EY703482

Overview
NameEY703482
Unique NameEY703482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_PARUW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=ispG PE=3 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 4.032e-74
Identity = 148/251 (58.96%), Postives = 177/251 (70.52%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTMLANLCMRAAELHQGVAPFDEKHRHYFDCQRRSGQLPIQ*EGEDVDYRXDLQRDGSIPMSGSLDQVK-APYY----CSGP 750
            NPGNF D+RA F Q+ Y D+ Y +E+E IEE F+PLVEKCK+  RA+RIGTNHGSLSDRIM+ YGD+P GMVESA EFARICRK D+HNF+FSMKASNP VM+QAYRLL   MY   WDYPLHLGVTEAGE EDG++KSA+GIG+LL DG+GDTIRVSLTE P  EI+PC  L  L   +A   QGVAPF E +R     +RR   L              + RDG++ +S  ++ +K A  Y    C GP
Sbjct:  118 NPGNFVDKRASFKQIVYDDESYAREIERIEEKFTPLVEKCKRLNRAMRIGTNHGSLSDRIMNRYGDTPFGMVESALEFARICRKNDYHNFLFSMKASNPQVMIQAYRLLTQAMYALEWDYPLHLGVTEAGEGEDGRIKSAMGIGSLLIDGIGDTIRVSLTEDPWHEINPCQRLIKLA--SAYQQQGVAPFIENYRQIEAIERRQVHL---------SSTVPMHRDGTVFISLPINMLKEASLYQQIGCEGP 357          
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBL (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ispG PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.303e-56
Identity = 111/174 (63.79%), Postives = 137/174 (78.74%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTMLA 534
            NPGNFAD++ +F   +YTD EY +ELE I  +FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA EF RI   L++++ V SMKASNP VMVQAYR+L +       DYPLHLGVTEAG+ +DG++KSAIGIG+LL+DGLGDTIRVSLTE P  EI    +LA
Sbjct:  117 NPGNFADKK-KFAVRDYTDSEYDEELERISAIFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLA 289          
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans GN=ispG PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.702e-56
Identity = 111/175 (63.43%), Postives = 137/175 (78.29%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTMLAN 537
            NPGNFAD++ +F   +YTD EY +ELE I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA EF RI   L +++ + SMKASNP VMVQAYR+L +       DYPLHLGVTEAG+  DG++KSAIGIG+LL+DGLGDTIRVSLTE P  E+    +LA+
Sbjct:  117 NPGNFADKK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLAD 290          
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBJ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ispG PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.903e-56
Identity = 111/174 (63.79%), Postives = 136/174 (78.16%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTMLA 534
            NPGNFAD++ +F   +YTD EY +ELE I   FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA EF RI   L++++ V SMKASNP VMVQAYR+L +       DYPLHLGVTEAG+ +DG++KSAIGIG+LL+DGLGDTIRVSLTE P  EI    +LA
Sbjct:  117 NPGNFADKK-KFAVRDYTDSEYDEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLA 289          
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ispG PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.952e-56
Identity = 110/175 (62.86%), Postives = 137/175 (78.29%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTMLAN 537
            NPGNFAD++ +F   +YTD +Y +ELE I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA EF RI   L +++ + SMKASNP VMVQAYR+L +       DYPLHLGVTEAG+  DG++KSAIGIG+LL+DGLGDTIRVSLTE P  E+    +LA+
Sbjct:  117 NPGNFADKK-KFAVRDYTDLKYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLAD 290          
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_AKKM8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=ispG PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.458e-55
Identity = 107/177 (60.45%), Postives = 140/177 (79.10%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTMLAN 537
            NPGNF D++ +F   EY+D EY++EL+ ++E F+PLV  C+++GRA+RIG+NHGSLSDRI++ +GD+P GMVESA EFA+I R LD+H+ VFSMKASN  VMV AYRLLV  M   G  W+YP+HLGVTEAG  EDG++KSA+GIG+LL DG+GDT+RVSLTE   +E+     L+N
Sbjct:  117 NPGNFVDKK-KFEVREYSDAEYREELDRLKEEFTPLVLFCREHGRAMRIGSNHGSLSDRILNRFGDTPEGMVESAIEFAQIARDLDYHSLVFSMKASNVKVMVAAYRLLVERMNALGPDWNYPIHLGVTEAGGGEDGRIKSAVGIGSLLTDGIGDTLRVSLTEDAVREVPVAYRLSN 292          
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_CHLMU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia muridarum GN=ispG PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.717e-54
Identity = 107/210 (50.95%), Postives = 135/210 (64.29%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTMLANLCMRAAELHQGVAPFDEKHRHYFDCQRRSGQLPIQ 642
            NPGN+ D+R  F    Y+D++Y + LE + E FSPLV KCK+ GRA+RIG NHGSLS+RIM  YGD+  GMV SA E+A +C  +D+HN VFSMK+SNP  MV AYR L  E+    W YPLHLGVTEAG   DG +KS++GIGTLL +GLGDTIR SLT  P  EI  C  L     + ++  +   PF+  H      Q      P++
Sbjct:  114 NPGNYVDKRNMFSGKIYSDEQYTRSLERLFEKFSPLVAKCKRLGRAMRIGVNHGSLSERIMQRYGDTIEGMVFSALEYAEVCVNMDYHNIVFSMKSSNPRTMVAAYRALARELDQRKWLYPLHLGVTEAGSGMDGMIKSSVGIGTLLSEGLGDTIRCSLTGSPTLEIPVCLDLLKETAKYSKSTKKYNPFEIYHSKQLTTQTTPKHFPVE 323          
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_PARD8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ispG PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 7.906e-54
Identity = 108/187 (57.75%), Postives = 132/187 (70.59%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTMLANLCMRAAELHQGV 573
            NPGN+ D+   F  LEYTD+EY  E+E I E F P +  CK +G A+RIG NHGSLSDRIMS YGD+P GMV S  EF RICR+ +F + V S+KASN VVMV+  RLLV  M      YPLHLGVTEAG+ EDG++KSA+GIGTLL DG+GDTIRVSL+E PE E+     L +  +R  E H+ +
Sbjct:  111 NPGNYVDKVKTFSHLEYTDEEYAAEIEKIRERFVPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCMEFLRICREENFPDVVISIKASNTVVMVRTVRLLVRTMEAENMHYPLHLGVTEAGDGEDGRIKSAVGIGTLLCDGIGDTIRVSLSEDPEAEMPVARKLVDY-IRERENHRPI 296          
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_BACV8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ispG PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.349e-53
Identity = 120/251 (47.81%), Postives = 154/251 (61.35%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTMLANLCMRAAELHQGVAPFDEKHRHYFDCQRRSGQLPIQ*EGEDVDYRXDLQRDGSIPMSGSLDQVKAPY-YCSGPLHQN 762
            NPGN+ D    F +LEYTD+EY +E+E I   F P +  CK+   A+RIG NHGSLSDRIMS+YGD+P GMVES  EF RIC    F++ V S+KASN VVMV+  RLLV EM   G  +PLHLGVTEAG+ EDG++KSA+GIG LL DGLGDTIRVSL+E PE EI     L +  +   E H  +   +    +Y    RR  +      G+++      + +GS   +    Q K  Y YC G + Q+
Sbjct:  111 NPGNYVDPGRTFQKLEYTDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCMEFLRICVAEHFNDVVISIKASNTVVMVRTVRLLVKEMEKEGMAFPLHLGVTEAGDGEDGRIKSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVDYIL-TREGHPFIPGKEAPQFNYLSPGRRKTKAVRNIGGDNLPVVIAERLEGSFETN---PQFKPDYIYCGGSVPQS 357          
BLAST of EY703482 vs. ExPASy Swiss-Prot
Match: ISPG_CHLFF (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila felis (strain Fe/C-56) GN=ispG PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.741e-53
Identity = 103/173 (59.54%), Postives = 122/173 (70.52%), Query Frame = 1
Query:   13 NPGNFADRRAQFHQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEREDGQMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCTML 531
            NPGNF D+R  F    YTD  Y   L  +EE FSPLVEKCK+ G+A+RIG NHGSLS+RIM  YGD+  GMV SA E+ ++C  L + + VFSMK+SNP VMV AYR L  ++   GW YPLHLGVTEAG   DG +KSA+GIGTLL +GLGDTIR SLT  P +EI  C  L
Sbjct:  115 NPGNFVDKRNMFSGKTYTDKNYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERIMQRYGDTIEGMVVSALEYIKVCENLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMDGIIKSAVGIGTLLTEGLGDTIRCSLTGCPTEEIPVCESL 287          
The following BLAST results are available for this feature:
BLAST of EY703482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
ISPG_PARUW4.032e-7458.964-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPBL1.303e-5663.794-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPIN1.702e-5663.434-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPBJ2.903e-5663.794-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LEPIC4.952e-5662.864-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_AKKM82.458e-5560.454-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLMU2.717e-5450.954-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PARD87.906e-5457.754-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACV81.349e-5347.814-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLFF8.741e-5359.544-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-020-C03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703482 ID=EY703482; Name=EY703482; organism=Citrus sinensis; type=EST; length=964bp
CCACGCGTCCGCAACCCAGGAAATTTTGCTGATAGACGGGCTCAGTTTCA
TCAGCTAGAGTACACAGACGATGAGTATCAGAAAGAACTTGAGCATATTG
AGGAGGTTTTTAGTCCATTGGTTGAGAAATGTAAAAAGTACGGAAGGGCA
GTGCGTATTGGGACTAACCATGGGAGCCTTTCAGATCGTATCATGAGCTA
CTATGGGGATTCTCCTAGGGGAATGGTTGAATCTGCCTTTGAGTTTGCAA
GAATCTGCCGGAAATTGGACTTCCATAATTTTGTCTTTTCAATGAAAGCA
AGCAACCCAGTCGTAATGGTCCAAGCATACCGTCTGCTTGTAGCTGAAAT
GTATGTTCATGGTTGGGATTACCCATTACATTTGGGAGTGACTGAAGCTG
GAGAACGTGAAGATGGTCAGATGAAATCTGCTATTGGAATTGGTACCCTT
CTTCAAGATGGTTTGGGTGATACAATCAGGGTTTCACTTACGGAACCACC
AGAAAAGGAGATTGACCCTTGCACAATGTTGGCCAACCTGTGTATGAGAG
CAGCTGAGCTTCATCAAGGAGTGGCACCATTTGACGAAAAGCACAGGCAT
TATTTTGATTGTCAGCGTCGGTCTGGTCAACTGCCAATTCAATAAGAAGG
TGAGGACGTGGATTACAGANGTGATCTGCAACGTGATGGGTCAATCCCTA
TGTCCGGTTCTTTGGATCAGGTGAAGGCCCCGTATTACTGTTCAGGACCC
TTGCACCAAAACTAGTTCTTGGATTGCCGTGAACGGTCTATGCACATCCA
TTCAATCTTTTAAGAAAACTTCCGCTATTGCAAAATATGGACCTTTTTTA
TTTTAGACAGTTGGGGAATTATATTTGGGAAGTTTACCACATTTTTTGAA
CATAATAAAGGCGCGGCCCCACGCAGAGTTTCGTAGACACTCAGAGTAAT
TATTGGGGCATACA
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