EY652380

Overview
NameEY652380
Unique NameEY652380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS24_ARATH (40S ribosomal protein S2-4 OS=Arabidopsis thaliana GN=RPS2D PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 6.924e-81
Identity = 119/144 (82.64%), Postives = 131/144 (90.97%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQ 725
            FKAF+VVGD++GHVGLGVKCSKEVATAIRGAIIL KLSV+P+RRGYWGNKIG+PH +PCKVTGKCGS TVRMVPAPRG+GIVAA VP KVLQFAGIDDVFTSSRGS KTLGN+V+ATF+CL KTYGF T +FW ETR   SPYQ
Sbjct:  109 FKAFIVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSKSPYQ 252

HSP 2 Score: 73.1738 bits (178), Expect = 6.924e-81
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            KWV V KLGRLV+EGKI  ++QIYLHSLP+KEY+IID L+   LKDEV
Sbjct:   44 KWVPVTKLGRLVKEGKITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEV 91
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS23_ARATH (40S ribosomal protein S2-3 OS=Arabidopsis thaliana GN=RPS2C PE=1 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 9.865e-80
Identity = 121/144 (84.03%), Postives = 130/144 (90.28%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQ 725
            FKAFVVVGD +GHVGLGVKCSKEVATAIRGAIIL KLSV+PVRRGYWGNKIG+PH +PCKVTGKCGS TVRMVPAPRG+GIVAA VP KVLQFAGIDDVFTSSRGS KTLGN+V+ATF+CL KTYGF T +FW ETR   SPYQ
Sbjct:  118 FKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQ 261

HSP 2 Score: 69.707 bits (169), Expect = 9.865e-80
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            KWV V KLGRLV  G IK ++QIYLHSLP+KEY+IID LI   LKDEV
Sbjct:   53 KWVPVTKLGRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEV 100
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS22_ARATH (40S ribosomal protein S2-2 OS=Arabidopsis thaliana GN=RPS2B PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 2.189e-79
Identity = 121/144 (84.03%), Postives = 130/144 (90.28%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQ 725
            FKAFVVVGD +GHVGLGVKCSKEVATAIRGAIIL KLSV+PVRRGYWGNKIG+PH +PCKVTGKCGS TVRMVPAPRG+GIVAA VP KVLQFAGIDDVFTSSRGS KTLGN+V+ATF+CL KTYGF T +FW ETR   SPYQ
Sbjct:  117 FKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQ 260

HSP 2 Score: 68.5514 bits (166), Expect = 2.189e-79
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            KWV V KLGRLV + KI  L+QIYLHSLP+KEY+IID L+   LKDEV
Sbjct:   52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEV 99
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS21_ARATH (40S ribosomal protein S2-1 OS=Arabidopsis thaliana GN=RPS2A PE=2 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 2.189e-79
Identity = 121/144 (84.03%), Postives = 130/144 (90.28%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQ 725
            FKAFVVVGD +GHVGLGVKCSKEVATAIRGAIIL KLSV+PVRRGYWGNKIG+PH +PCKVTGKCGS TVRMVPAPRG+GIVAA VP KVLQFAGIDDVFTSSRGS KTLGN+V+ATF+CL KTYGF T +FW ETR   SPYQ
Sbjct:  117 FKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQ 260

HSP 2 Score: 68.5514 bits (166), Expect = 2.189e-79
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            KWV V KLGRLV + KI  L+QIYLHSLP+KEY+IID L+   LKDEV
Sbjct:   52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEV 99
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS2_DROME (40S ribosomal protein S2 OS=Drosophila melanogaster GN=sop PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.042e-69
Identity = 98/149 (65.77%), Postives = 119/149 (79.87%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQSTQIF 740
            FKAFV +GD +GH+GLGVKCSKEVATAIRGAIIL KLSV+PVRRGYWGNKIG+PH +PCKVTGKCGS +VR++PAPRG GIV+A VP K+L  AGI+D +TS+RGS  TLGN+ +AT+  + KTY + T D W E     +PYQ+   F
Sbjct:  107 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDF 255

HSP 2 Score: 72.0182 bits (175), Expect = 4.042e-69
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            +WV V KLGRLVREGKIKSL++IYL+SLPIKE+EIID  +   LKDEV
Sbjct:   42 EWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEV 89
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS2_ICTPU (40S ribosomal protein S2 OS=Ictalurus punctatus GN=rps2 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 1.662e-67
Identity = 100/144 (69.44%), Postives = 117/144 (81.25%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQ 725
            FKAFV +GD +GHVGLGVKCSKEVATAIRGAIIL KLS+IPVRRGYWGNKIG+PH +PCKVTG+CGS  VR++PAPRG GIV+A VP K+L  AGIDD +TS+RG   TLGN+ +ATF+ + KTY + T D W ET    SPYQ
Sbjct:  109 FKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQ 252

HSP 2 Score: 63.929 bits (154), Expect = 1.662e-67
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            +WV V KLGRLV++ KIKSL++IYL+SLPIKE EIID  +   LKDEV
Sbjct:   44 EWVPVTKLGRLVKDMKIKSLEEIYLYSLPIKESEIIDFFLGSALKDEV 91
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS2_RAT (40S ribosomal protein S2 OS=Rattus norvegicus GN=Rps2 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.264e-67
Identity = 99/144 (68.75%), Postives = 117/144 (81.25%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQ 725
            FKAFV +GD +GHVGLGVKCSKEVATAIRGAIIL KLS++PVRRGYWGNKIG+PH +PCKVTG+CGS  VR++PAPRG GIV+A VP K+L  AGIDD +TS+RG   TLGN+ +ATF+ + KTY + T D W ET    SPYQ
Sbjct:  124 FKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQ 267

HSP 2 Score: 62.3882 bits (150), Expect = 6.264e-67
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            +W+ V KLGRLV++ KIKSL++IYL SLPIKE EIID  +   LKDEV
Sbjct:   59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEV 106
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS2_MOUSE (40S ribosomal protein S2 OS=Mus musculus GN=Rps2 PE=1 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 6.264e-67
Identity = 99/144 (68.75%), Postives = 117/144 (81.25%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQ 725
            FKAFV +GD +GHVGLGVKCSKEVATAIRGAIIL KLS++PVRRGYWGNKIG+PH +PCKVTG+CGS  VR++PAPRG GIV+A VP K+L  AGIDD +TS+RG   TLGN+ +ATF+ + KTY + T D W ET    SPYQ
Sbjct:  124 FKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQ 267

HSP 2 Score: 62.3882 bits (150), Expect = 6.264e-67
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            +W+ V KLGRLV++ KIKSL++IYL SLPIKE EIID  +   LKDEV
Sbjct:   59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEV 106
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS2_HUMAN (40S ribosomal protein S2 OS=Homo sapiens GN=RPS2 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 1.065e-66
Identity = 99/144 (68.75%), Postives = 117/144 (81.25%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQ 725
            FKAFV +GD +GHVGLGVKCSKEVATAIRGAIIL KLS++PVRRGYWGNKIG+PH +PCKVTG+CGS  VR++PAPRG GIV+A VP K+L  AGIDD +TS+RG   TLGN+ +ATF+ + KTY + T D W ET    SPYQ
Sbjct:  124 FKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQ 267

HSP 2 Score: 61.6178 bits (148), Expect = 1.065e-66
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            +W+ V KLGRLV++ KIKSL++IYL SLPIKE EIID  +   LKDEV
Sbjct:   59 EWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEV 106
[Close]
BLAST of EY652380 vs. ExPASy Swiss-Prot
Match: RS2_BOVIN (40S ribosomal protein S2 OS=Bos taurus GN=RPS2 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 1.065e-66
Identity = 99/144 (68.75%), Postives = 117/144 (81.25%), Query Frame = 3 
Query:  294 FKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILTKLSVIPVRRGYWGNKIGRPHILPCKVTGKCGSATVRMVPAPRGAGIVAAMVP*KVLQFAGIDDVFTSSRGSIKTLGNYVQATFECLLKTYGFPTTDFWMETRCVISPYQ 725
            FKAFV +GD +GHVGLGVKCSKEVATAIRGAIIL KLS++PVRRGYWGNKIG+PH +PCKVTG+CGS  VR++PAPRG GIV+A VP K+L  AGIDD +TS+RG   TLGN+ +ATF+ + KTY + T D W ET    SPYQ
Sbjct:  124 FKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQ 267

HSP 2 Score: 61.6178 bits (148), Expect = 1.065e-66
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 2 
Query:  152 KWVLVKKLGRLVREGKIKSLKQIYLHSLPIKEYEIIDTLIDHKLKDEV 295
            +W+ V KLGRLV++ KIKSL++IYL SLPIKE EIID  +   LKDEV
Sbjct:   59 EWLPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEV 106
The following BLAST results are available for this feature:
BLAST of EY652380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
RS24_ARATH6.924e-8182.6440S ribosomal protein S2-4 OS=Arabidopsis thaliana... [more]
RS23_ARATH9.865e-8084.0340S ribosomal protein S2-3 OS=Arabidopsis thaliana... [more]
RS22_ARATH2.189e-7984.0340S ribosomal protein S2-2 OS=Arabidopsis thaliana... [more]
RS21_ARATH2.189e-7984.0340S ribosomal protein S2-1 OS=Arabidopsis thaliana... [more]
RS2_DROME4.042e-6965.7740S ribosomal protein S2 OS=Drosophila melanogaste... [more]
RS2_ICTPU1.662e-6769.4440S ribosomal protein S2 OS=Ictalurus punctatus GN... [more]
RS2_RAT6.264e-6768.7540S ribosomal protein S2 OS=Rattus norvegicus GN=R... [more]
RS2_MOUSE6.264e-6768.7540S ribosomal protein S2 OS=Mus musculus GN=Rps2 P... [more]
RS2_HUMAN1.065e-6668.7540S ribosomal protein S2 OS=Homo sapiens GN=RPS2 P... [more]
RS2_BOVIN1.065e-6668.7540S ribosomal protein S2 OS=Bos taurus GN=RPS2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-032-F05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY652380 ID=EY652380; Name=EY652380; organism=Citrus sinensis; type=EST; length=928bp
CCACGCGTCCGGATCTGAAATTCCCTAACATCCAAAATGTCAAAAAGTGG
GCGAGCGTGGTGCATTCGGACGTGGCTTCTGCCGTGGTGGCCGCGGCGAC
CGTGGAGGCCCACGTGACCGTCACCGCGCTAGACGCAGAGAGGAAGAAGA
GAAGTGGGTCCTAGTCAAGAAACTCGGCCGTCTGGTGAGAGAAGGCAAGA
TCAAGAGCCTCAAGCAAATCTACCTCCACTCGCTCCCAATCAAAGAGTAT
GAAATCATCGACACGCTTATCGACCACAAATTGAAGGACGAGGTTCAAGG
CCTTCGTCGTCGTCGGTGACACGGACGGCCACGTGGGTCTTGGCGTTAAG
TGCTCCAAAGAGGTTGCCACTGCCATCCGTGGCGCTATCATATTGACGAA
GCTGTCGGTGATTCCGGTGAGAAGGGGTTACTGGGGTAACAAGATTGGGA
GGCCACACATCTTGCCGTGTAAGGTGACTGGTAAGTGTGGCAGTGCCACC
GTGAGGATGGTTCCGGCCCCACGTGGTGCCGGAATTGTGGCGGCTATGGT
TCCATAGAAGGTGCTGCAGTTTGCTGGTATTGACGATGTTTTCACATCTT
CTCGTGGGTCGATCAAGACTCTTGGAAACTATGTACAGGCTACCTTTGAG
TGTTTGTTGAAGACATATGGCTTCCCTACTACTGACTTCTGGATGGAGAC
TCGCTGTGTGATATCTCCATACCAGAGTACACAGATCTTTTGACTGCAAT
GCCTTCAGCAAGGCAGTCGTCACAAAAGTTGATTCAGTTGGGCCTTAGCT
ACTTATGGGTGCATGGAGAGGATAGCTTTAGAATGAAGGCATTTTGGCGA
CTTTATAGTATAGCTTGGTTGTACAGACTTATCTGCTCTTATGCTCGACG
ACTAGATTGTGCTTTGTGGGAAAATTGT
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