EY703481

Overview
NameEY703481
Unique NameEY703481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.229e-30
Identity = 79/153 (51.63%), Postives = 97/153 (63.40%), Query Frame = 3
Query:   54 MATSTMALSSS-FVGKAVNLAPSRNELSNGGAFSLRKTGTCF--FFLRYPVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MATSTMALSSS F GKAV L+PS +E++  G  ++RKT T         P   P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+    +WAMLGALGCVFPELLA+NGVKFG+  W K G +I + GGL  LG P+
Sbjct:    1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152          
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.101e-30
Identity = 77/153 (50.33%), Postives = 97/153 (63.40%), Query Frame = 3
Query:   54 MATSTMALSS-SFVGKAVNLAPSRNELSNGGAFSLRKTGTCFFFLRY--PVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MA STMALSS SF GKAV L+PS +E++  G  ++RKT +    +    P   P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+    +WAMLGALGCVFPELLA+NGVKFG+  W K G +I + GGL  LG P+
Sbjct:    1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152          
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.968e-30
Identity = 78/153 (50.98%), Postives = 97/153 (63.40%), Query Frame = 3
Query:   54 MATSTMALSSS-FVGKAVNLAPSRNELSNGGAFSLRKTGTCFFFLRY--PVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MA +TMALSSS F GKAV L+PS +E++  G  ++RKT T    L    P   P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+    +WAMLGALGCVFPELLA+NGVKFG+  W K G +I + GGL  LG P+
Sbjct:    1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152          
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.968e-30
Identity = 76/151 (50.33%), Postives = 94/151 (62.25%), Query Frame = 3
Query:   54 MATSTMALSS-SFVGKAVNLAPSRNELSNGGAFSLRKTGTCFFFLRYPVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MA +TMALSS SF G+AV L+PS  E++  G  S+RKT         P   P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+    +WAMLGALGCVFPELLA+NGVKFG+  W K G +I + GGL  LG P+
Sbjct:    1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150          
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.041e-29
Identity = 77/153 (50.33%), Postives = 97/153 (63.40%), Query Frame = 3
Query:   54 MATSTMALSSS-FVGKAVNLAPSRNELSNGGAFSLRKTGTCF--FFLRYPVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MA STMALSSS F GKAV L+PS +E++  G  ++RKT +         P   P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+    +WAMLGALGCVFPELLA+NGVKFG+  W K G +I ++GGL  LG P+
Sbjct:    1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPS 152          
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.041e-29
Identity = 75/152 (49.34%), Postives = 95/152 (62.50%), Query Frame = 3
Query:   54 MATSTMALSSSFVGKAVNLAPSRNELSNGGAFSLRKTGTCFFFLRY--PVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MA ST ALSS F GKAV L+PS +E++  G  ++RKT +    +    P   P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+    +WAMLGALGCVFPELLA+NGVKFG+  W K G +I + GGL  LG P+
Sbjct:    1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151          
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.359e-29
Identity = 75/151 (49.67%), Postives = 94/151 (62.25%), Query Frame = 3
Query:   54 MATSTMALSS-SFVGKAVNLAPSRNELSNGGAFSLRKTGTCFFFLRYPVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MA +TMALSS SF G+AV L+PS +E+S  G  ++RK          P   P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+    +WAMLGALGCVFPELLA+NGVKFG+  W K G +I + GGL  LG P+
Sbjct:    1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150          
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.359e-29
Identity = 75/152 (49.34%), Postives = 94/152 (61.84%), Query Frame = 3
Query:   54 MATSTMALSSSFVGKAVNLAPSRNELSNGGAFSLRKTGTCFFFLRY--PVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MA ST ALSS F GKAV L+PS +E++  G  ++RKT      +    P   P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+    +WAMLGALGCVFPELLA+NGVKFG+  W K G +I + GGL  LG P+
Sbjct:    1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151          
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.028e-29
Identity = 76/153 (49.67%), Postives = 96/153 (62.75%), Query Frame = 3
Query:   54 MATSTMALSSS-FVGKAVNLAPSRNELSNGGAFSLRKTGTCFFFLRY--PVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MA +TMALSSS F GK V L+PS +E++  G  ++RKT T    +    P   P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+    +WAMLGALGCVFPEL A+NGVKFG+  WLK G +I + GGL  LG P+
Sbjct:    1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPS 152          
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.954e-29
Identity = 78/156 (50.00%), Postives = 97/156 (62.18%), Query Frame = 3
Query:   54 MATSTMALSS-SFVGKAVNLAPSRNELSNGGAFSLRKTGTCFFFLRYPVVP-----PGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500
            MA STMALSS +  GKAV +APS +EL   G  S+RKT      ++ PV       P ++K+LG      P  L    P    + T  GLS DPETFA+NREL+   ++WAMLGALGCVFPELLA+NGVKFG+  W K G +I + GGL  LG P+
Sbjct:    1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKT------VKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 149          
The following BLAST results are available for this feature:
BLAST of EY703481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
CB2G_SOLLC1.229e-3051.63Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB24_TOBAC6.101e-3050.33Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB25_TOBAC7.968e-3050.98Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB22_TOBAC7.968e-3050.33Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB23_NICPL1.041e-2950.33Chlorophyll a-b binding protein C, chloroplastic O... [more]
CB21_TOBAC1.041e-2949.34Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2B_SOLLC1.359e-2949.67Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB25_NICPL1.359e-2949.34Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB22_PETSP3.028e-2949.67Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB23_APIGR3.954e-2950.00Chlorophyll a-b binding protein, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-020-C02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703481 ID=EY703481; Name=EY703481; organism=Citrus sinensis; type=EST; length=813bp
CCACGCGTCCGCTTCTAACACTATAGCTCACCAACAACTCTGATCATTGT
AAAATGGCAACCTCAACCATGGCTCTCTCCTCATCATTCGTCGGCAAGGC
TGTGAACCTTGCCCCTTCACGCAATGAGCTGAGCAATGGTGGCGCATTCT
CCTTGCGTAAAACCGGGACATGTTTTTTTTTCTTAAGGTACCCGGTGGTC
CCGCCCGGAAAGATTAAATTTCTTGGGTCCATTCTCTGGCGACCCCCCAA
GCTACTTGACTGGTGAGTTCCCTGGTGACTACCGTTCGGGACACTGCTGG
GCCTTTCACCTGACCCAGAAACCTTTGCCAGGAACCGTGAACTCAAATTC
TTCCCTGCAAAATGGGCCATGTTGGGAGCTCTTGGATGCGTTTTTCCGGA
ACTTCTGGCCCAAAACGGGGTAAAATTTGGTAAGGGCCGTTGGTTAAAGG
TGGGGCCCAAAATTTTAACGAGGGGGGGCTTAATCCTTGGGAAACCAAAC
TGGTGCCCCCCAAAGAATTTTGGGCATTTTGGCTTTCTCGGGGTTTTTGG
GGGAACACCTTGGGGTAAAAAATATTTTTAGGGCCCCCCTGGAAAAAAAT
CCCCCCATTTTCCCCCCGGGGGAAACTTTATACTTTTGTTTTTGTAATAA
CACACGGGCTTTTTNCTCGCCCACGAGGGTGGGAAAAAAAAAAATGGGGG
GGGGTGTTTCCTCCCTCCTCGTGGGGAATGAACCCGACTTTTTCCCCCCG
GGAGAGACGTTCTTAATAAATACTGCCCTCCTTATGGAGACATCTTATAA
AAAATAGGCGGGG
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