AAAAGAAATGAACATGAACGGAGCAAATTCTCACGACATTCAATCCCTCC
TCTCTTCTTCGGCGAGGGATTTTCTAATTCGCAGCAACGGTGATCAGGTT
AAACTTGACAGCTTGAAGGGAAAGATTGGGCTGTATTTTTCAGCATCATG
GTGTGGCCCATGTCAGCGATTCACACCAATTTTAGCGGAGGTGTATAATG
AACTCTCTCGCCAAGGTGATTTTGAGGTCATTTTTGTCTCAGGCGATGAA
GATGATGAGGCATTTAAGGGCTACTTCTCGAAGATGCCGTGGCTTGCAGT
TCCATTTTCTGATTCTGAGACACGTGATAAGTTGGATGAGTTGTTTAAGG
TGATGGGAATTCCTCACCTTGTGATTCTGGATGAAAATGGAAAAGTTTTA
AGTGATGGTGGAGTTGAAATCATTCGAGAGTATGGAGTTGAAGGGTACCC
TTTTACCGTAGAAAGGATCAAAGAAATGAAGGAGCAAGAAGAAAGAGCCA
AAAGGGAACAGTCCCTTAGATCTGTCTTGACCTCCCACTCCCGTGACTTT
GTTATTTCATCTGATGGAAGAAAGATATCTGTCTCAAAACTCGAAGGGAA
GACTATTGGTCTTTATTTCCCATGGTCTTCATATAAGGGAAGTGCTGAAT
TTTACTCAAAGGGTTGTGGAGGTAAATGAAAAAATGAAAGGAAAAGGGGG
AAAACTTCCAAAATTGTTTTTATCTCCCTCCATGAAGAAAGAAAAATCTT
TTTAACCAAAACTTAAGAAACCATGGCCTTGGGTAAGCTTTGCCCCTTTC
AGGGCAAAAAACCCGGGAAAAACCGGGGCCCGGTATTTTTAACTTTTCCC
CCCCCTCCCCCCTCGGGGGGATTAAAAGGCCCCAAAGGGGGAA
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