EY703489

Overview
NameEY703489
Unique NameEY703489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY703489 vs. ExPASy Swiss-Prot
Match: CAPZA_ARATH (F-actin-capping protein subunit alpha OS=Arabidopsis thaliana GN=At3g05520 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20
Identity = 80/272 (29.41%), Postives = 121/272 (44.49%), Query Frame = 2 
Query:   26 LNDNKMNAQAVSASYPIYYTST*FASERRQEPVYVLVTSFGERGDNEYGDLMTNVGAIMGHVKQVCTELRPASDDELSFACVEGLRSGMDVYIHKCGGEAYPKGVCSVLLHQRKRSGWTGIQF*ARKGDICMSTEPAXLV--GWK*ALNLAHSLPI*STTTRSKG*LLVGAHYFEYGNVQIDAQHECGHSTLYQDAQFSWILPQRW*LTSCTLKLIVGTFADDYCYFHHRLPLSP**HSDXXXXXXXXXXXXXXXXSKIVRRKLPVSKTLFP 835
            L+D ++  +A   ++P+Y  +     E       V+V+S+ E  +NEY D  T   AI+ HVKQ+CT++RPA+D+EL    +E  R  +D  I +   E+YPKG+ +V   + K +   G  F        M   P       W+   N+       S     KG L VGAHYFE GNV++DA+ +   ST++Q A              C + +            HH         ++                 K +RRKLPV++TLFP
Sbjct:   45 LSDEEVYNEAAMEAFPVYNKTHMICLEMPSGAGDVIVSSYSEINENEYLDPRTAQVAIVDHVKQICTKVRPANDEELPSLYIEEYRYALDAEIQRYVSESYPKGMSAVNCVKGKDNEGPGSDFELVVIITAMRLSPQNFCNGSWRSVWNI--DFQDESQVLDIKGKLQVGAHYFEEGNVELDAKKDFQDSTIFQSAD------------DCAIAIA-------NIIRHH--------ETEYLASLEVAYSKLPDNTFKDLRRKLPVTRTLFP 287
The following BLAST results are available for this feature:
BLAST of EY703489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CAPZA_ARATH1.085e-2029.41F-actin-capping protein subunit alpha OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-020-C11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703489 ID=EY703489; Name=EY703489; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGCTTAAGGAATGCATCTAAACGACAACAAAATGAACGCTC
AGGCTGTTTCTGCGTCGTATCCTATTTACTACACATCTACATGATTTGCC
TCCGAACGCCGGCAGGAGCCGGTGTATGTGTTGGTAACGTCATTCGGCGA
GCGTGGAGACAATGAGTATGGTGATCTTATGACCAACGTGGGTGCTATAA
TGGGCCATGTTAAACAAGTTTGTACAGAATTGAGACCTGCATCTGACGAT
GAACTTTCATTTGCTTGTGTTGAGGGATTACGGTCTGGTATGGATGTATA
CATACATAAATGTGGTGGTGAAGCTTATCCAAAAGGTGTCTGTTCAGTAT
TGTTGCACCAAAGGAAAAGAAGTGGATGGACCGGAATTCAATTTTGAGCT
CGTAAAGGAGATATCTGCATGTCTACTGAGCCCGCANAACTTGTGGGATG
GAAATAGGCGCTCAATCTGGCACATTCACTTCCAATATGAAGCACAACTA
CTAGAAGTAAAGGCTAATTGCTGGTGGGAGCCCATTATTTTGAATACGGC
AATGTGCAGATCGATGCACAACATGAATGTGGACATTCAACGCTATATCA
GGATGCACAATTCTCTTGGATACTTCCGCAGAGATGGTAATTAACATCTT
GCACATTGAAGCTCATTGTAGGAACATTCGCTGATGACTACTGCTATTTC
CATCATCGGCTTCCTTTGTCACCATGATGACATAGTGACTAGGCTTTGCT
TGAGGTGGCCTTAGTACAACTGGCCCACCTACATCATTCAAAGATCGTGC
GTAGGAAACTNCCAGTCTCAAAGACACTGTTTCCCTTGGCATAACACTGC
TAAAATAAACCTGCCACGAGCAATTATAAAAAACGTCGTGAATCGGAACC
GATGTTGCGCTGCCCAACCAAAGTCTTCT
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